RNA–Protein interactions for RNA: ENST00000413081.1

TNRC18-204, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 3

Gene TNRC18, Length 925 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-204ENST00000413081 TNRQ92752 1358 aa30.25■■■□□ 2.43
TNRC18-204ENST00000413081 KDM5DQ9BY66 1539 aa30.23■■■□□ 2.43
TNRC18-204ENST00000413081 KIF3BO15066 747 aa30.23■■■□□ 2.43
TNRC18-204ENST00000413081 SCAF1Q9H7N4 1312 aaKnown RBP30.22■■■□□ 2.43
TNRC18-204ENST00000413081 CCDC141Q6ZP82 1450 aa30.22■■■□□ 2.43
TNRC18-204ENST00000413081 FAM135AQ9P2D6 1515 aa30.22■■■□□ 2.43
TNRC18-204ENST00000413081 PZPP20742 1482 aa30.2■■■□□ 2.43
TNRC18-204ENST00000413081 CPS1P31327 1500 aa30.2■■■□□ 2.42
TNRC18-204ENST00000413081 FBXO31Q5XUX0 539 aaPredicted RBP30.19■■■□□ 2.42
TNRC18-204ENST00000413081 NEURL4Q96JN8 1562 aa30.19■■■□□ 2.42
TNRC18-204ENST00000413081 CAMSAP2Q08AD1 1489 aa30.18■■■□□ 2.42
TNRC18-204ENST00000413081 WASHC2CQ9Y4E1 1318 aa30.17■■■□□ 2.42
TNRC18-204ENST00000413081 PIP4K2BP78356 416 aa30.16■■■□□ 2.42
TNRC18-204ENST00000413081 SHANK2Q9UPX8 1470 aa30.15■■■□□ 2.42
TNRC18-204ENST00000413081 TOM1O60784 492 aa30.15■■■□□ 2.42
TNRC18-204ENST00000413081 RSPH4AQ5TD94 716 aa30.14■■■□□ 2.42
TNRC18-204ENST00000413081 ANKLE2Q86XL3 938 aa30.13■■■□□ 2.41
TNRC18-204ENST00000413081 NCOA2Q15596 1464 aa30.12■■■□□ 2.41
TNRC18-204ENST00000413081 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.11■■■□□ 2.41
TNRC18-204ENST00000413081 HSPA1LP34931 641 aa30.1■■■□□ 2.41
TNRC18-204ENST00000413081 THEMISQ8N1K5 641 aaPredicted RBP30.1■■■□□ 2.41
TNRC18-204ENST00000413081 NLRP1Q9C000 1473 aa30.1■■■□□ 2.41
TNRC18-204ENST00000413081 UGGT1Q9NYU2 1555 aa30.09■■■□□ 2.41
TNRC18-204ENST00000413081 MIA2Q96PC5 1412 aa30.08■■■□□ 2.41
TNRC18-204ENST00000413081 MED1Q15648 1581 aaPredicted RBP30.07■■■□□ 2.4
TNRC18-204ENST00000413081 ARHGEF5Q12774 1597 aa30.06■■■□□ 2.4
TNRC18-204ENST00000413081 DEPDC5O75140 1603 aa30.05■■■□□ 2.4
TNRC18-204ENST00000413081 TSPY4P0CV99 314 aa30.05■■■□□ 2.4
TNRC18-204ENST00000413081 TSPY10P0CW01 314 aa30.05■■■□□ 2.4
TNRC18-204ENST00000413081 VWDEQ8N2E2 1590 aa30.05■■■□□ 2.4
TNRC18-204ENST00000413081 NPHP4O75161 1426 aaPredicted RBP30.05■■■□□ 2.4
TNRC18-204ENST00000413081 MED14O60244 1454 aa30.01■■■□□ 2.4
TNRC18-204ENST00000413081 IQGAP1P46940 1657 aa30.01■■■□□ 2.39
TNRC18-204ENST00000413081 ZC3H13Q5T200 1668 aaKnown RBP29.99■■■□□ 2.39
TNRC18-204ENST00000413081 RNF17Q9BXT8 1623 aaKnown RBP29.98■■■□□ 2.39
TNRC18-204ENST00000413081 ABCC3O15438 1527 aa29.95■■■□□ 2.38
TNRC18-204ENST00000413081 PHF23Q9BUL5 403 aaPredicted RBP29.92■■■□□ 2.38
TNRC18-204ENST00000413081 MAST1Q9Y2H9 1570 aa29.92■■■□□ 2.38
TNRC18-204ENST00000413081 EIF2AK4Q9P2K8 1649 aaKnown RBP29.92■■■□□ 2.38
TNRC18-204ENST00000413081 ALKQ9UM73 1620 aa29.89■■■□□ 2.38
TNRC18-204ENST00000413081 ERVK-7P63135 1459 aa29.89■■■□□ 2.38
TNRC18-204ENST00000413081 SYNMO15061 1565 aa29.89■■■□□ 2.38
TNRC18-204ENST00000413081 STRCP1A6NGW2 1772 aa29.87■■■□□ 2.37
TNRC18-204ENST00000413081 LRRC9Q6ZRR7 1453 aa29.87■■■□□ 2.37
TNRC18-204ENST00000413081 LRRC7Q96NW7 1537 aa29.86■■■□□ 2.37
TNRC18-204ENST00000413081 CEP152O94986 1710 aa29.85■■■□□ 2.37
TNRC18-204ENST00000413081 SENP3Q9H4L4 574 aaPredicted RBP29.83■■■□□ 2.37
TNRC18-204ENST00000413081 CFAP65Q6ZU64 1925 aaKnown RBP29.83■■■□□ 2.37
TNRC18-204ENST00000413081 UBR1Q8IWV7 1749 aa29.82■■■□□ 2.36
TNRC18-204ENST00000413081 MROH1Q8NDA8 1641 aa29.82■■■□□ 2.36
TNRC18-204ENST00000413081 VPS8Q8N3P4 1428 aa29.8■■■□□ 2.36
TNRC18-204ENST00000413081 SCAF11Q99590 1463 aaKnown RBP29.79■■■□□ 2.36
TNRC18-204ENST00000413081 DUOX2Q9NRD8 1548 aa29.77■■■□□ 2.36
TNRC18-204ENST00000413081 MYOM3Q5VTT5 1437 aa29.75■■■□□ 2.35
TNRC18-204ENST00000413081 TXNDC2Q86VQ3 553 aa29.71■■■□□ 2.35
TNRC18-204ENST00000413081 SLIT1O75093 1534 aa29.71■■■□□ 2.35
TNRC18-204ENST00000413081 PRDM15P57071 1507 aaPredicted RBP29.7■■■□□ 2.34
TNRC18-204ENST00000413081 ARHGAP23Q9P227 1491 aa29.69■■■□□ 2.34
TNRC18-204ENST00000413081 KANK4Q5T7N3 995 aaPredicted RBP29.69■■■□□ 2.34
TNRC18-204ENST00000413081 EID1Q9Y6B2 187 aa29.69■■■□□ 2.34
TNRC18-204ENST00000413081 MAP3K1Q13233 1512 aa29.69■■■□□ 2.34
TNRC18-204ENST00000413081 KIF15Q9NS87 1388 aa29.68■■■□□ 2.34
TNRC18-204ENST00000413081 LTKP29376 864 aa29.68■■■□□ 2.34
TNRC18-204ENST00000413081 ARHGAP31Q2M1Z3 1444 aa29.68■■■□□ 2.34
TNRC18-204ENST00000413081 ERBINQ96RT1 1412 aa29.66■■■□□ 2.34
TNRC18-204ENST00000413081 CROCC2H7BZ55 1655 aa29.65■■■□□ 2.34
TNRC18-204ENST00000413081 XIRP1Q702N8 1843 aaKnown RBP29.64■■■□□ 2.33
TNRC18-204ENST00000413081 PIK3C2BO00750 1634 aa29.63■■■□□ 2.33
TNRC18-204ENST00000413081 STAG3Q9UJ98 1225 aa29.63■■■□□ 2.33
TNRC18-204ENST00000413081 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.62■■■□□ 2.331e-6■■□□□ 12
TNRC18-204ENST00000413081 RRP7BPQ9NSQ0 103 aa29.61■■■□□ 2.33
TNRC18-204ENST00000413081 KANK1Q14678 1352 aa29.61■■■□□ 2.33
TNRC18-204ENST00000413081 TMEM2Q9UHN6 1383 aa29.58■■■□□ 2.33
TNRC18-204ENST00000413081 PTPN23Q9H3S7 1636 aa29.57■■■□□ 2.32
TNRC18-204ENST00000413081 ABCC5O15440 1437 aa29.57■■■□□ 2.32
TNRC18-204ENST00000413081 KDM5AP29375 1690 aaKnown RBP29.55■■■□□ 2.32
TNRC18-204ENST00000413081 EFCAB6Q5THR3 1501 aa29.55■■■□□ 2.32
TNRC18-204ENST00000413081 LOC105371045A0A1W2PR82 267 aa29.54■■■□□ 2.32
TNRC18-204ENST00000413081 DAPK1P53355 1430 aa29.52■■■□□ 2.32
TNRC18-204ENST00000413081 FAM135BQ49AJ0 1406 aa29.52■■■□□ 2.32
TNRC18-204ENST00000413081 TMEM94Q12767 1356 aa29.5■■■□□ 2.31
TNRC18-204ENST00000413081 APLP2Q06481 763 aa29.49■■■□□ 2.31
TNRC18-204ENST00000413081 RGS17Q9UGC6 210 aaPredicted RBP29.49■■■□□ 2.31
TNRC18-204ENST00000413081 LMTK2Q8IWU2 1503 aa29.47■■■□□ 2.31
TNRC18-204ENST00000413081 KCNA6P17658 529 aa29.47■■■□□ 2.31
TNRC18-204ENST00000413081 IDI1Q13907 227 aa29.47■■■□□ 2.31
TNRC18-204ENST00000413081 ANKRD30AQ9BXX3 1397 aa29.46■■■□□ 2.31
TNRC18-204ENST00000413081 ROBO1Q9Y6N7 1651 aa29.45■■■□□ 2.31
TNRC18-204ENST00000413081 SLC26A8Q96RN1 970 aa29.45■■■□□ 2.31
TNRC18-204ENST00000413081 PROSER2Q86WR7 435 aaPredicted RBP29.44■■■□□ 2.3
TNRC18-204ENST00000413081 CHIC2Q9UKJ5 165 aa29.43■■■□□ 2.3
TNRC18-204ENST00000413081 FGD6Q6ZV73 1430 aa29.43■■■□□ 2.3
TNRC18-204ENST00000413081 ADGRB3O60242 1522 aa29.42■■■□□ 2.3
TNRC18-204ENST00000413081 TET3O43151 1660 aa29.42■■■□□ 2.3
TNRC18-204ENST00000413081 BCANQ96GW7 911 aa29.4■■■□□ 2.3
TNRC18-204ENST00000413081 NKTRP30414 1462 aaKnown RBP29.4■■■□□ 2.3
TNRC18-204ENST00000413081 RBM33Q96EV2 1170 aaKnown RBP29.39■■■□□ 2.3
TNRC18-204ENST00000413081 NOS1P29475 1434 aa29.38■■■□□ 2.29
TNRC18-204ENST00000413081 NWD1Q149M9 1564 aa29.38■■■□□ 2.29
TNRC18-204ENST00000413081 MSH6P52701 1360 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms