RNA–Protein interactions for RNA: ENST00000413164.6

SLC13A3-204, Transcript of solute carrier family 13 member 3, humanhuman

TSL 2 BASIC

Gene SLC13A3, Length 2,008 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-204ENST00000413164 MAGI2Q86UL8 1455 aa29.22■■■□□ 2.27
SLC13A3-204ENST00000413164 ERBINQ96RT1 1412 aa29.22■■■□□ 2.27
SLC13A3-204ENST00000413164 CNTLNQ9NXG0 1405 aa29.21■■■□□ 2.27
SLC13A3-204ENST00000413164 TRAPPC8Q9Y2L5 1435 aa29.2■■■□□ 2.27
SLC13A3-204ENST00000413164 KIF13AQ9H1H9 1805 aa29.19■■■□□ 2.26
SLC13A3-204ENST00000413164 RALGAPBQ86X10 1494 aa29.18■■■□□ 2.26
SLC13A3-204ENST00000413164 TSPOAP1O95153 1857 aa29.17■■■□□ 2.26
SLC13A3-204ENST00000413164 CFAP74Q9C0B2 1584 aa29.15■■■□□ 2.26
SLC13A3-204ENST00000413164 ADGRL1O94910 1474 aa29.15■■■□□ 2.26
SLC13A3-204ENST00000413164 KDM5CP41229 1560 aa29.15■■■□□ 2.26
SLC13A3-204ENST00000413164 PLA2R1Q13018 1463 aa29.14■■■□□ 2.26
SLC13A3-204ENST00000413164 RTEL1-TNFRSF6BF6WH68 1400 aa29.14■■■□□ 2.25
SLC13A3-204ENST00000413164 KIF7Q2M1P5 1343 aa29.12■■■□□ 2.25
SLC13A3-204ENST00000413164 USP47Q96K76 1375 aa29.12■■■□□ 2.25
SLC13A3-204ENST00000413164 SCAPERQ9BY12 1400 aa29.12■■■□□ 2.25
SLC13A3-204ENST00000413164 TRHP20396 242 aaPredicted RBP29.11■■■□□ 2.25
SLC13A3-204ENST00000413164 ZFYVE16Q7Z3T8 1539 aa29.11■■■□□ 2.25
SLC13A3-204ENST00000413164 CCDC144AA2RUR9 1427 aa29.1■■■□□ 2.25
SLC13A3-204ENST00000413164 NEO1Q92859 1461 aa29.1■■■□□ 2.25
SLC13A3-204ENST00000413164 ATP10AO60312 1499 aa29.09■■■□□ 2.25
SLC13A3-204ENST00000413164 ZNF326Q5BKZ1 582 aaKnown RBP29.08■■■□□ 2.25
SLC13A3-204ENST00000413164 AFAP1Q8N556 730 aa29.08■■■□□ 2.25
SLC13A3-204ENST00000413164 BCORL1Q5H9F3 1711 aa29.07■■■□□ 2.24
SLC13A3-204ENST00000413164 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.06■■■□□ 2.242e-8■■■□□ 18.6
SLC13A3-204ENST00000413164 SPAG9O60271 1321 aaKnown RBP29.05■■■□□ 2.24
SLC13A3-204ENST00000413164 PPRC1Q5VV67 1664 aaKnown RBP29.04■■■□□ 2.24
SLC13A3-204ENST00000413164 DCAF11Q8TEB1 546 aa29.03■■■□□ 2.24
SLC13A3-204ENST00000413164 INO80Q9ULG1 1556 aaPredicted RBP29.02■■■□□ 2.24
SLC13A3-204ENST00000413164 ARID4BQ4LE39 1312 aaPredicted RBP29■■■□□ 2.23
SLC13A3-204ENST00000413164 MYT1LQ9UL68 1186 aa29■■■□□ 2.23
SLC13A3-204ENST00000413164 DEPDC5O75140 1603 aa28.98■■■□□ 2.23
SLC13A3-204ENST00000413164 ATP7AQ04656 1500 aa28.98■■■□□ 2.23
SLC13A3-204ENST00000413164 PRAG1Q86YV5 1406 aa28.98■■■□□ 2.23
SLC13A3-204ENST00000413164 KDM2AQ9Y2K7 1162 aa28.98■■■□□ 2.23
SLC13A3-204ENST00000413164 CARD11Q9BXL7 1154 aa28.97■■■□□ 2.23
SLC13A3-204ENST00000413164 PRKRIP1Q9H875 184 aaPredicted RBP28.97■■■□□ 2.23
SLC13A3-204ENST00000413164 ZNF518AQ6AHZ1 1483 aa28.97■■■□□ 2.23
SLC13A3-204ENST00000413164 TRPM1Q7Z4N2 1603 aa28.96■■■□□ 2.23
SLC13A3-204ENST00000413164 A2MP01023 1474 aa28.95■■■□□ 2.23
SLC13A3-204ENST00000413164 RAPGEF3O95398 923 aa28.95■■■□□ 2.23
SLC13A3-204ENST00000413164 POGZQ7Z3K3 1410 aa28.95■■■□□ 2.22
SLC13A3-204ENST00000413164 E9PCH4 1651 aa28.92■■■□□ 2.22
SLC13A3-204ENST00000413164 ROCK2O75116 1388 aaKnown RBP28.89■■■□□ 2.22
SLC13A3-204ENST00000413164 DHX29Q7Z478 1369 aaKnown RBP28.89■■■□□ 2.22
SLC13A3-204ENST00000413164 SUPT16HQ9Y5B9 1047 aaKnown RBP28.89■■■□□ 2.21
SLC13A3-204ENST00000413164 VWDEQ8N2E2 1590 aa28.88■■■□□ 2.21
SLC13A3-204ENST00000413164 GPRASP1Q5JY77 1395 aa28.88■■■□□ 2.21
SLC13A3-204ENST00000413164 EIF2AK4Q9P2K8 1649 aaKnown RBP28.87■■■□□ 2.21
SLC13A3-204ENST00000413164 LAMC1P11047 1609 aa28.86■■■□□ 2.21
SLC13A3-204ENST00000413164 RGL3Q3MIN7 710 aa28.86■■■□□ 2.21
SLC13A3-204ENST00000413164 RICTORQ6R327 1708 aa28.85■■■□□ 2.21
SLC13A3-204ENST00000413164 TET3O43151 1660 aa28.84■■■□□ 2.21
SLC13A3-204ENST00000413164 TRPM2O94759 1503 aa28.84■■■□□ 2.21
SLC13A3-204ENST00000413164 ST20-MTHFSA0A0A6YYL1 179 aa28.84■■■□□ 2.21
SLC13A3-204ENST00000413164 PTPRTO14522 1441 aa28.83■■■□□ 2.21
SLC13A3-204ENST00000413164 CCDC184Q52MB2 194 aa28.83■■■□□ 2.21
SLC13A3-204ENST00000413164 PRDM15P57071 1507 aaPredicted RBP28.81■■■□□ 2.2
SLC13A3-204ENST00000413164 KIDINS220Q9ULH0 1771 aa28.81■■■□□ 2.2
SLC13A3-204ENST00000413164 SPHKAPQ2M3C7 1700 aa28.81■■■□□ 2.2
SLC13A3-204ENST00000413164 HECW2Q9P2P5 1572 aa28.8■■■□□ 2.2
SLC13A3-204ENST00000413164 MROH1Q8NDA8 1641 aa28.8■■■□□ 2.2
SLC13A3-204ENST00000413164 MLH3Q9UHC1 1453 aa28.8■■■□□ 2.2
SLC13A3-204ENST00000413164 FRMPD1Q5SYB0 1578 aa28.78■■■□□ 2.2
SLC13A3-204ENST00000413164 CEP152O94986 1710 aa28.77■■■□□ 2.2
SLC13A3-204ENST00000413164 NBPF1Q3BBV0 1214 aa28.76■■■□□ 2.19
SLC13A3-204ENST00000413164 COL17A1Q9UMD9 1497 aaPredicted RBP28.76■■■□□ 2.19
SLC13A3-204ENST00000413164 KANK1Q14678 1352 aa28.75■■■□□ 2.19
SLC13A3-204ENST00000413164 HNRNPUQ00839 825 aaKnown RBP eCLIP28.74■■■□□ 2.192e-6■■■□□ 16.8
SLC13A3-204ENST00000413164 RNF17Q9BXT8 1623 aaKnown RBP28.73■■■□□ 2.19
SLC13A3-204ENST00000413164 CLTCL1P53675 1640 aa28.73■■■□□ 2.19
SLC13A3-204ENST00000413164 KIF3BO15066 747 aa28.72■■■□□ 2.19
SLC13A3-204ENST00000413164 MRS2Q9HD23 443 aa28.72■■■□□ 2.19
SLC13A3-204ENST00000413164 POLR3GLQ9BT43 218 aa28.71■■■□□ 2.19
SLC13A3-204ENST00000413164 ZMYM4Q5VZL5 1548 aa28.69■■■□□ 2.18
SLC13A3-204ENST00000413164 MADDQ8WXG6 1647 aa28.69■■■□□ 2.18
SLC13A3-204ENST00000413164 NEURL4Q96JN8 1562 aa28.69■■■□□ 2.18
SLC13A3-204ENST00000413164 PELP1Q8IZL8 1130 aaKnown RBP28.68■■■□□ 2.18
SLC13A3-204ENST00000413164 ABCA6Q8N139 1617 aa28.68■■■□□ 2.18
SLC13A3-204ENST00000413164 YEATS2Q9ULM3 1422 aa28.67■■■□□ 2.18
SLC13A3-204ENST00000413164 STAC3Q96MF2 364 aa28.65■■■□□ 2.18
SLC13A3-204ENST00000413164 EFCAB6Q5THR3 1501 aa28.65■■■□□ 2.18
SLC13A3-204ENST00000413164 LMTK2Q8IWU2 1503 aa28.64■■■□□ 2.18
SLC13A3-204ENST00000413164 DIP2CQ9Y2E4 1556 aa28.64■■■□□ 2.17
SLC13A3-204ENST00000413164 TESK2Q96S53 571 aa28.63■■■□□ 2.17
SLC13A3-204ENST00000413164 FAM9BQ8IZU0 186 aa28.6■■■□□ 2.17
SLC13A3-204ENST00000413164 KTN1Q86UP2 1357 aaKnown RBP28.58■■■□□ 2.17
SLC13A3-204ENST00000413164 IQGAP1P46940 1657 aa28.57■■■□□ 2.16
SLC13A3-204ENST00000413164 FKBP8Q14318 412 aa28.56■■■□□ 2.16
SLC13A3-204ENST00000413164 DISP3Q9P2K9 1392 aa28.55■■■□□ 2.16
SLC13A3-204ENST00000413164 ZBED9Q6R2W3 1325 aa28.54■■■□□ 2.16
SLC13A3-204ENST00000413164 UGGT1Q9NYU2 1555 aa28.52■■■□□ 2.16
SLC13A3-204ENST00000413164 KIAA1210Q9ULL0 1709 aa28.52■■■□□ 2.16
SLC13A3-204ENST00000413164 GGT6Q6P531 493 aa28.5■■■□□ 2.15
SLC13A3-204ENST00000413164 ARHGEF40Q8TER5 1519 aa28.5■■■□□ 2.15
SLC13A3-204ENST00000413164 NEFLP07196 543 aa28.5■■■□□ 2.15
SLC13A3-204ENST00000413164 KIF1BO60333 1816 aa28.5■■■□□ 2.15
SLC13A3-204ENST00000413164 RALBP1Q15311 655 aa28.49■■■□□ 2.15
SLC13A3-204ENST00000413164 MYOM2P54296 1465 aa28.49■■■□□ 2.15
SLC13A3-204ENST00000413164 PER1O15534 1290 aaPredicted RBP28.48■■■□□ 2.15
SLC13A3-204ENST00000413164 IFT172Q9UG01 1749 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms