RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 PZPP20742 1482 aa20.71■□□□□ 0.91
HMGA1P1-201ENST00000415560 KIF3BO15066 747 aa20.71■□□□□ 0.91
HMGA1P1-201ENST00000415560 FRMPD1Q5SYB0 1578 aa20.69■□□□□ 0.9
HMGA1P1-201ENST00000415560 NEUROD1Q13562 356 aa20.69■□□□□ 0.9
HMGA1P1-201ENST00000415560 PKD2Q13563 968 aa20.69■□□□□ 0.9
HMGA1P1-201ENST00000415560 ABCA6Q8N139 1617 aa20.68■□□□□ 0.9
HMGA1P1-201ENST00000415560 SIN3AQ96ST3 1273 aa20.67■□□□□ 0.9
HMGA1P1-201ENST00000415560 FAM135AQ9P2D6 1515 aa20.67■□□□□ 0.9
HMGA1P1-201ENST00000415560 IQGAP3Q86VI3 1631 aa20.67■□□□□ 0.9
HMGA1P1-201ENST00000415560 DIP2CQ9Y2E4 1556 aa20.66■□□□□ 0.9
HMGA1P1-201ENST00000415560 DEPDC5O75140 1603 aa20.64■□□□□ 0.9
HMGA1P1-201ENST00000415560 ATP10AO60312 1499 aa20.64■□□□□ 0.89
HMGA1P1-201ENST00000415560 BCORL1Q5H9F3 1711 aa20.63■□□□□ 0.89
HMGA1P1-201ENST00000415560 ANKRD30BQ9BXX2 1392 aa20.62■□□□□ 0.89
HMGA1P1-201ENST00000415560 FOXD1Q16676 465 aa20.62■□□□□ 0.89
HMGA1P1-201ENST00000415560 YEATS2Q9ULM3 1422 aa20.61■□□□□ 0.89
HMGA1P1-201ENST00000415560 COL17A1Q9UMD9 1497 aaPredicted RBP20.61■□□□□ 0.89
HMGA1P1-201ENST00000415560 TONSLQ96HA7 1378 aa20.59■□□□□ 0.89
HMGA1P1-201ENST00000415560 GGT6Q6P531 493 aa20.59■□□□□ 0.89
HMGA1P1-201ENST00000415560 RNF17Q9BXT8 1623 aaKnown RBP20.59■□□□□ 0.89
HMGA1P1-201ENST00000415560 REREQ9P2R6 1566 aa20.58■□□□□ 0.88
HMGA1P1-201ENST00000415560 PRDM15P57071 1507 aaPredicted RBP20.58■□□□□ 0.88
HMGA1P1-201ENST00000415560 VWDEQ8N2E2 1590 aa20.55■□□□□ 0.88
HMGA1P1-201ENST00000415560 TET3O43151 1660 aa20.55■□□□□ 0.88
HMGA1P1-201ENST00000415560 PPP6R1Q9UPN7 881 aa20.53■□□□□ 0.88
HMGA1P1-201ENST00000415560 MROH1Q8NDA8 1641 aa20.53■□□□□ 0.88
HMGA1P1-201ENST00000415560 AGLP35573 1532 aa20.53■□□□□ 0.88
HMGA1P1-201ENST00000415560 ARHGEF40Q8TER5 1519 aa20.53■□□□□ 0.88
HMGA1P1-201ENST00000415560 WASHC2CQ9Y4E1 1318 aa20.53■□□□□ 0.88
HMGA1P1-201ENST00000415560 RPRD2Q5VT52 1461 aaKnown RBP20.51■□□□□ 0.87
HMGA1P1-201ENST00000415560 LMTK2Q8IWU2 1503 aa20.51■□□□□ 0.87
HMGA1P1-201ENST00000415560 E9PCH4 1651 aa20.48■□□□□ 0.87
HMGA1P1-201ENST00000415560 CEP152O94986 1710 aa20.48■□□□□ 0.87
HMGA1P1-201ENST00000415560 PPP1R15AO75807 674 aaPredicted RBP20.48■□□□□ 0.87
HMGA1P1-201ENST00000415560 ZC3H13Q5T200 1668 aaKnown RBP20.48■□□□□ 0.87
HMGA1P1-201ENST00000415560 CCDC144AA2RUR9 1427 aa20.47■□□□□ 0.87
HMGA1P1-201ENST00000415560 ARID4BQ4LE39 1312 aaPredicted RBP20.44■□□□□ 0.86
HMGA1P1-201ENST00000415560 EFCAB6Q5THR3 1501 aa20.43■□□□□ 0.86
HMGA1P1-201ENST00000415560 ESF1Q9H501 851 aaKnown RBP20.43■□□□□ 0.86
HMGA1P1-201ENST00000415560 SPHKAPQ2M3C7 1700 aa20.43■□□□□ 0.86
HMGA1P1-201ENST00000415560 ABCC3O15438 1527 aa20.43■□□□□ 0.86
HMGA1P1-201ENST00000415560 L3MBTL2Q969R5 705 aa20.42■□□□□ 0.86
HMGA1P1-201ENST00000415560 PTPRTO14522 1441 aa20.41■□□□□ 0.86
HMGA1P1-201ENST00000415560 CAMSAP1Q5T5Y3 1602 aa20.4■□□□□ 0.86
HMGA1P1-201ENST00000415560 PLA2R1Q13018 1463 aa20.39■□□□□ 0.85
HMGA1P1-201ENST00000415560 TRPM2O94759 1503 aa20.38■□□□□ 0.85
HMGA1P1-201ENST00000415560 ARHGAP31Q2M1Z3 1444 aa20.38■□□□□ 0.85
HMGA1P1-201ENST00000415560 MLECQ14165 292 aa20.38■□□□□ 0.85
HMGA1P1-201ENST00000415560 CFAP65Q6ZU64 1925 aaKnown RBP20.35■□□□□ 0.85
HMGA1P1-201ENST00000415560 NPATQ14207 1427 aa20.35■□□□□ 0.85
HMGA1P1-201ENST00000415560 CNTLNQ9NXG0 1405 aa20.34■□□□□ 0.85
HMGA1P1-201ENST00000415560 SIGLEC1Q9BZZ2 1709 aa20.33■□□□□ 0.85
HMGA1P1-201ENST00000415560 STAC3Q96MF2 364 aa20.32■□□□□ 0.84
HMGA1P1-201ENST00000415560 CLTCQ00610 1675 aaKnown RBP20.32■□□□□ 0.84
HMGA1P1-201ENST00000415560 KIF1BO60333 1816 aa20.32■□□□□ 0.84
HMGA1P1-201ENST00000415560 ZNF316A6NFI3 1004 aaPredicted RBP20.3■□□□□ 0.84
HMGA1P1-201ENST00000415560 RGL3Q3MIN7 710 aa20.3■□□□□ 0.84
HMGA1P1-201ENST00000415560 DCAF11Q8TEB1 546 aa20.3■□□□□ 0.84
HMGA1P1-201ENST00000415560 CLTCL1P53675 1640 aa20.29■□□□□ 0.84
HMGA1P1-201ENST00000415560 SLC52A1Q9NWF4 448 aa20.28■□□□□ 0.84
HMGA1P1-201ENST00000415560 NOS1P29475 1434 aa20.27■□□□□ 0.84
HMGA1P1-201ENST00000415560 NEURL4Q96JN8 1562 aa20.27■□□□□ 0.84
HMGA1P1-201ENST00000415560 KDM2AQ9Y2K7 1162 aa20.27■□□□□ 0.84
HMGA1P1-201ENST00000415560 PREX1Q8TCU6 1659 aa20.26■□□□□ 0.83
HMGA1P1-201ENST00000415560 ZMYM3Q14202 1370 aa20.24■□□□□ 0.83
HMGA1P1-201ENST00000415560 SPATA31E1Q6ZUB1 1445 aa20.24■□□□□ 0.83
HMGA1P1-201ENST00000415560 CHGAP10645 457 aaKnown RBP20.23■□□□□ 0.83
HMGA1P1-201ENST00000415560 UHRF1BP1Q6BDS2 1440 aa20.22■□□□□ 0.83
HMGA1P1-201ENST00000415560 ZNF326Q5BKZ1 582 aaKnown RBP20.22■□□□□ 0.83
HMGA1P1-201ENST00000415560 MROH2AA6NES4 1674 aa20.22■□□□□ 0.83
HMGA1P1-201ENST00000415560 NBPF8Q3BBV2 869 aa20.21■□□□□ 0.83
HMGA1P1-201ENST00000415560 RPGRIP1LQ68CZ1 1315 aa20.2■□□□□ 0.82
HMGA1P1-201ENST00000415560 ERVK-7P63135 1459 aa20.19■□□□□ 0.82
HMGA1P1-201ENST00000415560 FBXO31Q5XUX0 539 aaPredicted RBP20.19■□□□□ 0.82
HMGA1P1-201ENST00000415560 PIK3C2BO00750 1634 aa20.19■□□□□ 0.82
HMGA1P1-201ENST00000415560 SYNMO15061 1565 aa20.18■□□□□ 0.82
HMGA1P1-201ENST00000415560 UGGT1Q9NYU2 1555 aa20.18■□□□□ 0.82
HMGA1P1-201ENST00000415560 FER1L4A9Z1Z3 1794 aa20.17■□□□□ 0.82
HMGA1P1-201ENST00000415560 IDI1Q13907 227 aa20.17■□□□□ 0.82
HMGA1P1-201ENST00000415560 SPATA31D1Q6ZQQ2 1576 aa20.17■□□□□ 0.82
HMGA1P1-201ENST00000415560 STAG3Q9UJ98 1225 aa20.16■□□□□ 0.82
HMGA1P1-201ENST00000415560 EIF4G2P78344 907 aaKnown RBP eCLIP20.15■□□□□ 0.82
HMGA1P1-201ENST00000415560 ADGRB3O60242 1522 aa20.14■□□□□ 0.81
HMGA1P1-201ENST00000415560 PRAG1Q86YV5 1406 aa20.13■□□□□ 0.81
HMGA1P1-201ENST00000415560 RALGAPBQ86X10 1494 aa20.11■□□□□ 0.81
HMGA1P1-201ENST00000415560 TNRQ92752 1358 aa20.1■□□□□ 0.81
HMGA1P1-201ENST00000415560 VGFO15240 615 aaPredicted RBP20.1■□□□□ 0.81
HMGA1P1-201ENST00000415560 CARD11Q9BXL7 1154 aa20.09■□□□□ 0.81
HMGA1P1-201ENST00000415560 IFT172Q9UG01 1749 aa20.09■□□□□ 0.81
HMGA1P1-201ENST00000415560 MYOM2P54296 1465 aa20.09■□□□□ 0.81
HMGA1P1-201ENST00000415560 TRPM1Q7Z4N2 1603 aa20.08■□□□□ 0.8
HMGA1P1-201ENST00000415560 PPLO60437 1756 aa20.08■□□□□ 0.8
HMGA1P1-201ENST00000415560 ROCK2O75116 1388 aaKnown RBP20.08■□□□□ 0.8
HMGA1P1-201ENST00000415560 C3P01024 1663 aa20.07■□□□□ 0.8
HMGA1P1-201ENST00000415560 TMEM131LA2VDJ0 1609 aa20.07■□□□□ 0.8
HMGA1P1-201ENST00000415560 HDGFP51858 240 aaKnown RBP20.07■□□□□ 0.8
HMGA1P1-201ENST00000415560 HSPA5P11021 654 aaKnown RBP20.06■□□□□ 0.8
HMGA1P1-201ENST00000415560 CEBPAP49715 358 aaPredicted RBP20.05■□□□□ 0.8
HMGA1P1-201ENST00000415560 MADDQ8WXG6 1647 aa20.05■□□□□ 0.8
HMGA1P1-201ENST00000415560 MYO5BQ9ULV0 1848 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms