RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 DHX29Q7Z478 1369 aaKnown RBP16.1■□□□□ 0.17
MDC1-202ENST00000416571 CCDC141Q6ZP82 1450 aa16.09■□□□□ 0.17
MDC1-202ENST00000416571 KIF3BO15066 747 aa16.08■□□□□ 0.16
MDC1-202ENST00000416571 KDM5DQ9BY66 1539 aa16.08■□□□□ 0.16
MDC1-202ENST00000416571 FAM135AQ9P2D6 1515 aa16.08■□□□□ 0.16
MDC1-202ENST00000416571 TNRQ92752 1358 aa16.07■□□□□ 0.16
MDC1-202ENST00000416571 CAMSAP2Q08AD1 1489 aa16.06■□□□□ 0.16
MDC1-202ENST00000416571 SCAF1Q9H7N4 1312 aaKnown RBP16.06■□□□□ 0.16
MDC1-202ENST00000416571 PZPP20742 1482 aa16.05■□□□□ 0.16
MDC1-202ENST00000416571 WASHC2CQ9Y4E1 1318 aa16.05■□□□□ 0.16
MDC1-202ENST00000416571 RSPH4AQ5TD94 716 aa16.05■□□□□ 0.16
MDC1-202ENST00000416571 NCOA2Q15596 1464 aa16.04■□□□□ 0.16
MDC1-202ENST00000416571 FBXO31Q5XUX0 539 aaPredicted RBP16.04■□□□□ 0.16
MDC1-202ENST00000416571 CPS1P31327 1500 aa16.04■□□□□ 0.16
MDC1-202ENST00000416571 NEURL4Q96JN8 1562 aa16.02■□□□□ 0.16
MDC1-202ENST00000416571 TOM1O60784 492 aa16.01■□□□□ 0.15
MDC1-202ENST00000416571 TSPY4P0CV99 314 aa16.01■□□□□ 0.15
MDC1-202ENST00000416571 TSPY10P0CW01 314 aa16.01■□□□□ 0.15
MDC1-202ENST00000416571 ANKLE2Q86XL3 938 aa16.01■□□□□ 0.15
MDC1-202ENST00000416571 THEMISQ8N1K5 641 aaPredicted RBP16.01■□□□□ 0.15
MDC1-202ENST00000416571 NLRP1Q9C000 1473 aa16■□□□□ 0.15
MDC1-202ENST00000416571 SHANK2Q9UPX8 1470 aa16■□□□□ 0.15
MDC1-202ENST00000416571 PIP4K2BP78356 416 aa16■□□□□ 0.15
MDC1-202ENST00000416571 ARHGEF5Q12774 1597 aa16■□□□□ 0.15
MDC1-202ENST00000416571 UGGT1Q9NYU2 1555 aa16■□□□□ 0.15
MDC1-202ENST00000416571 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16■□□□□ 0.15
MDC1-202ENST00000416571 MIA2Q96PC5 1412 aa15.99■□□□□ 0.15
MDC1-202ENST00000416571 PHF23Q9BUL5 403 aaPredicted RBP15.97■□□□□ 0.15
MDC1-202ENST00000416571 ZC3H13Q5T200 1668 aaKnown RBP15.96■□□□□ 0.15
MDC1-202ENST00000416571 HSPA1LP34931 641 aa15.96■□□□□ 0.15
MDC1-202ENST00000416571 DEPDC5O75140 1603 aa15.96■□□□□ 0.15
MDC1-202ENST00000416571 NPHP4O75161 1426 aaPredicted RBP15.95■□□□□ 0.14
MDC1-202ENST00000416571 VWDEQ8N2E2 1590 aa15.95■□□□□ 0.14
MDC1-202ENST00000416571 IQGAP1P46940 1657 aa15.95■□□□□ 0.14
MDC1-202ENST00000416571 RNF17Q9BXT8 1623 aaKnown RBP15.94■□□□□ 0.14
MDC1-202ENST00000416571 MED14O60244 1454 aa15.94■□□□□ 0.14
MDC1-202ENST00000416571 EIF2AK4Q9P2K8 1649 aaKnown RBP15.93■□□□□ 0.14
MDC1-202ENST00000416571 MAST1Q9Y2H9 1570 aa15.92■□□□□ 0.14
MDC1-202ENST00000416571 ABCC3O15438 1527 aa15.92■□□□□ 0.14
MDC1-202ENST00000416571 LRRC9Q6ZRR7 1453 aa15.91■□□□□ 0.14
MDC1-202ENST00000416571 CEP152O94986 1710 aa15.89■□□□□ 0.13
MDC1-202ENST00000416571 VPS8Q8N3P4 1428 aa15.89■□□□□ 0.13
MDC1-202ENST00000416571 ERVK-7P63135 1459 aa15.89■□□□□ 0.13
MDC1-202ENST00000416571 SYNMO15061 1565 aa15.88■□□□□ 0.13
MDC1-202ENST00000416571 CFAP65Q6ZU64 1925 aaKnown RBP15.88■□□□□ 0.13
MDC1-202ENST00000416571 UBR1Q8IWV7 1749 aa15.85■□□□□ 0.13
MDC1-202ENST00000416571 STRCP1A6NGW2 1772 aa15.85■□□□□ 0.13
MDC1-202ENST00000416571 LRRC7Q96NW7 1537 aa15.85■□□□□ 0.13
MDC1-202ENST00000416571 DUOX2Q9NRD8 1548 aa15.85■□□□□ 0.13
MDC1-202ENST00000416571 MROH1Q8NDA8 1641 aa15.85■□□□□ 0.13
MDC1-202ENST00000416571 MYOM3Q5VTT5 1437 aa15.85■□□□□ 0.13
MDC1-202ENST00000416571 SENP3Q9H4L4 574 aaPredicted RBP15.84■□□□□ 0.13
MDC1-202ENST00000416571 ALKQ9UM73 1620 aa15.83■□□□□ 0.13
MDC1-202ENST00000416571 SCAF11Q99590 1463 aaKnown RBP15.83■□□□□ 0.12
MDC1-202ENST00000416571 MAP3K1Q13233 1512 aa15.82■□□□□ 0.12
MDC1-202ENST00000416571 KANK4Q5T7N3 995 aaPredicted RBP15.81■□□□□ 0.12
MDC1-202ENST00000416571 PRDM15P57071 1507 aaPredicted RBP15.8■□□□□ 0.12
MDC1-202ENST00000416571 EID1Q9Y6B2 187 aa15.8■□□□□ 0.12
MDC1-202ENST00000416571 CROCC2H7BZ55 1655 aa15.79■□□□□ 0.12
MDC1-202ENST00000416571 ERBINQ96RT1 1412 aa15.79■□□□□ 0.12
MDC1-202ENST00000416571 KIF15Q9NS87 1388 aa15.79■□□□□ 0.12
MDC1-202ENST00000416571 TXNDC2Q86VQ3 553 aa15.79■□□□□ 0.12
MDC1-202ENST00000416571 SLIT1O75093 1534 aa15.78■□□□□ 0.12
MDC1-202ENST00000416571 STAG3Q9UJ98 1225 aa15.78■□□□□ 0.12
MDC1-202ENST00000416571 ARHGAP23Q9P227 1491 aa15.78■□□□□ 0.12
MDC1-202ENST00000416571 ARHGAP31Q2M1Z3 1444 aa15.77■□□□□ 0.12
MDC1-202ENST00000416571 KANK1Q14678 1352 aa15.77■□□□□ 0.12
MDC1-202ENST00000416571 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.77■□□□□ 0.122e-7■■□□□ 13.4
MDC1-202ENST00000416571 PIK3C2BO00750 1634 aa15.76■□□□□ 0.11
MDC1-202ENST00000416571 LOC105371045A0A1W2PR82 267 aa15.76■□□□□ 0.11
MDC1-202ENST00000416571 LTKP29376 864 aa15.76■□□□□ 0.11
MDC1-202ENST00000416571 APLP2Q06481 763 aa15.76■□□□□ 0.11
MDC1-202ENST00000416571 RRP7BPQ9NSQ0 103 aa15.76■□□□□ 0.11
MDC1-202ENST00000416571 PTPN23Q9H3S7 1636 aa15.76■□□□□ 0.11
MDC1-202ENST00000416571 SRCAPQ6ZRS2 3230 aa15.74■□□□□ 0.11
MDC1-202ENST00000416571 XIRP1Q702N8 1843 aaKnown RBP15.74■□□□□ 0.11
MDC1-202ENST00000416571 ABCC5O15440 1437 aa15.74■□□□□ 0.11
MDC1-202ENST00000416571 DAPK1P53355 1430 aa15.72■□□□□ 0.11
MDC1-202ENST00000416571 KDM5AP29375 1690 aaKnown RBP15.72■□□□□ 0.11
MDC1-202ENST00000416571 EFCAB6Q5THR3 1501 aa15.72■□□□□ 0.11
MDC1-202ENST00000416571 TMEM2Q9UHN6 1383 aa15.72■□□□□ 0.11
MDC1-202ENST00000416571 RGS17Q9UGC6 210 aaPredicted RBP15.71■□□□□ 0.11
MDC1-202ENST00000416571 ANKRD30AQ9BXX3 1397 aa15.69■□□□□ 0.1
MDC1-202ENST00000416571 LMTK2Q8IWU2 1503 aa15.68■□□□□ 0.1
MDC1-202ENST00000416571 FGD6Q6ZV73 1430 aa15.68■□□□□ 0.1
MDC1-202ENST00000416571 TMEM94Q12767 1356 aa15.67■□□□□ 0.1
MDC1-202ENST00000416571 IDI1Q13907 227 aa15.67■□□□□ 0.1
MDC1-202ENST00000416571 CHIC2Q9UKJ5 165 aa15.67■□□□□ 0.1
MDC1-202ENST00000416571 BCANQ96GW7 911 aa15.66■□□□□ 0.1
MDC1-202ENST00000416571 FAM135BQ49AJ0 1406 aa15.66■□□□□ 0.1
MDC1-202ENST00000416571 ADGRB3O60242 1522 aa15.65■□□□□ 0.1
MDC1-202ENST00000416571 KCNA6P17658 529 aa15.65■□□□□ 0.1
MDC1-202ENST00000416571 PROSER2Q86WR7 435 aaPredicted RBP15.65■□□□□ 0.1
MDC1-202ENST00000416571 SLC26A8Q96RN1 970 aa15.65■□□□□ 0.1
MDC1-202ENST00000416571 ROBO1Q9Y6N7 1651 aa15.64■□□□□ 0.09
MDC1-202ENST00000416571 NKTRP30414 1462 aaKnown RBP15.63■□□□□ 0.09
MDC1-202ENST00000416571 TET3O43151 1660 aa15.63■□□□□ 0.09
MDC1-202ENST00000416571 SETD1AO15047 1707 aaKnown RBP15.63■□□□□ 0.09
MDC1-202ENST00000416571 SLC52A1Q9NWF4 448 aa15.62■□□□□ 0.09
MDC1-202ENST00000416571 NOS1P29475 1434 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms