RNA–Protein interactions for RNA: ENST00000412466.1

PMS2P4-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 4, humanhuman

BASIC

Gene PMS2P4, Length 1,052 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P4-201ENST00000412466 PKD2Q13563 968 aa25.69■■□□□ 1.7
PMS2P4-201ENST00000412466 DHX29Q7Z478 1369 aaKnown RBP25.69■■□□□ 1.7
PMS2P4-201ENST00000412466 KDM5DQ9BY66 1539 aa25.67■■□□□ 1.7
PMS2P4-201ENST00000412466 TCOF1Q13428 1488 aaKnown RBP25.66■■□□□ 1.7
PMS2P4-201ENST00000412466 NCKAP5LQ9HCH0 1330 aa25.66■■□□□ 1.7
PMS2P4-201ENST00000412466 A2ML1A8K2U0 1454 aa25.66■■□□□ 1.7
PMS2P4-201ENST00000412466 DISP3Q9P2K9 1392 aa25.65■■□□□ 1.7
PMS2P4-201ENST00000412466 FGD6Q6ZV73 1430 aa25.64■■□□□ 1.7
PMS2P4-201ENST00000412466 RSPH4AQ5TD94 716 aa25.64■■□□□ 1.7
PMS2P4-201ENST00000412466 ARHGEF5Q12774 1597 aa25.64■■□□□ 1.69
PMS2P4-201ENST00000412466 SPATA31D1Q6ZQQ2 1576 aa25.62■■□□□ 1.69
PMS2P4-201ENST00000412466 DNMT1P26358 1616 aaKnown RBP25.61■■□□□ 1.69
PMS2P4-201ENST00000412466 POLR1AO95602 1720 aaPredicted RBP25.6■■□□□ 1.69
PMS2P4-201ENST00000412466 KIF3BO15066 747 aa25.6■■□□□ 1.69
PMS2P4-201ENST00000412466 PZPP20742 1482 aa25.6■■□□□ 1.69
PMS2P4-201ENST00000412466 PTPN23Q9H3S7 1636 aa25.59■■□□□ 1.69
PMS2P4-201ENST00000412466 ZNF335Q9H4Z2 1342 aaPredicted RBP25.59■■□□□ 1.69
PMS2P4-201ENST00000412466 TNRQ92752 1358 aa25.58■■□□□ 1.69
PMS2P4-201ENST00000412466 TSPY4P0CV99 314 aa25.54■■□□□ 1.68
PMS2P4-201ENST00000412466 TSPY10P0CW01 314 aa25.54■■□□□ 1.68
PMS2P4-201ENST00000412466 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.54■■□□□ 1.68
PMS2P4-201ENST00000412466 WASHC2CQ9Y4E1 1318 aa25.53■■□□□ 1.68
PMS2P4-201ENST00000412466 ZC3H13Q5T200 1668 aaKnown RBP25.52■■□□□ 1.68
PMS2P4-201ENST00000412466 MAST1Q9Y2H9 1570 aa25.52■■□□□ 1.68
PMS2P4-201ENST00000412466 RRBP1Q9P2E9 1410 aaKnown RBP25.51■■□□□ 1.67
PMS2P4-201ENST00000412466 RNF17Q9BXT8 1623 aaKnown RBP25.51■■□□□ 1.67
PMS2P4-201ENST00000412466 UBAP1LF5GYI3 381 aa25.5■■□□□ 1.67
PMS2P4-201ENST00000412466 NLRP1Q9C000 1473 aa25.5■■□□□ 1.67
PMS2P4-201ENST00000412466 EIF2AK4Q9P2K8 1649 aaKnown RBP25.49■■□□□ 1.67
PMS2P4-201ENST00000412466 FAM50AQ14320 339 aaKnown RBP25.49■■□□□ 1.67
PMS2P4-201ENST00000412466 NEURL4Q96JN8 1562 aa25.48■■□□□ 1.67
PMS2P4-201ENST00000412466 CPS1P31327 1500 aa25.47■■□□□ 1.67
PMS2P4-201ENST00000412466 FBXO31Q5XUX0 539 aaPredicted RBP25.46■■□□□ 1.67
PMS2P4-201ENST00000412466 UGGT1Q9NYU2 1555 aa25.45■■□□□ 1.66
PMS2P4-201ENST00000412466 ABCC3O15438 1527 aa25.42■■□□□ 1.66
PMS2P4-201ENST00000412466 THEMISQ8N1K5 641 aaPredicted RBP25.42■■□□□ 1.66
PMS2P4-201ENST00000412466 DEPDC5O75140 1603 aa25.41■■□□□ 1.66
PMS2P4-201ENST00000412466 ANKLE2Q86XL3 938 aa25.41■■□□□ 1.66
PMS2P4-201ENST00000412466 ILDR2Q71H61 639 aa25.4■■□□□ 1.66
PMS2P4-201ENST00000412466 SHANK2Q9UPX8 1470 aa25.4■■□□□ 1.66
PMS2P4-201ENST00000412466 DAPK1P53355 1430 aa25.39■■□□□ 1.66
PMS2P4-201ENST00000412466 ABCC5O15440 1437 aa25.38■■□□□ 1.65
PMS2P4-201ENST00000412466 CROCC2H7BZ55 1655 aa25.37■■□□□ 1.65
PMS2P4-201ENST00000412466 SOCS7O14512 581 aa25.37■■□□□ 1.65
PMS2P4-201ENST00000412466 DUOX2Q9NRD8 1548 aa25.37■■□□□ 1.65
PMS2P4-201ENST00000412466 NPHP4O75161 1426 aaPredicted RBP25.37■■□□□ 1.65
PMS2P4-201ENST00000412466 IQGAP1P46940 1657 aa25.36■■□□□ 1.65
PMS2P4-201ENST00000412466 MED14O60244 1454 aa25.36■■□□□ 1.65
PMS2P4-201ENST00000412466 CEP152O94986 1710 aa25.35■■□□□ 1.65
PMS2P4-201ENST00000412466 ERVK-7P63135 1459 aa25.34■■□□□ 1.65
PMS2P4-201ENST00000412466 MROH1Q8NDA8 1641 aa25.34■■□□□ 1.65
PMS2P4-201ENST00000412466 VWDEQ8N2E2 1590 aa25.34■■□□□ 1.65
PMS2P4-201ENST00000412466 SCAF1Q9H7N4 1312 aaKnown RBP25.33■■□□□ 1.64
PMS2P4-201ENST00000412466 TOM1O60784 492 aa25.31■■□□□ 1.64
PMS2P4-201ENST00000412466 PRDM15P57071 1507 aaPredicted RBP25.28■■□□□ 1.64
PMS2P4-201ENST00000412466 SYNMO15061 1565 aa25.28■■□□□ 1.64
PMS2P4-201ENST00000412466 ERBINQ96RT1 1412 aa25.28■■□□□ 1.64
PMS2P4-201ENST00000412466 ANKRD30AQ9BXX3 1397 aa25.27■■□□□ 1.64
PMS2P4-201ENST00000412466 KIF15Q9NS87 1388 aa25.27■■□□□ 1.64
PMS2P4-201ENST00000412466 UBR1Q8IWV7 1749 aa25.26■■□□□ 1.63
PMS2P4-201ENST00000412466 ITGAEP38570 1179 aa25.25■■□□□ 1.63
PMS2P4-201ENST00000412466 PIP4K2BP78356 416 aa25.25■■□□□ 1.63
PMS2P4-201ENST00000412466 ROCK1Q13464 1354 aa25.25■■□□□ 1.63
PMS2P4-201ENST00000412466 ADGRL2O95490 1459 aa25.25■■□□□ 1.63
PMS2P4-201ENST00000412466 CHIC2Q9UKJ5 165 aa25.23■■□□□ 1.63
PMS2P4-201ENST00000412466 CFAP65Q6ZU64 1925 aaKnown RBP25.22■■□□□ 1.63
PMS2P4-201ENST00000412466 SCAF11Q99590 1463 aaKnown RBP25.21■■□□□ 1.63
PMS2P4-201ENST00000412466 ARHGAP31Q2M1Z3 1444 aa25.2■■□□□ 1.63
PMS2P4-201ENST00000412466 MED1Q15648 1581 aaPredicted RBP25.19■■□□□ 1.62
PMS2P4-201ENST00000412466 HSPA1LP34931 641 aa25.19■■□□□ 1.62
PMS2P4-201ENST00000412466 KANK1Q14678 1352 aa25.18■■□□□ 1.62
PMS2P4-201ENST00000412466 RRP7BPQ9NSQ0 103 aa25.18■■□□□ 1.62
PMS2P4-201ENST00000412466 STRCP1A6NGW2 1772 aa25.17■■□□□ 1.62
PMS2P4-201ENST00000412466 SLIT1O75093 1534 aa25.17■■□□□ 1.62
PMS2P4-201ENST00000412466 TRIM26Q12899 539 aaPredicted RBP25.16■■□□□ 1.62
PMS2P4-201ENST00000412466 LRRC7Q96NW7 1537 aa25.16■■□□□ 1.62
PMS2P4-201ENST00000412466 ARHGAP23Q9P227 1491 aa25.15■■□□□ 1.62
PMS2P4-201ENST00000412466 PIK3C2BO00750 1634 aa25.12■■□□□ 1.61
PMS2P4-201ENST00000412466 ALKQ9UM73 1620 aa25.12■■□□□ 1.61
PMS2P4-201ENST00000412466 KDM5AP29375 1690 aaKnown RBP25.11■■□□□ 1.61
PMS2P4-201ENST00000412466 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.11■■□□□ 1.61
PMS2P4-201ENST00000412466 EID1Q9Y6B2 187 aa25.1■■□□□ 1.61
PMS2P4-201ENST00000412466 LMTK2Q8IWU2 1503 aa25.1■■□□□ 1.61
PMS2P4-201ENST00000412466 TXNDC2Q86VQ3 553 aa25.08■■□□□ 1.61
PMS2P4-201ENST00000412466 HFM1A2PYH4 1435 aa25.07■■□□□ 1.6
PMS2P4-201ENST00000412466 ANKRD50Q9ULJ7 1429 aa25.07■■□□□ 1.6
PMS2P4-201ENST00000412466 STAG3Q9UJ98 1225 aa25.07■■□□□ 1.6
PMS2P4-201ENST00000412466 EFCAB6Q5THR3 1501 aa25.07■■□□□ 1.6
PMS2P4-201ENST00000412466 GCC2Q8IWJ2 1684 aa25.04■■□□□ 1.6
PMS2P4-201ENST00000412466 TMEM2Q9UHN6 1383 aa25.04■■□□□ 1.6
PMS2P4-201ENST00000412466 NAIPQ13075 1403 aa25.03■■□□□ 1.6
PMS2P4-201ENST00000412466 LTKP29376 864 aa25.03■■□□□ 1.6
PMS2P4-201ENST00000412466 PHF23Q9BUL5 403 aaPredicted RBP25.03■■□□□ 1.6
PMS2P4-201ENST00000412466 ACIN1Q9UKV3 1341 aaKnown RBP25.03■■□□□ 1.6
PMS2P4-201ENST00000412466 ADGRB3O60242 1522 aa25.01■■□□□ 1.59
PMS2P4-201ENST00000412466 XIRP1Q702N8 1843 aaKnown RBP24.98■■□□□ 1.59
PMS2P4-201ENST00000412466 NOS1P29475 1434 aa24.95■■□□□ 1.59
PMS2P4-201ENST00000412466 SETD5Q9C0A6 1442 aa24.95■■□□□ 1.59
PMS2P4-201ENST00000412466 SENP3Q9H4L4 574 aaPredicted RBP24.95■■□□□ 1.58
PMS2P4-201ENST00000412466 RPRD2Q5VT52 1461 aaKnown RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms