RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 KIF3BO15066 747 aa27.68■■■□□ 2.02
CDC42-204ENST00000411827 KANK1Q14678 1352 aa27.64■■■□□ 2.02
CDC42-204ENST00000411827 RNF17Q9BXT8 1623 aaKnown RBP27.62■■■□□ 2.01
CDC42-204ENST00000411827 FAM135AQ9P2D6 1515 aa27.62■■■□□ 2.01
CDC42-204ENST00000411827 UNC13BO14795 1591 aa27.6■■■□□ 2.01
CDC42-204ENST00000411827 DEPDC5O75140 1603 aa27.6■■■□□ 2.01
CDC42-204ENST00000411827 TRIM52Q96A61 297 aa27.59■■■□□ 2.01
CDC42-204ENST00000411827 ARID4BQ4LE39 1312 aaPredicted RBP27.58■■■□□ 2.01
CDC42-204ENST00000411827 NUP155O75694 1391 aa27.58■■■□□ 2.01
CDC42-204ENST00000411827 KDM5DQ9BY66 1539 aa27.57■■■□□ 2
CDC42-204ENST00000411827 PRDM15P57071 1507 aaPredicted RBP27.57■■■□□ 2
CDC42-204ENST00000411827 GGT6Q6P531 493 aa27.54■■■□□ 2
CDC42-204ENST00000411827 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.52■■■□□ 2
CDC42-204ENST00000411827 VWDEQ8N2E2 1590 aa27.51■■□□□ 1.99
CDC42-204ENST00000411827 IQGAP3Q86VI3 1631 aa27.5■■□□□ 1.99
CDC42-204ENST00000411827 WASHC2CQ9Y4E1 1318 aa27.49■■□□□ 1.99
CDC42-204ENST00000411827 MROH1Q8NDA8 1641 aa27.49■■□□□ 1.99
CDC42-204ENST00000411827 LMTK2Q8IWU2 1503 aa27.48■■□□□ 1.99
CDC42-204ENST00000411827 SLC4A1APQ9BWU0 796 aaKnown RBP27.48■■□□□ 1.99
CDC42-204ENST00000411827 ESF1Q9H501 851 aaKnown RBP27.48■■□□□ 1.99
CDC42-204ENST00000411827 MPHOSPH9Q99550 1183 aa27.47■■□□□ 1.99
CDC42-204ENST00000411827 CNTLNQ9NXG0 1405 aa27.47■■□□□ 1.99
CDC42-204ENST00000411827 ZC3H13Q5T200 1668 aaKnown RBP27.46■■□□□ 1.99
CDC42-204ENST00000411827 PZPP20742 1482 aa27.44■■□□□ 1.98
CDC42-204ENST00000411827 SIGLEC1Q9BZZ2 1709 aa27.44■■□□□ 1.98
CDC42-204ENST00000411827 CLSPNQ9HAW4 1339 aa27.41■■□□□ 1.98
CDC42-204ENST00000411827 ABCC3O15438 1527 aa27.41■■□□□ 1.98
CDC42-204ENST00000411827 ARHGAP31Q2M1Z3 1444 aa27.4■■□□□ 1.98
CDC42-204ENST00000411827 TET3O43151 1660 aa27.4■■□□□ 1.98
CDC42-204ENST00000411827 RPRD2Q5VT52 1461 aaKnown RBP27.39■■□□□ 1.98
CDC42-204ENST00000411827 DHX57Q6P158 1386 aaKnown RBP27.39■■□□□ 1.98
CDC42-204ENST00000411827 MLECQ14165 292 aa27.39■■□□□ 1.98
CDC42-204ENST00000411827 PKD2Q13563 968 aa27.37■■□□□ 1.97
CDC42-204ENST00000411827 EFCAB6Q5THR3 1501 aa27.35■■□□□ 1.97
CDC42-204ENST00000411827 MROH2AA6NES4 1674 aa27.31■■□□□ 1.96
CDC42-204ENST00000411827 CCER1Q8TC90 406 aaPredicted RBP27.31■■□□□ 1.96
CDC42-204ENST00000411827 CAMSAP1Q5T5Y3 1602 aa27.3■■□□□ 1.96
CDC42-204ENST00000411827 CEP152O94986 1710 aa27.3■■□□□ 1.96
CDC42-204ENST00000411827 ADAMTSL3P82987 1691 aa27.29■■□□□ 1.96
CDC42-204ENST00000411827 ZMYM3Q14202 1370 aa27.28■■□□□ 1.96
CDC42-204ENST00000411827 CLTCQ00610 1675 aaKnown RBP27.27■■□□□ 1.96
CDC42-204ENST00000411827 NPATQ14207 1427 aa27.26■■□□□ 1.95
CDC42-204ENST00000411827 FER1L4A9Z1Z3 1794 aa27.26■■□□□ 1.95
CDC42-204ENST00000411827 PTPRTO14522 1441 aa27.24■■□□□ 1.95
CDC42-204ENST00000411827 E9PCH4 1651 aa27.24■■□□□ 1.95
CDC42-204ENST00000411827 ANKRD30BQ9BXX2 1392 aa27.23■■□□□ 1.95
CDC42-204ENST00000411827 MADDQ8WXG6 1647 aa27.19■■□□□ 1.94
CDC42-204ENST00000411827 NOS1P29475 1434 aa27.19■■□□□ 1.94
CDC42-204ENST00000411827 SLC52A1Q9NWF4 448 aa27.17■■□□□ 1.94
CDC42-204ENST00000411827 TRPM2O94759 1503 aa27.16■■□□□ 1.94
CDC42-204ENST00000411827 ERVK-7P63135 1459 aa27.15■■□□□ 1.94
CDC42-204ENST00000411827 FOXD1Q16676 465 aa27.15■■□□□ 1.94
CDC42-204ENST00000411827 CCDC144AA2RUR9 1427 aa27.15■■□□□ 1.94
CDC42-204ENST00000411827 SPATA31D1Q6ZQQ2 1576 aa27.14■■□□□ 1.93
CDC42-204ENST00000411827 SPHKAPQ2M3C7 1700 aa27.13■■□□□ 1.93
CDC42-204ENST00000411827 PLA2R1Q13018 1463 aa27.13■■□□□ 1.93
CDC42-204ENST00000411827 RIMS1Q86UR5 1692 aaKnown RBP27.12■■□□□ 1.93
CDC42-204ENST00000411827 PREX1Q8TCU6 1659 aa27.11■■□□□ 1.93
CDC42-204ENST00000411827 TIMELESSQ9UNS1 1208 aa27.1■■□□□ 1.93
CDC42-204ENST00000411827 C3P01024 1663 aa27.1■■□□□ 1.93
CDC42-204ENST00000411827 PTPRMP28827 1452 aa27.09■■□□□ 1.93
CDC42-204ENST00000411827 TNRQ92752 1358 aa27.09■■□□□ 1.93
CDC42-204ENST00000411827 FBXO31Q5XUX0 539 aaPredicted RBP27.08■■□□□ 1.93
CDC42-204ENST00000411827 NLRP1Q9C000 1473 aa27.05■■□□□ 1.92
CDC42-204ENST00000411827 CEBPAP49715 358 aaPredicted RBP27.03■■□□□ 1.92
CDC42-204ENST00000411827 NEURL4Q96JN8 1562 aa27.03■■□□□ 1.92
CDC42-204ENST00000411827 SYNMO15061 1565 aa27.02■■□□□ 1.92
CDC42-204ENST00000411827 PIK3C2BO00750 1634 aa27.01■■□□□ 1.92
CDC42-204ENST00000411827 SETD1BQ9UPS6 1966 aaKnown RBP27■■□□□ 1.91
CDC42-204ENST00000411827 CFAP65Q6ZU64 1925 aaKnown RBP27■■□□□ 1.91
CDC42-204ENST00000411827 ZEB1P37275 1124 aaPredicted RBP26.99■■□□□ 1.91
CDC42-204ENST00000411827 IDI1Q13907 227 aa26.99■■□□□ 1.91
CDC42-204ENST00000411827 STAC3Q96MF2 364 aa26.99■■□□□ 1.91
CDC42-204ENST00000411827 SIN3AQ96ST3 1273 aa26.98■■□□□ 1.91
CDC42-204ENST00000411827 CLTCL1P53675 1640 aa26.98■■□□□ 1.91
CDC42-204ENST00000411827 NEUROD1Q13562 356 aa26.97■■□□□ 1.91
CDC42-204ENST00000411827 KDM5AP29375 1690 aaKnown RBP26.95■■□□□ 1.9
CDC42-204ENST00000411827 TONSLQ96HA7 1378 aa26.94■■□□□ 1.9
CDC42-204ENST00000411827 RPGRIP1LQ68CZ1 1315 aa26.93■■□□□ 1.9
CDC42-204ENST00000411827 SPATA31E1Q6ZUB1 1445 aa26.93■■□□□ 1.9
CDC42-204ENST00000411827 STAG3Q9UJ98 1225 aa26.93■■□□□ 1.9
CDC42-204ENST00000411827 KIF1BO60333 1816 aa26.93■■□□□ 1.9
CDC42-204ENST00000411827 UGGT1Q9NYU2 1555 aa26.9■■□□□ 1.9
CDC42-204ENST00000411827 A2ML1A8K2U0 1454 aa26.9■■□□□ 1.9
CDC42-204ENST00000411827 HDGFP51858 240 aaKnown RBP26.89■■□□□ 1.9
CDC42-204ENST00000411827 PLPPR3Q6T4P5 718 aa26.89■■□□□ 1.9
CDC42-204ENST00000411827 ADGRB3O60242 1522 aa26.89■■□□□ 1.89
CDC42-204ENST00000411827 THEMISQ8N1K5 641 aaPredicted RBP26.88■■□□□ 1.89
CDC42-204ENST00000411827 UHRF1BP1Q6BDS2 1440 aa26.88■■□□□ 1.89
CDC42-204ENST00000411827 CHGAP10645 457 aaKnown RBP26.87■■□□□ 1.89
CDC42-204ENST00000411827 TMEM131LA2VDJ0 1609 aa26.86■■□□□ 1.89
CDC42-204ENST00000411827 MYO3AQ8NEV4 1616 aa26.86■■□□□ 1.89
CDC42-204ENST00000411827 RGL3Q3MIN7 710 aa26.83■■□□□ 1.89
CDC42-204ENST00000411827 ZNF326Q5BKZ1 582 aaKnown RBP26.83■■□□□ 1.89
CDC42-204ENST00000411827 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.82■■□□□ 1.88
CDC42-204ENST00000411827 L3MBTL2Q969R5 705 aa26.82■■□□□ 1.88
CDC42-204ENST00000411827 CEP170BQ9Y4F5 1589 aaPredicted RBP26.82■■□□□ 1.88
CDC42-204ENST00000411827 ZNF142P52746 1687 aaPredicted RBP26.82■■□□□ 1.88
CDC42-204ENST00000411827 VGFO15240 615 aaPredicted RBP26.8■■□□□ 1.88
CDC42-204ENST00000411827 UBR1Q8IWV7 1749 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms