RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 CLTCQ00610 1675 aaKnown RBP18.25■□□□□ 0.51
NEDD1-202ENST00000411739 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.22■□□□□ 0.51
NEDD1-202ENST00000411739 C3P01024 1663 aa18.22■□□□□ 0.51
NEDD1-202ENST00000411739 ADGRL2O95490 1459 aa18.22■□□□□ 0.51
NEDD1-202ENST00000411739 CNTLNQ9NXG0 1405 aa18.22■□□□□ 0.51
NEDD1-202ENST00000411739 HSPA2P54652 639 aa18.2■□□□□ 0.5
NEDD1-202ENST00000411739 PPP6R1Q9UPN7 881 aa18.2■□□□□ 0.5
NEDD1-202ENST00000411739 ERBINQ96RT1 1412 aa18.2■□□□□ 0.5
NEDD1-202ENST00000411739 FBXO31Q5XUX0 539 aaPredicted RBP18.2■□□□□ 0.5
NEDD1-202ENST00000411739 ANKRD50Q9ULJ7 1429 aa18.18■□□□□ 0.5
NEDD1-202ENST00000411739 EIF2AK4Q9P2K8 1649 aaKnown RBP18.17■□□□□ 0.5
NEDD1-202ENST00000411739 MROH1Q8NDA8 1641 aa18.17■□□□□ 0.5
NEDD1-202ENST00000411739 RNF17Q9BXT8 1623 aaKnown RBP18.16■□□□□ 0.5
NEDD1-202ENST00000411739 KDM5DQ9BY66 1539 aa18.16■□□□□ 0.5
NEDD1-202ENST00000411739 ROCK1Q13464 1354 aa18.15■□□□□ 0.5
NEDD1-202ENST00000411739 LMTK3Q96Q04 1460 aa18.15■□□□□ 0.5
NEDD1-202ENST00000411739 MROH2AA6NES4 1674 aa18.14■□□□□ 0.49
NEDD1-202ENST00000411739 ABCC3O15438 1527 aa18.13■□□□□ 0.49
NEDD1-202ENST00000411739 CEP152O94986 1710 aa18.12■□□□□ 0.49
NEDD1-202ENST00000411739 KANK1Q14678 1352 aa18.09■□□□□ 0.49
NEDD1-202ENST00000411739 UHRF1BP1Q6BDS2 1440 aa18.09■□□□□ 0.49
NEDD1-202ENST00000411739 PRDM15P57071 1507 aaPredicted RBP18.09■□□□□ 0.49
NEDD1-202ENST00000411739 CFAP65Q6ZU64 1925 aaKnown RBP18.09■□□□□ 0.49
NEDD1-202ENST00000411739 SETD1BQ9UPS6 1966 aaKnown RBP18.08■□□□□ 0.49
NEDD1-202ENST00000411739 DEPDC5O75140 1603 aa18.08■□□□□ 0.48
NEDD1-202ENST00000411739 NPATQ14207 1427 aa18.08■□□□□ 0.48
NEDD1-202ENST00000411739 PZPP20742 1482 aa18.07■□□□□ 0.48
NEDD1-202ENST00000411739 PREX1Q8TCU6 1659 aa18.07■□□□□ 0.48
NEDD1-202ENST00000411739 NAIPQ13075 1403 aa18.06■□□□□ 0.48
NEDD1-202ENST00000411739 TNRQ92752 1358 aa18.05■□□□□ 0.48
NEDD1-202ENST00000411739 CAMSAP1Q5T5Y3 1602 aa18.05■□□□□ 0.48
NEDD1-202ENST00000411739 FAM135AQ9P2D6 1515 aa18.05■□□□□ 0.48
NEDD1-202ENST00000411739 ZC3H13Q5T200 1668 aaKnown RBP18.04■□□□□ 0.48
NEDD1-202ENST00000411739 NUP155O75694 1391 aa18.04■□□□□ 0.48
NEDD1-202ENST00000411739 VWDEQ8N2E2 1590 aa18.03■□□□□ 0.48
NEDD1-202ENST00000411739 MYO3AQ8NEV4 1616 aa18.01■□□□□ 0.47
NEDD1-202ENST00000411739 TRIM52Q96A61 297 aa18■□□□□ 0.47
NEDD1-202ENST00000411739 HFM1A2PYH4 1435 aa18■□□□□ 0.47
NEDD1-202ENST00000411739 ERVK-7P63135 1459 aa18■□□□□ 0.47
NEDD1-202ENST00000411739 UNC13BO14795 1591 aa18■□□□□ 0.47
NEDD1-202ENST00000411739 LMTK2Q8IWU2 1503 aa17.99■□□□□ 0.47
NEDD1-202ENST00000411739 ARHGAP31Q2M1Z3 1444 aa17.98■□□□□ 0.47
NEDD1-202ENST00000411739 GCC2Q8IWJ2 1684 aa17.97■□□□□ 0.47
NEDD1-202ENST00000411739 CEP170BQ9Y4F5 1589 aaPredicted RBP17.97■□□□□ 0.47
NEDD1-202ENST00000411739 SPATA31D1Q6ZQQ2 1576 aa17.97■□□□□ 0.47
NEDD1-202ENST00000411739 NCKAP5LQ9HCH0 1330 aa17.96■□□□□ 0.47
NEDD1-202ENST00000411739 EFCAB6Q5THR3 1501 aa17.96■□□□□ 0.47
NEDD1-202ENST00000411739 A2ML1A8K2U0 1454 aa17.95■□□□□ 0.46
NEDD1-202ENST00000411739 IDI1Q13907 227 aa17.93■□□□□ 0.46
NEDD1-202ENST00000411739 IQGAP3Q86VI3 1631 aa17.93■□□□□ 0.46
NEDD1-202ENST00000411739 TET3O43151 1660 aa17.92■□□□□ 0.46
NEDD1-202ENST00000411739 STRCQ7RTU9 1775 aa17.92■□□□□ 0.46
NEDD1-202ENST00000411739 ZNF142P52746 1687 aaPredicted RBP17.92■□□□□ 0.46
NEDD1-202ENST00000411739 NLRP1Q9C000 1473 aa17.91■□□□□ 0.46
NEDD1-202ENST00000411739 E9PCH4 1651 aa17.9■□□□□ 0.46
NEDD1-202ENST00000411739 SYNMO15061 1565 aa17.9■□□□□ 0.46
NEDD1-202ENST00000411739 UGGT1Q9NYU2 1555 aa17.9■□□□□ 0.46
NEDD1-202ENST00000411739 NOS1P29475 1434 aa17.9■□□□□ 0.46
NEDD1-202ENST00000411739 THEMISQ8N1K5 641 aaPredicted RBP17.9■□□□□ 0.46
NEDD1-202ENST00000411739 STAG3Q9UJ98 1225 aa17.9■□□□□ 0.46
NEDD1-202ENST00000411739 SETD5Q9C0A6 1442 aa17.89■□□□□ 0.45
NEDD1-202ENST00000411739 FOXD1Q16676 465 aa17.89■□□□□ 0.45
NEDD1-202ENST00000411739 SLC4A1APQ9BWU0 796 aaKnown RBP17.89■□□□□ 0.45
NEDD1-202ENST00000411739 PKD2Q13563 968 aa17.88■□□□□ 0.45
NEDD1-202ENST00000411739 CHGAP10645 457 aaKnown RBP17.87■□□□□ 0.45
NEDD1-202ENST00000411739 RPRD2Q5VT52 1461 aaKnown RBP17.87■□□□□ 0.45
NEDD1-202ENST00000411739 RAB3GAP2Q9H2M9 1393 aa17.87■□□□□ 0.45
NEDD1-202ENST00000411739 SENP3Q9H4L4 574 aaPredicted RBP17.86■□□□□ 0.45
NEDD1-202ENST00000411739 PIK3C2BO00750 1634 aa17.86■□□□□ 0.45
NEDD1-202ENST00000411739 ANKLE2Q86XL3 938 aa17.84■□□□□ 0.45
NEDD1-202ENST00000411739 SLC52A1Q9NWF4 448 aa17.84■□□□□ 0.45
NEDD1-202ENST00000411739 UBR1Q8IWV7 1749 aa17.83■□□□□ 0.45
NEDD1-202ENST00000411739 DMRT2Q9Y5R5 561 aa17.83■□□□□ 0.44
NEDD1-202ENST00000411739 PLA2R1Q13018 1463 aa17.83■□□□□ 0.44
NEDD1-202ENST00000411739 LTKP29376 864 aa17.82■□□□□ 0.44
NEDD1-202ENST00000411739 MPHOSPH9Q99550 1183 aa17.82■□□□□ 0.44
NEDD1-202ENST00000411739 TXNDC2Q86VQ3 553 aa17.81■□□□□ 0.44
NEDD1-202ENST00000411739 NUTM2DQ5VT03 806 aaPredicted RBP17.8■□□□□ 0.44
NEDD1-202ENST00000411739 PTPRTO14522 1441 aa17.78■□□□□ 0.44
NEDD1-202ENST00000411739 TMEM2Q9UHN6 1383 aa17.77■□□□□ 0.44
NEDD1-202ENST00000411739 NEURL4Q96JN8 1562 aa17.77■□□□□ 0.43
NEDD1-202ENST00000411739 ADGRB3O60242 1522 aa17.76■□□□□ 0.43
NEDD1-202ENST00000411739 SPHKAPQ2M3C7 1700 aa17.76■□□□□ 0.43
NEDD1-202ENST00000411739 EID1Q9Y6B2 187 aa17.76■□□□□ 0.43
NEDD1-202ENST00000411739 MYO5BQ9ULV0 1848 aa17.75■□□□□ 0.43
NEDD1-202ENST00000411739 ZNF335Q9H4Z2 1342 aaPredicted RBP17.75■□□□□ 0.43
NEDD1-202ENST00000411739 NPHP4O75161 1426 aaPredicted RBP17.75■□□□□ 0.43
NEDD1-202ENST00000411739 POLR1AO95602 1720 aaPredicted RBP17.74■□□□□ 0.43
NEDD1-202ENST00000411739 ARHGAP23Q9P227 1491 aa17.74■□□□□ 0.43
NEDD1-202ENST00000411739 TMEM131LA2VDJ0 1609 aa17.73■□□□□ 0.43
NEDD1-202ENST00000411739 SLIT1O75093 1534 aa17.73■□□□□ 0.43
NEDD1-202ENST00000411739 SCAF11Q99590 1463 aaKnown RBP17.73■□□□□ 0.43
NEDD1-202ENST00000411739 ZNF326Q5BKZ1 582 aaKnown RBP17.73■□□□□ 0.43
NEDD1-202ENST00000411739 BCANQ96GW7 911 aa17.73■□□□□ 0.43
NEDD1-202ENST00000411739 CLTCL1P53675 1640 aa17.72■□□□□ 0.43
NEDD1-202ENST00000411739 TRIM26Q12899 539 aaPredicted RBP17.72■□□□□ 0.43
NEDD1-202ENST00000411739 RIMS2Q9UQ26 1411 aa17.71■□□□□ 0.43
NEDD1-202ENST00000411739 TRPM2O94759 1503 aa17.71■□□□□ 0.43
NEDD1-202ENST00000411739 PPP1R15AO75807 674 aaPredicted RBP17.71■□□□□ 0.42
NEDD1-202ENST00000411739 SLC26A8Q96RN1 970 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms