RNA–Protein interactions for RNA: ENST00000416162.6

MEST-206, mesoderm specific transcript, humanhuman

TSL 1 (best) BASIC

Gene MEST, Length 2,158 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEST-206ENST00000416162 PTPN23Q9H3S7 1636 aa18.49■□□□□ 0.55
MEST-206ENST00000416162 DIP2CQ9Y2E4 1556 aa18.48■□□□□ 0.55
MEST-206ENST00000416162 FYCO1Q9BQS8 1478 aa18.48■□□□□ 0.55
MEST-206ENST00000416162 C3P01024 1663 aa18.47■□□□□ 0.55
MEST-206ENST00000416162 PTPRTO14522 1441 aa18.47■□□□□ 0.55
MEST-206ENST00000416162 SMG6Q86US8 1419 aaKnown RBP18.46■□□□□ 0.55
MEST-206ENST00000416162 ARHGAP5Q13017 1502 aa18.46■□□□□ 0.55
MEST-206ENST00000416162 UBE2Q2Q8WVN8 375 aa18.46■□□□□ 0.55
MEST-206ENST00000416162 ZBTB47Q9UFB7 747 aaPredicted RBP18.46■□□□□ 0.55
MEST-206ENST00000416162 SALL2Q9Y467 1007 aaPredicted RBP18.46■□□□□ 0.55
MEST-206ENST00000416162 TROQ12816 1431 aaPredicted RBP18.46■□□□□ 0.55
MEST-206ENST00000416162 RNF123Q5XPI4 1314 aa18.45■□□□□ 0.54
MEST-206ENST00000416162 CDC42BPBQ9Y5S2 1711 aa18.45■□□□□ 0.54
MEST-206ENST00000416162 USP35Q9P2H5 1018 aa18.45■□□□□ 0.54
MEST-206ENST00000416162 AGLP35573 1532 aa18.45■□□□□ 0.54
MEST-206ENST00000416162 MLH3Q9UHC1 1453 aa18.44■□□□□ 0.54
MEST-206ENST00000416162 POLR1AO95602 1720 aaPredicted RBP18.44■□□□□ 0.54
MEST-206ENST00000416162 ABCA6Q8N139 1617 aa18.43■□□□□ 0.54
MEST-206ENST00000416162 CEBPAP49715 358 aaPredicted RBP18.43■□□□□ 0.54
MEST-206ENST00000416162 FGD6Q6ZV73 1430 aa18.43■□□□□ 0.54
MEST-206ENST00000416162 IQSEC2Q5JU85 1478 aa18.42■□□□□ 0.54
MEST-206ENST00000416162 LRRIQ1Q96JM4 1722 aa18.42■□□□□ 0.54
MEST-206ENST00000416162 C11orf95C9JLR9 678 aaPredicted RBP18.42■□□□□ 0.54
MEST-206ENST00000416162 DISP3Q9P2K9 1392 aa18.42■□□□□ 0.54
MEST-206ENST00000416162 PREX2Q70Z35 1606 aa18.41■□□□□ 0.54
MEST-206ENST00000416162 ITSN2Q9NZM3 1697 aa18.41■□□□□ 0.54
MEST-206ENST00000416162 PRKRIP1Q9H875 184 aaPredicted RBP18.41■□□□□ 0.54
MEST-206ENST00000416162 NCOA1Q15788 1441 aa18.4■□□□□ 0.54
MEST-206ENST00000416162 CASKIN1Q8WXD9 1431 aa18.39■□□□□ 0.54
MEST-206ENST00000416162 SOCS7O14512 581 aa18.39■□□□□ 0.53
MEST-206ENST00000416162 HSPA5P11021 654 aaKnown RBP18.39■□□□□ 0.53
MEST-206ENST00000416162 SPATA31D1Q6ZQQ2 1576 aa18.39■□□□□ 0.53
MEST-206ENST00000416162 MROH2AA6NES4 1674 aa18.38■□□□□ 0.53
MEST-206ENST00000416162 ABCC1P33527 1531 aa18.38■□□□□ 0.53
MEST-206ENST00000416162 AFAP1Q8N556 730 aa18.38■□□□□ 0.53
MEST-206ENST00000416162 ATP1B4Q9UN42 357 aaPredicted RBP18.37■□□□□ 0.53
MEST-206ENST00000416162 LTBP4Q8N2S1 1624 aa18.37■□□□□ 0.53
MEST-206ENST00000416162 TRAPPC8Q9Y2L5 1435 aa18.37■□□□□ 0.53
MEST-206ENST00000416162 EIF4G2P78344 907 aaKnown RBP eCLIP18.37■□□□□ 0.53
MEST-206ENST00000416162 NAIPQ13075 1403 aa18.36■□□□□ 0.53
MEST-206ENST00000416162 WASHC2CQ9Y4E1 1318 aa18.36■□□□□ 0.53
MEST-206ENST00000416162 KIDINS220Q9ULH0 1771 aa18.36■□□□□ 0.53
MEST-206ENST00000416162 CCDC184Q52MB2 194 aa18.35■□□□□ 0.53
MEST-206ENST00000416162 CCDC7Q96M83 1385 aa18.35■□□□□ 0.53
MEST-206ENST00000416162 IL27Q8NEV9 243 aa18.35■□□□□ 0.53
MEST-206ENST00000416162 ILDR2Q71H61 639 aa18.34■□□□□ 0.53
MEST-206ENST00000416162 MRS2Q9HD23 443 aa18.34■□□□□ 0.53
MEST-206ENST00000416162 ESF1Q9H501 851 aaKnown RBP18.34■□□□□ 0.53
MEST-206ENST00000416162 CDC42BPAQ5VT25 1732 aa18.33■□□□□ 0.53
MEST-206ENST00000416162 CCDC136Q96JN2 1154 aa18.33■□□□□ 0.52
MEST-206ENST00000416162 NPATQ14207 1427 aa18.32■□□□□ 0.52
MEST-206ENST00000416162 FAM9BQ8IZU0 186 aa18.31■□□□□ 0.52
MEST-206ENST00000416162 NUDCQ9Y266 331 aa18.31■□□□□ 0.52
MEST-206ENST00000416162 GCC2Q8IWJ2 1684 aa18.31■□□□□ 0.52
MEST-206ENST00000416162 PTPRKQ15262 1439 aa18.31■□□□□ 0.52
MEST-206ENST00000416162 EIF5BO60841 1220 aaKnown RBP18.28■□□□□ 0.52
MEST-206ENST00000416162 PPM1GO15355 546 aaPredicted RBP18.28■□□□□ 0.52
MEST-206ENST00000416162 ZNF142P52746 1687 aaPredicted RBP18.27■□□□□ 0.52
MEST-206ENST00000416162 CAMSAP1Q5T5Y3 1602 aa18.27■□□□□ 0.52
MEST-206ENST00000416162 SAMD9LQ8IVG5 1584 aa18.27■□□□□ 0.51
MEST-206ENST00000416162 SUPT6HQ7KZ85 1726 aaKnown RBP18.25■□□□□ 0.51
MEST-206ENST00000416162 TCERG1O14776 1098 aaKnown RBP18.24■□□□□ 0.51
MEST-206ENST00000416162 MYOM3Q5VTT5 1437 aa18.23■□□□□ 0.51
MEST-206ENST00000416162 DAXXQ9UER7 740 aaPredicted RBP18.23■□□□□ 0.51
MEST-206ENST00000416162 PLA2R1Q13018 1463 aa18.22■□□□□ 0.51
MEST-206ENST00000416162 CLTCQ00610 1675 aaKnown RBP18.21■□□□□ 0.51
MEST-206ENST00000416162 MYO3AQ8NEV4 1616 aa18.21■□□□□ 0.51
MEST-206ENST00000416162 NEFMP07197 916 aa18.21■□□□□ 0.51
MEST-206ENST00000416162 MS4A1P11836 297 aa18.21■□□□□ 0.51
MEST-206ENST00000416162 SPATA31E1Q6ZUB1 1445 aa18.21■□□□□ 0.5
MEST-206ENST00000416162 PLXNC1O60486 1568 aa18.2■□□□□ 0.5
MEST-206ENST00000416162 ZMYM3Q14202 1370 aa18.2■□□□□ 0.5
MEST-206ENST00000416162 INO80Q9ULG1 1556 aaPredicted RBP18.19■□□□□ 0.5
MEST-206ENST00000416162 PLEKHH2Q8IVE3 1493 aa18.19■□□□□ 0.5
MEST-206ENST00000416162 ATP7AQ04656 1500 aa18.18■□□□□ 0.5
MEST-206ENST00000416162 SYCP2Q9BX26 1530 aa18.18■□□□□ 0.5
MEST-206ENST00000416162 PKD2Q13563 968 aa18.17■□□□□ 0.5
MEST-206ENST00000416162 CEP170BQ9Y4F5 1589 aaPredicted RBP18.17■□□□□ 0.5
MEST-206ENST00000416162 ADGBQ8N7X0 1667 aa18.17■□□□□ 0.5
MEST-206ENST00000416162 SPAG9O60271 1321 aaKnown RBP18.16■□□□□ 0.5
MEST-206ENST00000416162 KIAA1107Q9UPP5 1409 aa18.16■□□□□ 0.5
MEST-206ENST00000416162 EHBP1L1Q8N3D4 1523 aa18.16■□□□□ 0.5
MEST-206ENST00000416162 TCOF1Q13428 1488 aaKnown RBP18.16■□□□□ 0.5
MEST-206ENST00000416162 MTUS2Q5JR59 1369 aa18.16■□□□□ 0.5
MEST-206ENST00000416162 RTN4Q9NQC3 1192 aaKnown RBP18.16■□□□□ 0.5
MEST-206ENST00000416162 GPATCH8Q9UKJ3 1502 aaKnown RBP18.15■□□□□ 0.5
MEST-206ENST00000416162 MIA2Q96PC5 1412 aa18.15■□□□□ 0.5
MEST-206ENST00000416162 KIF7Q2M1P5 1343 aa18.15■□□□□ 0.5
MEST-206ENST00000416162 A2MP01023 1474 aa18.14■□□□□ 0.49
MEST-206ENST00000416162 DHX29Q7Z478 1369 aaKnown RBP18.14■□□□□ 0.49
MEST-206ENST00000416162 BACH2Q9BYV9 841 aa18.13■□□□□ 0.49
MEST-206ENST00000416162 PPP6R1Q9UPN7 881 aa18.13■□□□□ 0.49
MEST-206ENST00000416162 RPRD2Q5VT52 1461 aaKnown RBP18.13■□□□□ 0.49
MEST-206ENST00000416162 NCKAP5LQ9HCH0 1330 aa18.12■□□□□ 0.49
MEST-206ENST00000416162 PDE4AP27815 886 aa18.12■□□□□ 0.49
MEST-206ENST00000416162 DDRGK1Q96HY6 314 aa18.12■□□□□ 0.49
MEST-206ENST00000416162 UBAP1LF5GYI3 381 aa18.11■□□□□ 0.49
MEST-206ENST00000416162 ZNF335Q9H4Z2 1342 aaPredicted RBP18.11■□□□□ 0.49
MEST-206ENST00000416162 GSE1Q14687 1217 aa18.1■□□□□ 0.49
MEST-206ENST00000416162 L3MBTL2Q969R5 705 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms