RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 DEPDC5O75140 1603 aa22.11■■□□□ 1.13
RAPGEF1-204ENST00000414781 HNRNPMP52272 730 aaKnown RBP eCLIP22.11■■□□□ 1.13
RAPGEF1-204ENST00000414781 SENP3Q9H4L4 574 aaPredicted RBP22.11■■□□□ 1.13
RAPGEF1-204ENST00000414781 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.11■■□□□ 1.13
RAPGEF1-204ENST00000414781 SYNMO15061 1565 aa22.1■■□□□ 1.13
RAPGEF1-204ENST00000414781 UBTFP17480 764 aaKnown RBP22.1■■□□□ 1.13
RAPGEF1-204ENST00000414781 LRRC7Q96NW7 1537 aa22.1■■□□□ 1.13
RAPGEF1-204ENST00000414781 LRRIQ1Q96JM4 1722 aa22.09■■□□□ 1.13
RAPGEF1-204ENST00000414781 FAM135AQ9P2D6 1515 aa22.09■■□□□ 1.13
RAPGEF1-204ENST00000414781 PZPP20742 1482 aa22.09■■□□□ 1.13
RAPGEF1-204ENST00000414781 NLRP1Q9C000 1473 aa22.09■■□□□ 1.13
RAPGEF1-204ENST00000414781 CASKIN1Q8WXD9 1431 aa22.06■■□□□ 1.12
RAPGEF1-204ENST00000414781 GPATCH8Q9UKJ3 1502 aaKnown RBP22.06■■□□□ 1.12
RAPGEF1-204ENST00000414781 ADGBQ8N7X0 1667 aa22.06■■□□□ 1.12
RAPGEF1-204ENST00000414781 FBXO31Q5XUX0 539 aaPredicted RBP22.04■■□□□ 1.12
RAPGEF1-204ENST00000414781 POTEAQ6S8J7 498 aa22.04■■□□□ 1.12
RAPGEF1-204ENST00000414781 UGGT1Q9NYU2 1555 aa22.04■■□□□ 1.12
RAPGEF1-204ENST00000414781 IQGAP1P46940 1657 aa22.03■■□□□ 1.12
RAPGEF1-204ENST00000414781 MIA2Q96PC5 1412 aa22.03■■□□□ 1.12
RAPGEF1-204ENST00000414781 CFDP1Q9UEE9 299 aaPredicted RBP22.02■■□□□ 1.12
RAPGEF1-204ENST00000414781 KDM5DQ9BY66 1539 aa22.01■■□□□ 1.11
RAPGEF1-204ENST00000414781 DHX29Q7Z478 1369 aaKnown RBP21.99■■□□□ 1.11
RAPGEF1-204ENST00000414781 RTEL1-TNFRSF6BF6WH68 1400 aa21.97■■□□□ 1.11
RAPGEF1-204ENST00000414781 FAM135BQ49AJ0 1406 aa21.97■■□□□ 1.11
RAPGEF1-204ENST00000414781 WASHC2CQ9Y4E1 1318 aa21.95■■□□□ 1.1
RAPGEF1-204ENST00000414781 CCNB3Q8WWL7 1395 aa21.95■■□□□ 1.1
RAPGEF1-204ENST00000414781 STRCP1A6NGW2 1772 aa21.94■■□□□ 1.1
RAPGEF1-204ENST00000414781 KIF3BO15066 747 aa21.93■■□□□ 1.1
RAPGEF1-204ENST00000414781 FYCO1Q9BQS8 1478 aa21.93■■□□□ 1.1
RAPGEF1-204ENST00000414781 EHMT2Q96KQ7 1210 aa21.89■■□□□ 1.09
RAPGEF1-204ENST00000414781 MBD5Q9P267 1494 aa21.88■■□□□ 1.09
RAPGEF1-204ENST00000414781 ZC3H13Q5T200 1668 aaKnown RBP21.85■■□□□ 1.09
RAPGEF1-204ENST00000414781 SCAF11Q99590 1463 aaKnown RBP21.84■■□□□ 1.09
RAPGEF1-204ENST00000414781 SETD1AO15047 1707 aaKnown RBP21.84■■□□□ 1.09
RAPGEF1-204ENST00000414781 UPF1Q92900 1129 aaKnown RBP eCLIP21.82■■□□□ 1.08
RAPGEF1-204ENST00000414781 LRRC9Q6ZRR7 1453 aa21.8■■□□□ 1.08
RAPGEF1-204ENST00000414781 ZNF644Q9H582 1327 aaPredicted RBP21.8■■□□□ 1.08
RAPGEF1-204ENST00000414781 MTUS2Q5JR59 1369 aa21.78■■□□□ 1.08
RAPGEF1-204ENST00000414781 CCDC141Q6ZP82 1450 aa21.77■■□□□ 1.08
RAPGEF1-204ENST00000414781 ERVK-7P63135 1459 aa21.77■■□□□ 1.07
RAPGEF1-204ENST00000414781 JCADQ9P266 1359 aa21.76■■□□□ 1.07
RAPGEF1-204ENST00000414781 RSPH4AQ5TD94 716 aa21.76■■□□□ 1.07
RAPGEF1-204ENST00000414781 ARHGAP23Q9P227 1491 aa21.76■■□□□ 1.07
RAPGEF1-204ENST00000414781 XIRP1Q702N8 1843 aaKnown RBP21.75■■□□□ 1.07
RAPGEF1-204ENST00000414781 ROBO1Q9Y6N7 1651 aa21.75■■□□□ 1.07
RAPGEF1-204ENST00000414781 SLIT1O75093 1534 aa21.75■■□□□ 1.07
RAPGEF1-204ENST00000414781 TMEM94Q12767 1356 aa21.74■■□□□ 1.07
RAPGEF1-204ENST00000414781 TXNDC2Q86VQ3 553 aa21.74■■□□□ 1.07
RAPGEF1-204ENST00000414781 TIAM1Q13009 1591 aa21.74■■□□□ 1.07
RAPGEF1-204ENST00000414781 EID1Q9Y6B2 187 aa21.73■■□□□ 1.07
RAPGEF1-204ENST00000414781 ABCC3O15438 1527 aa21.73■■□□□ 1.07
RAPGEF1-204ENST00000414781 LTKP29376 864 aa21.72■■□□□ 1.07
RAPGEF1-204ENST00000414781 ZNF772Q68DY9 489 aaPredicted RBP21.72■■□□□ 1.07
RAPGEF1-204ENST00000414781 NCOA2Q15596 1464 aa21.71■■□□□ 1.07
RAPGEF1-204ENST00000414781 UBR1Q8IWV7 1749 aa21.71■■□□□ 1.07
RAPGEF1-204ENST00000414781 MAP3K1Q13233 1512 aa21.67■■□□□ 1.06
RAPGEF1-204ENST00000414781 KCNA6P17658 529 aa21.67■■□□□ 1.06
RAPGEF1-204ENST00000414781 SPATA31A6Q5VVP1 1343 aa21.66■■□□□ 1.06
RAPGEF1-204ENST00000414781 CEP162Q5TB80 1403 aa21.65■■□□□ 1.06
RAPGEF1-204ENST00000414781 TRIM52Q96A61 297 aa21.65■■□□□ 1.06
RAPGEF1-204ENST00000414781 EHBP1L1Q8N3D4 1523 aa21.65■■□□□ 1.06
RAPGEF1-204ENST00000414781 PROSER2Q86WR7 435 aaPredicted RBP21.64■■□□□ 1.05
RAPGEF1-204ENST00000414781 MSH6P52701 1360 aa21.63■■□□□ 1.05
RAPGEF1-204ENST00000414781 TSPY4P0CV99 314 aa21.63■■□□□ 1.05
RAPGEF1-204ENST00000414781 TSPY10P0CW01 314 aa21.63■■□□□ 1.05
RAPGEF1-204ENST00000414781 MEX3CQ5U5Q3 659 aaKnown RBP21.63■■□□□ 1.05
RAPGEF1-204ENST00000414781 PRDM15P57071 1507 aaPredicted RBP21.63■■□□□ 1.05
RAPGEF1-204ENST00000414781 NKTRP30414 1462 aaKnown RBP21.63■■□□□ 1.05
RAPGEF1-204ENST00000414781 CAMSAP2Q08AD1 1489 aa21.63■■□□□ 1.05
RAPGEF1-204ENST00000414781 CDK12Q9NYV4 1490 aaPredicted RBP21.63■■□□□ 1.05
RAPGEF1-204ENST00000414781 FGD6Q6ZV73 1430 aa21.63■■□□□ 1.05
RAPGEF1-204ENST00000414781 PHLPP1O60346 1717 aa21.62■■□□□ 1.05
RAPGEF1-204ENST00000414781 TMEM2Q9UHN6 1383 aa21.61■■□□□ 1.05
RAPGEF1-204ENST00000414781 SLAIN2Q9P270 581 aa21.61■■□□□ 1.05
RAPGEF1-204ENST00000414781 RXRBP28702 533 aa21.6■■□□□ 1.05
RAPGEF1-204ENST00000414781 ARHGEF5Q12774 1597 aa21.59■■□□□ 1.05
RAPGEF1-204ENST00000414781 LRP6O75581 1613 aa21.58■■□□□ 1.05
RAPGEF1-204ENST00000414781 EIF2AK4Q9P2K8 1649 aaKnown RBP21.58■■□□□ 1.05
RAPGEF1-204ENST00000414781 ARHGAP31Q2M1Z3 1444 aa21.57■■□□□ 1.04
RAPGEF1-204ENST00000414781 SRCAPQ6ZRS2 3230 aa21.57■■□□□ 1.04
RAPGEF1-204ENST00000414781 COL16A1Q07092 1604 aaPredicted RBP21.56■■□□□ 1.04
RAPGEF1-204ENST00000414781 NWD1Q149M9 1564 aa21.55■■□□□ 1.04
RAPGEF1-204ENST00000414781 STAG3Q9UJ98 1225 aa21.54■■□□□ 1.04
RAPGEF1-204ENST00000414781 MROH1Q8NDA8 1641 aa21.54■■□□□ 1.04
RAPGEF1-204ENST00000414781 RBM33Q96EV2 1170 aaKnown RBP21.52■■□□□ 1.04
RAPGEF1-204ENST00000414781 SLC26A8Q96RN1 970 aa21.51■■□□□ 1.03
RAPGEF1-204ENST00000414781 TET3O43151 1660 aa21.5■■□□□ 1.03
RAPGEF1-204ENST00000414781 EFCAB6Q5THR3 1501 aa21.5■■□□□ 1.03
RAPGEF1-204ENST00000414781 MAST1Q9Y2H9 1570 aa21.5■■□□□ 1.03
RAPGEF1-204ENST00000414781 FOXD1Q16676 465 aa21.5■■□□□ 1.03
RAPGEF1-204ENST00000414781 KDM5AP29375 1690 aaKnown RBP21.49■■□□□ 1.03
RAPGEF1-204ENST00000414781 PIK3C2BO00750 1634 aa21.48■■□□□ 1.03
RAPGEF1-204ENST00000414781 CEP152O94986 1710 aa21.48■■□□□ 1.03
RAPGEF1-204ENST00000414781 NCOA3Q9Y6Q9 1424 aa21.46■■□□□ 1.03
RAPGEF1-204ENST00000414781 SHPRHQ149N8 1683 aa21.46■■□□□ 1.03
RAPGEF1-204ENST00000414781 AHDC1Q5TGY3 1603 aaPredicted RBP21.45■■□□□ 1.02
RAPGEF1-204ENST00000414781 DUOX2Q9NRD8 1548 aa21.43■■□□□ 1.02
RAPGEF1-204ENST00000414781 CFAP65Q6ZU64 1925 aaKnown RBP21.41■■□□□ 1.02
RAPGEF1-204ENST00000414781 AFF2P51816 1311 aa21.4■■□□□ 1.02
RAPGEF1-204ENST00000414781 CADPS2Q86UW7 1296 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms