RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 KIAA0586Q9BVV6 1533 aa19.36■□□□□ 0.69
SEMA3F-202ENST00000413852 RALBP1Q15311 655 aa19.36■□□□□ 0.69
SEMA3F-202ENST00000413852 TROQ12816 1431 aaPredicted RBP19.35■□□□□ 0.69
SEMA3F-202ENST00000413852 NLRP13Q86W25 1043 aa19.34■□□□□ 0.69
SEMA3F-202ENST00000413852 KIAA0556O60303 1618 aa19.34■□□□□ 0.69
SEMA3F-202ENST00000413852 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.34■□□□□ 0.69
SEMA3F-202ENST00000413852 RALGAPBQ86X10 1494 aa19.33■□□□□ 0.68
SEMA3F-202ENST00000413852 PANK3Q9H999 370 aa19.33■□□□□ 0.68
SEMA3F-202ENST00000413852 RAPGEF6Q8TEU7 1601 aa19.33■□□□□ 0.68
SEMA3F-202ENST00000413852 PER1O15534 1290 aaPredicted RBP19.31■□□□□ 0.68
SEMA3F-202ENST00000413852 KTN1Q86UP2 1357 aaKnown RBP19.31■□□□□ 0.68
SEMA3F-202ENST00000413852 TSPY4P0CV99 314 aa19.3■□□□□ 0.68
SEMA3F-202ENST00000413852 TSPY10P0CW01 314 aa19.3■□□□□ 0.68
SEMA3F-202ENST00000413852 ARID4BQ4LE39 1312 aaPredicted RBP19.3■□□□□ 0.68
SEMA3F-202ENST00000413852 CHMP7Q8WUX9 453 aaPredicted RBP19.3■□□□□ 0.68
SEMA3F-202ENST00000413852 DISP3Q9P2K9 1392 aa19.29■□□□□ 0.68
SEMA3F-202ENST00000413852 BRPF3Q9ULD4 1205 aa19.28■□□□□ 0.68
SEMA3F-202ENST00000413852 ADAMTS8Q9UP79 889 aa19.28■□□□□ 0.68
SEMA3F-202ENST00000413852 C9orf84Q5VXU9 1444 aa19.27■□□□□ 0.68
SEMA3F-202ENST00000413852 UHRF1BP1Q6BDS2 1440 aa19.27■□□□□ 0.68
SEMA3F-202ENST00000413852 PLEKHD1A6NEE1 506 aa19.27■□□□□ 0.67
SEMA3F-202ENST00000413852 PARD3Q8TEW0 1356 aa19.25■□□□□ 0.67
SEMA3F-202ENST00000413852 RGS3P49796 1198 aa19.25■□□□□ 0.67
SEMA3F-202ENST00000413852 JPH4Q96JJ6 628 aa19.23■□□□□ 0.67
SEMA3F-202ENST00000413852 CCDC146Q8IYE0 955 aa19.22■□□□□ 0.67
SEMA3F-202ENST00000413852 ADGRL2O95490 1459 aa19.22■□□□□ 0.67
SEMA3F-202ENST00000413852 TESK2Q96S53 571 aa19.21■□□□□ 0.67
SEMA3F-202ENST00000413852 ADGBQ8N7X0 1667 aa19.21■□□□□ 0.67
SEMA3F-202ENST00000413852 GRIN2AQ12879 1464 aa19.2■□□□□ 0.66
SEMA3F-202ENST00000413852 MS4A1P11836 297 aa19.19■□□□□ 0.66
SEMA3F-202ENST00000413852 PRKCSHP14314 528 aaPredicted RBP19.19■□□□□ 0.66
SEMA3F-202ENST00000413852 PDE3BQ13370 1112 aa19.19■□□□□ 0.66
SEMA3F-202ENST00000413852 NFKBIBQ15653 356 aa19.19■□□□□ 0.66
SEMA3F-202ENST00000413852 PLEKHH1Q9ULM0 1364 aa19.17■□□□□ 0.66
SEMA3F-202ENST00000413852 PRAG1Q86YV5 1406 aa19.16■□□□□ 0.66
SEMA3F-202ENST00000413852 MRC2Q9UBG0 1479 aa19.16■□□□□ 0.66
SEMA3F-202ENST00000413852 SPINK5Q9NQ38 1064 aaPredicted RBP19.15■□□□□ 0.66
SEMA3F-202ENST00000413852 FRAT1Q92837 279 aaPredicted RBP19.15■□□□□ 0.66
SEMA3F-202ENST00000413852 CROCC2H7BZ55 1655 aa19.15■□□□□ 0.66
SEMA3F-202ENST00000413852 CCDC144AA2RUR9 1427 aa19.14■□□□□ 0.66
SEMA3F-202ENST00000413852 E9PCH4 1651 aa19.13■□□□□ 0.65
SEMA3F-202ENST00000413852 PPM1GO15355 546 aaPredicted RBP19.13■□□□□ 0.65
SEMA3F-202ENST00000413852 CDC42BPAQ5VT25 1732 aa19.13■□□□□ 0.65
SEMA3F-202ENST00000413852 ITSN2Q9NZM3 1697 aa19.12■□□□□ 0.65
SEMA3F-202ENST00000413852 DUSP27Q5VZP5 1158 aa19.12■□□□□ 0.65
SEMA3F-202ENST00000413852 CEP170Q5SW79 1584 aa19.12■□□□□ 0.65
SEMA3F-202ENST00000413852 FRAT2O75474 233 aaPredicted RBP19.12■□□□□ 0.65
SEMA3F-202ENST00000413852 BCAR3O75815 825 aa19.12■□□□□ 0.65
SEMA3F-202ENST00000413852 KDM5DQ9BY66 1539 aa19.12■□□□□ 0.65
SEMA3F-202ENST00000413852 ARHGEF12Q9NZN5 1544 aa19.12■□□□□ 0.65
SEMA3F-202ENST00000413852 ATP10BO94823 1461 aa19.11■□□□□ 0.65
SEMA3F-202ENST00000413852 C8orf34Q49A92 452 aa19.11■□□□□ 0.65
SEMA3F-202ENST00000413852 KDM2BQ8NHM5 1336 aa19.11■□□□□ 0.65
SEMA3F-202ENST00000413852 DAXXQ9UER7 740 aaPredicted RBP19.11■□□□□ 0.65
SEMA3F-202ENST00000413852 PLA2R1Q13018 1463 aa19.1■□□□□ 0.65
SEMA3F-202ENST00000413852 WDR43Q15061 677 aaKnown RBP eCLIP19.1■□□□□ 0.65
SEMA3F-202ENST00000413852 A2MP01023 1474 aa19.1■□□□□ 0.65
SEMA3F-202ENST00000413852 PPP2R1AP30153 589 aa19.1■□□□□ 0.65
SEMA3F-202ENST00000413852 DMRT2Q9Y5R5 561 aa19.1■□□□□ 0.65
SEMA3F-202ENST00000413852 GSE1Q14687 1217 aa19.09■□□□□ 0.65
SEMA3F-202ENST00000413852 ERBINQ96RT1 1412 aa19.09■□□□□ 0.65
SEMA3F-202ENST00000413852 FAM135AQ9P2D6 1515 aa19.09■□□□□ 0.65
SEMA3F-202ENST00000413852 TMF1P82094 1093 aa19.09■□□□□ 0.65
SEMA3F-202ENST00000413852 MAGI1Q96QZ7 1491 aaPredicted RBP19.09■□□□□ 0.65
SEMA3F-202ENST00000413852 WASHC2CQ9Y4E1 1318 aa19.08■□□□□ 0.64
SEMA3F-202ENST00000413852 ABCC10Q5T3U5 1492 aa19.08■□□□□ 0.64
SEMA3F-202ENST00000413852 BLMP54132 1417 aaPredicted RBP19.07■□□□□ 0.64
SEMA3F-202ENST00000413852 IFT140Q96RY7 1462 aa19.07■□□□□ 0.64
SEMA3F-202ENST00000413852 USP35Q9P2H5 1018 aa19.07■□□□□ 0.64
SEMA3F-202ENST00000413852 DDRGK1Q96HY6 314 aa19.06■□□□□ 0.64
SEMA3F-202ENST00000413852 KNSTRNQ9Y448 316 aa19.06■□□□□ 0.64
SEMA3F-202ENST00000413852 COL17A1Q9UMD9 1497 aaPredicted RBP19.06■□□□□ 0.64
SEMA3F-202ENST00000413852 EIF4G3O43432 1585 aaKnown RBP19.05■□□□□ 0.64
SEMA3F-202ENST00000413852 APAF1O14727 1248 aa19.05■□□□□ 0.64
SEMA3F-202ENST00000413852 TRPM1Q7Z4N2 1603 aa19.05■□□□□ 0.64
SEMA3F-202ENST00000413852 MAGI2Q86UL8 1455 aa19.04■□□□□ 0.64
SEMA3F-202ENST00000413852 PTPRGP23470 1445 aa19.04■□□□□ 0.64
SEMA3F-202ENST00000413852 SEC24BO95487 1268 aa19.04■□□□□ 0.64
SEMA3F-202ENST00000413852 IGHDP01880 384 aa19.04■□□□□ 0.64
SEMA3F-202ENST00000413852 FAM161AQ3B820 660 aa19.04■□□□□ 0.64
SEMA3F-202ENST00000413852 GOLGA2Q08379 1002 aa19.03■□□□□ 0.64
SEMA3F-202ENST00000413852 CENPQQ7L2Z9 268 aaPredicted RBP19.03■□□□□ 0.64
SEMA3F-202ENST00000413852 CARMIL2Q6F5E8 1435 aa19.02■□□□□ 0.64
SEMA3F-202ENST00000413852 ARXQ96QS3 562 aa19.02■□□□□ 0.64
SEMA3F-202ENST00000413852 NEUROD2Q15784 382 aa19.01■□□□□ 0.63
SEMA3F-202ENST00000413852 PLEKHH2Q8IVE3 1493 aa19.01■□□□□ 0.63
SEMA3F-202ENST00000413852 ZMYM4Q5VZL5 1548 aa19.01■□□□□ 0.63
SEMA3F-202ENST00000413852 AMER1Q5JTC6 1135 aaPredicted RBP19■□□□□ 0.63
SEMA3F-202ENST00000413852 ADCY10Q96PN6 1610 aa19■□□□□ 0.63
SEMA3F-202ENST00000413852 TNNT2P45379 298 aaPredicted RBP18.99■□□□□ 0.63
SEMA3F-202ENST00000413852 PANK1Q8TE04 598 aa18.98■□□□□ 0.63
SEMA3F-202ENST00000413852 SLFN5Q08AF3 891 aa18.98■□□□□ 0.63
SEMA3F-202ENST00000413852 TNNQ9UQP3 1299 aa18.98■□□□□ 0.63
SEMA3F-202ENST00000413852 SHANK2Q9UPX8 1470 aa18.97■□□□□ 0.63
SEMA3F-202ENST00000413852 SLKQ9H2G2 1235 aaPredicted RBP18.97■□□□□ 0.63
SEMA3F-202ENST00000413852 RRP7AQ9Y3A4 280 aaKnown RBP18.97■□□□□ 0.63
SEMA3F-202ENST00000413852 EIF5BO60841 1220 aaKnown RBP18.96■□□□□ 0.63
SEMA3F-202ENST00000413852 COG6Q9Y2V7 657 aa18.96■□□□□ 0.63
SEMA3F-202ENST00000413852 GPRASP1Q5JY77 1395 aa18.96■□□□□ 0.63
SEMA3F-202ENST00000413852 ZNF521Q96K83 1311 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms