RNA–Protein interactions for RNA: ENST00000411840.6

MRPL48-204, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 1 (best) BASIC

Gene MRPL48, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-204ENST00000411840 ILDR2Q71H61 639 aa14.51□□□□□ -0.09
MRPL48-204ENST00000411840 MYO3AQ8NEV4 1616 aa14.51□□□□□ -0.09
MRPL48-204ENST00000411840 CEP170BQ9Y4F5 1589 aaPredicted RBP14.51□□□□□ -0.09
MRPL48-204ENST00000411840 CCDC141Q6ZP82 1450 aa14.5□□□□□ -0.09
MRPL48-204ENST00000411840 UBAP1LF5GYI3 381 aa14.5□□□□□ -0.09
MRPL48-204ENST00000411840 TSPY4P0CV99 314 aa14.5□□□□□ -0.09
MRPL48-204ENST00000411840 TSPY10P0CW01 314 aa14.5□□□□□ -0.09
MRPL48-204ENST00000411840 A2ML1A8K2U0 1454 aa14.49□□□□□ -0.09
MRPL48-204ENST00000411840 CAMSAP2Q08AD1 1489 aa14.49□□□□□ -0.09
MRPL48-204ENST00000411840 TNRQ92752 1358 aa14.47□□□□□ -0.09
MRPL48-204ENST00000411840 ZNF142P52746 1687 aaPredicted RBP14.47□□□□□ -0.09
MRPL48-204ENST00000411840 LOC105371045A0A1W2PR82 267 aa14.47□□□□□ -0.09
MRPL48-204ENST00000411840 DNMT1P26358 1616 aaKnown RBP14.44□□□□□ -0.1
MRPL48-204ENST00000411840 PZPP20742 1482 aa14.44□□□□□ -0.1
MRPL48-204ENST00000411840 MIA2Q96PC5 1412 aa14.44□□□□□ -0.1
MRPL48-204ENST00000411840 ANKLE2Q86XL3 938 aa14.44□□□□□ -0.1
MRPL48-204ENST00000411840 THEMISQ8N1K5 641 aaPredicted RBP14.44□□□□□ -0.1
MRPL48-204ENST00000411840 KDM5DQ9BY66 1539 aa14.44□□□□□ -0.1
MRPL48-204ENST00000411840 LRRC9Q6ZRR7 1453 aa14.44□□□□□ -0.1
MRPL48-204ENST00000411840 SOCS7O14512 581 aa14.43□□□□□ -0.1
MRPL48-204ENST00000411840 KCNA4P22459 653 aa14.43□□□□□ -0.1
MRPL48-204ENST00000411840 VPS8Q8N3P4 1428 aa14.42□□□□□ -0.1
MRPL48-204ENST00000411840 KANK4Q5T7N3 995 aaPredicted RBP14.42□□□□□ -0.1
MRPL48-204ENST00000411840 ARHGEF5Q12774 1597 aa14.42□□□□□ -0.1
MRPL48-204ENST00000411840 FAM135AQ9P2D6 1515 aa14.41□□□□□ -0.1
MRPL48-204ENST00000411840 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.41□□□□□ -0.1
MRPL48-204ENST00000411840 SPATA31D1Q6ZQQ2 1576 aa14.39□□□□□ -0.11
MRPL48-204ENST00000411840 NLRP1Q9C000 1473 aa14.38□□□□□ -0.11
MRPL48-204ENST00000411840 SHANK2Q9UPX8 1470 aa14.38□□□□□ -0.11
MRPL48-204ENST00000411840 TOM1O60784 492 aa14.37□□□□□ -0.11
MRPL48-204ENST00000411840 PIP4K2BP78356 416 aa14.37□□□□□ -0.11
MRPL48-204ENST00000411840 NEURL4Q96JN8 1562 aa14.37□□□□□ -0.11
MRPL48-204ENST00000411840 SCAF1Q9H7N4 1312 aaKnown RBP14.37□□□□□ -0.11
MRPL48-204ENST00000411840 UGGT1Q9NYU2 1555 aa14.36□□□□□ -0.11
MRPL48-204ENST00000411840 NPHP4O75161 1426 aaPredicted RBP14.35□□□□□ -0.11
MRPL48-204ENST00000411840 CPS1P31327 1500 aa14.35□□□□□ -0.11
MRPL48-204ENST00000411840 MAP3K1Q13233 1512 aa14.35□□□□□ -0.11
MRPL48-204ENST00000411840 MAST1Q9Y2H9 1570 aa14.34□□□□□ -0.11
MRPL48-204ENST00000411840 MYOM3Q5VTT5 1437 aa14.34□□□□□ -0.11
MRPL48-204ENST00000411840 MED14O60244 1454 aa14.34□□□□□ -0.11
MRPL48-204ENST00000411840 HSPA1LP34931 641 aa14.34□□□□□ -0.11
MRPL48-204ENST00000411840 PPP4R3CPQ6ZMV5 832 aa14.34□□□□□ -0.11
MRPL48-204ENST00000411840 ABCC3O15438 1527 aa14.34□□□□□ -0.11
MRPL48-204ENST00000411840 RRP7BPQ9NSQ0 103 aa14.32□□□□□ -0.12
MRPL48-204ENST00000411840 RNF17Q9BXT8 1623 aaKnown RBP14.32□□□□□ -0.12
MRPL48-204ENST00000411840 VWDEQ8N2E2 1590 aa14.31□□□□□ -0.12
MRPL48-204ENST00000411840 POLR1AO95602 1720 aaPredicted RBP14.31□□□□□ -0.12
MRPL48-204ENST00000411840 ERVK-7P63135 1459 aa14.31□□□□□ -0.12
MRPL48-204ENST00000411840 APLP2Q06481 763 aa14.3□□□□□ -0.12
MRPL48-204ENST00000411840 DUOX2Q9NRD8 1548 aa14.3□□□□□ -0.12
MRPL48-204ENST00000411840 DEPDC5O75140 1603 aa14.3□□□□□ -0.12
MRPL48-204ENST00000411840 KIF15Q9NS87 1388 aa14.29□□□□□ -0.12
MRPL48-204ENST00000411840 EIF2AK4Q9P2K8 1649 aaKnown RBP14.29□□□□□ -0.12
MRPL48-204ENST00000411840 ABCC5O15440 1437 aa14.28□□□□□ -0.12
MRPL48-204ENST00000411840 MROH1Q8NDA8 1641 aa14.28□□□□□ -0.12
MRPL48-204ENST00000411840 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.28□□□□□ -0.12
MRPL48-204ENST00000411840 ZC3H13Q5T200 1668 aaKnown RBP14.27□□□□□ -0.12
MRPL48-204ENST00000411840 LTKP29376 864 aa14.27□□□□□ -0.13
MRPL48-204ENST00000411840 TXNDC2Q86VQ3 553 aa14.27□□□□□ -0.13
MRPL48-204ENST00000411840 ARHGAP31Q2M1Z3 1444 aa14.25□□□□□ -0.13
MRPL48-204ENST00000411840 LRRC7Q96NW7 1537 aa14.25□□□□□ -0.13
MRPL48-204ENST00000411840 ERBINQ96RT1 1412 aa14.24□□□□□ -0.13
MRPL48-204ENST00000411840 IQGAP1P46940 1657 aa14.24□□□□□ -0.13
MRPL48-204ENST00000411840 CHIC2Q9UKJ5 165 aa14.24□□□□□ -0.13
MRPL48-204ENST00000411840 EID1Q9Y6B2 187 aa14.24□□□□□ -0.13
MRPL48-204ENST00000411840 SCAF11Q99590 1463 aaKnown RBP14.23□□□□□ -0.13
MRPL48-204ENST00000411840 DAPK1P53355 1430 aa14.23□□□□□ -0.13
MRPL48-204ENST00000411840 KANK1Q14678 1352 aa14.22□□□□□ -0.13
MRPL48-204ENST00000411840 ALKQ9UM73 1620 aa14.22□□□□□ -0.13
MRPL48-204ENST00000411840 PRDM15P57071 1507 aaPredicted RBP14.21□□□□□ -0.13
MRPL48-204ENST00000411840 ARHGAP23Q9P227 1491 aa14.21□□□□□ -0.13
MRPL48-204ENST00000411840 STAG3Q9UJ98 1225 aa14.21□□□□□ -0.13
MRPL48-204ENST00000411840 PTPN23Q9H3S7 1636 aa14.21□□□□□ -0.13
MRPL48-204ENST00000411840 FGD6Q6ZV73 1430 aa14.21□□□□□ -0.13
MRPL48-204ENST00000411840 ANKRD30AQ9BXX3 1397 aa14.21□□□□□ -0.14
MRPL48-204ENST00000411840 IDI1Q13907 227 aa14.2□□□□□ -0.14
MRPL48-204ENST00000411840 CEP152O94986 1710 aa14.2□□□□□ -0.14
MRPL48-204ENST00000411840 UBR1Q8IWV7 1749 aa14.2□□□□□ -0.14
MRPL48-204ENST00000411840 TMEM2Q9UHN6 1383 aa14.2□□□□□ -0.14
MRPL48-204ENST00000411840 SLIT1O75093 1534 aa14.2□□□□□ -0.14
MRPL48-204ENST00000411840 MED1Q15648 1581 aaPredicted RBP14.19□□□□□ -0.14
MRPL48-204ENST00000411840 MSH5O43196 834 aa14.19□□□□□ -0.14
MRPL48-204ENST00000411840 STRCP1A6NGW2 1772 aa14.17□□□□□ -0.14
MRPL48-204ENST00000411840 CROCC2H7BZ55 1655 aa14.16□□□□□ -0.14
MRPL48-204ENST00000411840 LMTK2Q8IWU2 1503 aa14.15□□□□□ -0.14
MRPL48-204ENST00000411840 SYNMO15061 1565 aa14.15□□□□□ -0.14
MRPL48-204ENST00000411840 SLC26A8Q96RN1 970 aa14.15□□□□□ -0.14
MRPL48-204ENST00000411840 FAM50AQ14320 339 aaKnown RBP14.14□□□□□ -0.15
MRPL48-204ENST00000411840 SLC52A1Q9NWF4 448 aa14.14□□□□□ -0.15
MRPL48-204ENST00000411840 PIK3C2BO00750 1634 aa14.14□□□□□ -0.15
MRPL48-204ENST00000411840 KCNA6P17658 529 aa14.13□□□□□ -0.15
MRPL48-204ENST00000411840 EFCAB6Q5THR3 1501 aa14.13□□□□□ -0.15
MRPL48-204ENST00000411840 PROSER2Q86WR7 435 aaPredicted RBP14.12□□□□□ -0.15
MRPL48-204ENST00000411840 NOS1P29475 1434 aa14.12□□□□□ -0.15
MRPL48-204ENST00000411840 TMEM94Q12767 1356 aa14.11□□□□□ -0.15
MRPL48-204ENST00000411840 RBM33Q96EV2 1170 aaKnown RBP14.11□□□□□ -0.15
MRPL48-204ENST00000411840 BCANQ96GW7 911 aa14.11□□□□□ -0.15
MRPL48-204ENST00000411840 ADGRL2O95490 1459 aa14.1□□□□□ -0.15
MRPL48-204ENST00000411840 FAM135BQ49AJ0 1406 aa14.09□□□□□ -0.15
MRPL48-204ENST00000411840 TET3O43151 1660 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms