RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 PTPN23Q9H3S7 1636 aa9.75□□□□□ -0.85
HDAC8-211ENST00000415409 DHX57Q6P158 1386 aaKnown RBP9.75□□□□□ -0.85
HDAC8-211ENST00000415409 DCAF8Q5TAQ9 597 aa9.74□□□□□ -0.85
HDAC8-211ENST00000415409 SGIP1Q9BQI5 828 aa9.74□□□□□ -0.85
HDAC8-211ENST00000415409 CHIC2Q9UKJ5 165 aa9.74□□□□□ -0.85
HDAC8-211ENST00000415409 ZNF644Q9H582 1327 aaPredicted RBP9.74□□□□□ -0.85
HDAC8-211ENST00000415409 ACIN1Q9UKV3 1341 aaKnown RBP9.74□□□□□ -0.85
HDAC8-211ENST00000415409 HFM1A2PYH4 1435 aa9.73□□□□□ -0.85
HDAC8-211ENST00000415409 PTPRKQ15262 1439 aa9.73□□□□□ -0.85
HDAC8-211ENST00000415409 ABCC10Q5T3U5 1492 aa9.73□□□□□ -0.85
HDAC8-211ENST00000415409 KDM5BQ9UGL1 1544 aa9.73□□□□□ -0.85
HDAC8-211ENST00000415409 KLHL34Q8N239 644 aa9.73□□□□□ -0.85
HDAC8-211ENST00000415409 KCNH8Q96L42 1107 aa9.73□□□□□ -0.85
HDAC8-211ENST00000415409 KIF14Q15058 1648 aa9.73□□□□□ -0.85
HDAC8-211ENST00000415409 MAMSTRQ6ZN01 415 aa9.72□□□□□ -0.85
HDAC8-211ENST00000415409 ADCY10Q96PN6 1610 aa9.71□□□□□ -0.85
HDAC8-211ENST00000415409 TTLL13PA6NNM8 815 aa9.71□□□□□ -0.86
HDAC8-211ENST00000415409 SEC24BO95487 1268 aa9.71□□□□□ -0.86
HDAC8-211ENST00000415409 RRP7BPQ9NSQ0 103 aa9.71□□□□□ -0.86
HDAC8-211ENST00000415409 ROCK1Q13464 1354 aa9.71□□□□□ -0.86
HDAC8-211ENST00000415409 ABCC5O15440 1437 aa9.71□□□□□ -0.86
HDAC8-211ENST00000415409 DAPK1P53355 1430 aa9.71□□□□□ -0.86
HDAC8-211ENST00000415409 AKNAQ7Z591 1439 aa9.71□□□□□ -0.86
HDAC8-211ENST00000415409 RSPH4AQ5TD94 716 aa9.7□□□□□ -0.86
HDAC8-211ENST00000415409 NAIPQ13075 1403 aa9.7□□□□□ -0.86
HDAC8-211ENST00000415409 CAMSAP2Q08AD1 1489 aa9.7□□□□□ -0.86
HDAC8-211ENST00000415409 MAPKBP1O60336 1514 aa9.7□□□□□ -0.86
HDAC8-211ENST00000415409 TSPY4P0CV99 314 aa9.69□□□□□ -0.86
HDAC8-211ENST00000415409 TSPY10P0CW01 314 aa9.69□□□□□ -0.86
HDAC8-211ENST00000415409 IFNL1Q8IU54 200 aa9.69□□□□□ -0.86
HDAC8-211ENST00000415409 SCUBE2Q9NQ36 999 aa9.69□□□□□ -0.86
HDAC8-211ENST00000415409 VASPP50552 380 aaPredicted RBP9.68□□□□□ -0.86
HDAC8-211ENST00000415409 EFCAB2Q5VUJ9 269 aa9.68□□□□□ -0.86
HDAC8-211ENST00000415409 TRIM35Q9UPQ4 493 aa9.68□□□□□ -0.86
HDAC8-211ENST00000415409 PYGBP11216 843 aa9.67□□□□□ -0.86
HDAC8-211ENST00000415409 WDR7Q9Y4E6 1490 aa9.66□□□□□ -0.86
HDAC8-211ENST00000415409 PLCH2O75038 1416 aa9.66□□□□□ -0.86
HDAC8-211ENST00000415409 ANKRD30AQ9BXX3 1397 aa9.66□□□□□ -0.86
HDAC8-211ENST00000415409 HNRNPMP52272 730 aaKnown RBP eCLIP9.66□□□□□ -0.86
HDAC8-211ENST00000415409 TRIM52Q96A61 297 aa9.66□□□□□ -0.86
HDAC8-211ENST00000415409 ITSN2Q9NZM3 1697 aa9.66□□□□□ -0.86
HDAC8-211ENST00000415409 PLEKHH2Q8IVE3 1493 aa9.66□□□□□ -0.86
HDAC8-211ENST00000415409 ZCCHC11Q5TAX3 1644 aaKnown RBP9.65□□□□□ -0.86
HDAC8-211ENST00000415409 POTEJP0CG39 1038 aa9.65□□□□□ -0.86
HDAC8-211ENST00000415409 TMEM106CQ9BVX2 250 aa9.65□□□□□ -0.86
HDAC8-211ENST00000415409 DIP2BQ9P265 1576 aa9.65□□□□□ -0.86
HDAC8-211ENST00000415409 ASXL2Q76L83 1435 aa9.65□□□□□ -0.87
HDAC8-211ENST00000415409 DNMT1P26358 1616 aaKnown RBP9.64□□□□□ -0.87
HDAC8-211ENST00000415409 TSPOAP1O95153 1857 aa9.64□□□□□ -0.87
HDAC8-211ENST00000415409 ARHGAP5Q13017 1502 aa9.64□□□□□ -0.87
HDAC8-211ENST00000415409 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.64□□□□□ -0.87
HDAC8-211ENST00000415409 KIAA1107Q9UPP5 1409 aa9.64□□□□□ -0.87
HDAC8-211ENST00000415409 SHANK2Q9UPX8 1470 aa9.63□□□□□ -0.87
HDAC8-211ENST00000415409 NCOA1Q15788 1441 aa9.63□□□□□ -0.87
HDAC8-211ENST00000415409 C9orf84Q5VXU9 1444 aa9.63□□□□□ -0.87
HDAC8-211ENST00000415409 ADGRL2O95490 1459 aa9.62□□□□□ -0.87
HDAC8-211ENST00000415409 CCDC141Q6ZP82 1450 aa9.62□□□□□ -0.87
HDAC8-211ENST00000415409 POTEFA5A3E0 1075 aa9.62□□□□□ -0.87
HDAC8-211ENST00000415409 IER5LQ5T953 404 aa9.62□□□□□ -0.87
HDAC8-211ENST00000415409 TIMELESSQ9UNS1 1208 aa9.62□□□□□ -0.87
HDAC8-211ENST00000415409 MBD5Q9P267 1494 aa9.61□□□□□ -0.87
HDAC8-211ENST00000415409 COLQQ9Y215 455 aaPredicted RBP9.61□□□□□ -0.87
HDAC8-211ENST00000415409 ARHGEF5Q12774 1597 aa9.6□□□□□ -0.87
HDAC8-211ENST00000415409 TTC37Q6PGP7 1564 aa9.6□□□□□ -0.87
HDAC8-211ENST00000415409 SLC24A1O60721 1099 aa9.6□□□□□ -0.87
HDAC8-211ENST00000415409 GSE1Q14687 1217 aa9.6□□□□□ -0.87
HDAC8-211ENST00000415409 FAM69CQ0P6D2 419 aa9.59□□□□□ -0.87
HDAC8-211ENST00000415409 NEUROD1Q13562 356 aa9.59□□□□□ -0.87
HDAC8-211ENST00000415409 MPHOSPH9Q99550 1183 aa9.59□□□□□ -0.87
HDAC8-211ENST00000415409 ARAP3Q8WWN8 1544 aa9.59□□□□□ -0.87
HDAC8-211ENST00000415409 PREX2Q70Z35 1606 aa9.59□□□□□ -0.87
HDAC8-211ENST00000415409 ANKRD50Q9ULJ7 1429 aa9.58□□□□□ -0.88
HDAC8-211ENST00000415409 KDM6BO15054 1643 aa9.58□□□□□ -0.88
HDAC8-211ENST00000415409 POTEMA6NI47 508 aa9.58□□□□□ -0.88
HDAC8-211ENST00000415409 SIN3AQ96ST3 1273 aa9.58□□□□□ -0.88
HDAC8-211ENST00000415409 PCDHB8Q9UN66 801 aa9.58□□□□□ -0.88
HDAC8-211ENST00000415409 KIF15Q9NS87 1388 aa9.58□□□□□ -0.88
HDAC8-211ENST00000415409 GLI2P10070 1586 aa9.58□□□□□ -0.88
HDAC8-211ENST00000415409 SAMD9LQ8IVG5 1584 aa9.58□□□□□ -0.88
HDAC8-211ENST00000415409 CDC42BPAQ5VT25 1732 aa9.57□□□□□ -0.88
HDAC8-211ENST00000415409 PLCG2P16885 1265 aa9.57□□□□□ -0.88
HDAC8-211ENST00000415409 PLSCR2Q9NRY7 297 aa9.57□□□□□ -0.88
HDAC8-211ENST00000415409 SPAG9O60271 1321 aaKnown RBP9.56□□□□□ -0.88
HDAC8-211ENST00000415409 SYCP2Q9BX26 1530 aa9.56□□□□□ -0.88
HDAC8-211ENST00000415409 CD109Q6YHK3 1445 aa9.56□□□□□ -0.88
HDAC8-211ENST00000415409 GCC2Q8IWJ2 1684 aa9.55□□□□□ -0.88
HDAC8-211ENST00000415409 FANCAO15360 1455 aa9.55□□□□□ -0.88
HDAC8-211ENST00000415409 ZNF316A6NFI3 1004 aaPredicted RBP9.55□□□□□ -0.88
HDAC8-211ENST00000415409 POTEGQ6S5H5 508 aa9.55□□□□□ -0.88
HDAC8-211ENST00000415409 PPRC1Q5VV67 1664 aaKnown RBP9.55□□□□□ -0.88
HDAC8-211ENST00000415409 TONSLQ96HA7 1378 aa9.54□□□□□ -0.88
HDAC8-211ENST00000415409 FAM163AQ96GL9 167 aaPredicted RBP9.54□□□□□ -0.88
HDAC8-211ENST00000415409 ABCA9Q8IUA7 1624 aa9.53□□□□□ -0.88
HDAC8-211ENST00000415409 NUP155O75694 1391 aa9.53□□□□□ -0.88
HDAC8-211ENST00000415409 ARHGEF12Q9NZN5 1544 aa9.53□□□□□ -0.88
HDAC8-211ENST00000415409 ZNF467Q7Z7K2 595 aaPredicted RBP9.53□□□□□ -0.88
HDAC8-211ENST00000415409 AFAP1Q8N556 730 aa9.53□□□□□ -0.88
HDAC8-211ENST00000415409 RTEL1-TNFRSF6BF6WH68 1400 aa9.53□□□□□ -0.88
HDAC8-211ENST00000415409 SCAPERQ9BY12 1400 aa9.53□□□□□ -0.88
HDAC8-211ENST00000415409 TRAPPC8Q9Y2L5 1435 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms