RNA–Protein interactions for RNA: ENST00000411549.5

ACAA1-203, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 1 (best)

Gene ACAA1, Length 1,944 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-203ENST00000411549 RRP7BPQ9NSQ0 103 aa28.76■■■□□ 2.19
ACAA1-203ENST00000411549 ATP10AO60312 1499 aa28.76■■■□□ 2.19
ACAA1-203ENST00000411549 REREQ9P2R6 1566 aa28.73■■■□□ 2.19
ACAA1-203ENST00000411549 KIF15Q9NS87 1388 aa28.72■■■□□ 2.19
ACAA1-203ENST00000411549 TONSLQ96HA7 1378 aa28.72■■■□□ 2.19
ACAA1-203ENST00000411549 DUOX2Q9NRD8 1548 aa28.71■■■□□ 2.19
ACAA1-203ENST00000411549 A2MP01023 1474 aa28.71■■■□□ 2.19
ACAA1-203ENST00000411549 DHX29Q7Z478 1369 aaKnown RBP28.67■■■□□ 2.18
ACAA1-203ENST00000411549 SIGLEC1Q9BZZ2 1709 aa28.65■■■□□ 2.18
ACAA1-203ENST00000411549 ERBINQ96RT1 1412 aa28.63■■■□□ 2.17
ACAA1-203ENST00000411549 EIF2AK4Q9P2K8 1649 aaKnown RBP28.62■■■□□ 2.17
ACAA1-203ENST00000411549 AGLP35573 1532 aa28.61■■■□□ 2.17
ACAA1-203ENST00000411549 ANKRD50Q9ULJ7 1429 aa28.61■■■□□ 2.17
ACAA1-203ENST00000411549 BCORL1Q5H9F3 1711 aa28.6■■■□□ 2.17
ACAA1-203ENST00000411549 TRIM52Q96A61 297 aa28.55■■■□□ 2.16
ACAA1-203ENST00000411549 ARID4BQ4LE39 1312 aaPredicted RBP28.54■■■□□ 2.16
ACAA1-203ENST00000411549 MPHOSPH9Q99550 1183 aa28.54■■■□□ 2.16
ACAA1-203ENST00000411549 KIF3BO15066 747 aa28.52■■■□□ 2.16
ACAA1-203ENST00000411549 RNF17Q9BXT8 1623 aaKnown RBP28.51■■■□□ 2.16
ACAA1-203ENST00000411549 DEPDC5O75140 1603 aa28.49■■■□□ 2.15
ACAA1-203ENST00000411549 DDX10Q13206 875 aaKnown RBP28.49■■■□□ 2.15
ACAA1-203ENST00000411549 UNC13BO14795 1591 aa28.45■■■□□ 2.14
ACAA1-203ENST00000411549 MROH1Q8NDA8 1641 aa28.45■■■□□ 2.14
ACAA1-203ENST00000411549 PRDM15P57071 1507 aaPredicted RBP28.44■■■□□ 2.14
ACAA1-203ENST00000411549 GGT6Q6P531 493 aa28.43■■■□□ 2.14
ACAA1-203ENST00000411549 MLECQ14165 292 aa28.42■■■□□ 2.14
ACAA1-203ENST00000411549 ANKRD30BQ9BXX2 1392 aa28.42■■■□□ 2.14
ACAA1-203ENST00000411549 HIRIP3Q9BW71 556 aaPredicted RBP28.41■■■□□ 2.14
ACAA1-203ENST00000411549 FER1L4A9Z1Z3 1794 aa28.37■■■□□ 2.13
ACAA1-203ENST00000411549 ADAMTSL3P82987 1691 aa28.37■■■□□ 2.13
ACAA1-203ENST00000411549 FAM135AQ9P2D6 1515 aa28.37■■■□□ 2.13
ACAA1-203ENST00000411549 RPRD2Q5VT52 1461 aaKnown RBP28.36■■■□□ 2.13
ACAA1-203ENST00000411549 PPP6R1Q9UPN7 881 aa28.36■■■□□ 2.13
ACAA1-203ENST00000411549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.35■■■□□ 2.135e-10■■□□□ 12.3
ACAA1-203ENST00000411549 ZC3H13Q5T200 1668 aaKnown RBP28.35■■■□□ 2.13
ACAA1-203ENST00000411549 VWDEQ8N2E2 1590 aa28.35■■■□□ 2.13
ACAA1-203ENST00000411549 PZPP20742 1482 aa28.35■■■□□ 2.13
ACAA1-203ENST00000411549 KANK1Q14678 1352 aa28.34■■■□□ 2.13
ACAA1-203ENST00000411549 KDM5DQ9BY66 1539 aa28.34■■■□□ 2.13
ACAA1-203ENST00000411549 CEP152O94986 1710 aa28.34■■■□□ 2.13
ACAA1-203ENST00000411549 FOXD1Q16676 465 aa28.33■■■□□ 2.13
ACAA1-203ENST00000411549 IQGAP3Q86VI3 1631 aa28.33■■■□□ 2.13
ACAA1-203ENST00000411549 MADDQ8WXG6 1647 aa28.32■■■□□ 2.12
ACAA1-203ENST00000411549 CLTCQ00610 1675 aaKnown RBP28.32■■■□□ 2.12
ACAA1-203ENST00000411549 NUP155O75694 1391 aa28.31■■■□□ 2.12
ACAA1-203ENST00000411549 ABCC3O15438 1527 aa28.3■■■□□ 2.12
ACAA1-203ENST00000411549 L3MBTL2Q969R5 705 aa28.3■■■□□ 2.12
ACAA1-203ENST00000411549 SLC4A1APQ9BWU0 796 aaKnown RBP28.3■■■□□ 2.12
ACAA1-203ENST00000411549 WASHC2CQ9Y4E1 1318 aa28.29■■■□□ 2.12
ACAA1-203ENST00000411549 ESF1Q9H501 851 aaKnown RBP28.28■■■□□ 2.12
ACAA1-203ENST00000411549 CNTLNQ9NXG0 1405 aa28.28■■■□□ 2.12
ACAA1-203ENST00000411549 MROH2AA6NES4 1674 aa28.27■■■□□ 2.12
ACAA1-203ENST00000411549 LMTK2Q8IWU2 1503 aa28.27■■■□□ 2.12
ACAA1-203ENST00000411549 RIMS1Q86UR5 1692 aaKnown RBP28.27■■■□□ 2.12
ACAA1-203ENST00000411549 CAMSAP1Q5T5Y3 1602 aa28.26■■■□□ 2.11
ACAA1-203ENST00000411549 CCER2I3L3R5 266 aa28.25■■■□□ 2.11
ACAA1-203ENST00000411549 TET3O43151 1660 aa28.25■■■□□ 2.11
ACAA1-203ENST00000411549 HSPA5P11021 654 aaKnown RBP28.22■■■□□ 2.11
ACAA1-203ENST00000411549 ANP32CO43423 234 aa28.21■■■□□ 2.11
ACAA1-203ENST00000411549 EFCAB6Q5THR3 1501 aa28.2■■■□□ 2.11
ACAA1-203ENST00000411549 PELP1Q8IZL8 1130 aaKnown RBP28.19■■■□□ 2.1
ACAA1-203ENST00000411549 KDM4FA0A1W2PPD8 638 aa28.18■■■□□ 2.1
ACAA1-203ENST00000411549 EIF4G2P78344 907 aaKnown RBP eCLIP28.18■■■□□ 2.1
ACAA1-203ENST00000411549 C3P01024 1663 aa28.17■■■□□ 2.1
ACAA1-203ENST00000411549 ZMYM3Q14202 1370 aa28.17■■■□□ 2.1
ACAA1-203ENST00000411549 E9PCH4 1651 aa28.16■■■□□ 2.1
ACAA1-203ENST00000411549 ARHGAP31Q2M1Z3 1444 aa28.15■■■□□ 2.1
ACAA1-203ENST00000411549 WASHC2AQ641Q2 1341 aa28.14■■■□□ 2.1
ACAA1-203ENST00000411549 NBPF8Q3BBV2 869 aa28.13■■■□□ 2.09
ACAA1-203ENST00000411549 NPATQ14207 1427 aa28.13■■■□□ 2.09
ACAA1-203ENST00000411549 PTPRMP28827 1452 aa28.12■■■□□ 2.09
ACAA1-203ENST00000411549 CFAP65Q6ZU64 1925 aaKnown RBP28.1■■■□□ 2.09
ACAA1-203ENST00000411549 PREX1Q8TCU6 1659 aa28.08■■■□□ 2.09
ACAA1-203ENST00000411549 PKD2Q13563 968 aa28.08■■■□□ 2.09
ACAA1-203ENST00000411549 CEBPAP49715 358 aaPredicted RBP28.06■■■□□ 2.08
ACAA1-203ENST00000411549 SPATA31E1Q6ZUB1 1445 aa28.05■■■□□ 2.08
ACAA1-203ENST00000411549 SPHKAPQ2M3C7 1700 aa28.03■■■□□ 2.08
ACAA1-203ENST00000411549 SPATA31D1Q6ZQQ2 1576 aa28.03■■■□□ 2.08
ACAA1-203ENST00000411549 ERVK-7P63135 1459 aa28.03■■■□□ 2.08
ACAA1-203ENST00000411549 PLPPR3Q6T4P5 718 aa28.02■■■□□ 2.08
ACAA1-203ENST00000411549 FBXO31Q5XUX0 539 aaPredicted RBP28■■■□□ 2.07
ACAA1-203ENST00000411549 NOS1P29475 1434 aa28■■■□□ 2.07
ACAA1-203ENST00000411549 CCDC7Q96M83 1385 aa27.99■■■□□ 2.07
ACAA1-203ENST00000411549 PTPRTO14522 1441 aa27.97■■■□□ 2.07
ACAA1-203ENST00000411549 C11orf95C9JLR9 678 aaPredicted RBP27.96■■■□□ 2.07
ACAA1-203ENST00000411549 SYNMO15061 1565 aa27.96■■■□□ 2.07
ACAA1-203ENST00000411549 SUPT16HQ9Y5B9 1047 aaKnown RBP27.95■■■□□ 2.06
ACAA1-203ENST00000411549 TRPM2O94759 1503 aa27.95■■■□□ 2.06
ACAA1-203ENST00000411549 SETD1BQ9UPS6 1966 aaKnown RBP27.95■■■□□ 2.06
ACAA1-203ENST00000411549 POLR1AO95602 1720 aaPredicted RBP27.94■■■□□ 2.06
ACAA1-203ENST00000411549 TNRQ92752 1358 aa27.94■■■□□ 2.06
ACAA1-203ENST00000411549 UHRF1BP1Q6BDS2 1440 aa27.92■■■□□ 2.06
ACAA1-203ENST00000411549 PLA2R1Q13018 1463 aa27.92■■■□□ 2.06
ACAA1-203ENST00000411549 MYO3AQ8NEV4 1616 aa27.9■■■□□ 2.06
ACAA1-203ENST00000411549 PIK3C2BO00750 1634 aa27.9■■■□□ 2.06
ACAA1-203ENST00000411549 UGGT1Q9NYU2 1555 aa27.87■■■□□ 2.05
ACAA1-203ENST00000411549 CLTCL1P53675 1640 aa27.87■■■□□ 2.05
ACAA1-203ENST00000411549 NLRP1Q9C000 1473 aa27.86■■■□□ 2.05
ACAA1-203ENST00000411549 KIF7Q2M1P5 1343 aa27.86■■■□□ 2.05
ACAA1-203ENST00000411549 SLC52A1Q9NWF4 448 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms