RNA–Protein interactions for RNA: ENST00000411501.5

GGA1-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 3

Gene GGA1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-207ENST00000411501 KDM5DQ9BY66 1539 aa29.07■■■□□ 2.24
GGA1-207ENST00000411501 PZPP20742 1482 aa29.06■■■□□ 2.24
GGA1-207ENST00000411501 CEP162Q5TB80 1403 aa29.06■■■□□ 2.24
GGA1-207ENST00000411501 TNRQ92752 1358 aa29.06■■■□□ 2.24
GGA1-207ENST00000411501 FBXO31Q5XUX0 539 aaPredicted RBP29.06■■■□□ 2.24
GGA1-207ENST00000411501 CPS1P31327 1500 aa29.05■■■□□ 2.24
GGA1-207ENST00000411501 MED1Q15648 1581 aaPredicted RBP29.04■■■□□ 2.24
GGA1-207ENST00000411501 FAM135AQ9P2D6 1515 aa29.04■■■□□ 2.24
GGA1-207ENST00000411501 CCDC141Q6ZP82 1450 aa29.03■■■□□ 2.24
GGA1-207ENST00000411501 SHANK2Q9UPX8 1470 aa29.03■■■□□ 2.24
GGA1-207ENST00000411501 KIF3BO15066 747 aa29.02■■■□□ 2.24
GGA1-207ENST00000411501 SCAF1Q9H7N4 1312 aaKnown RBP29.01■■■□□ 2.23
GGA1-207ENST00000411501 HSPA1LP34931 641 aa29.01■■■□□ 2.23
GGA1-207ENST00000411501 CAMSAP2Q08AD1 1489 aa29■■■□□ 2.23
GGA1-207ENST00000411501 PIP4K2BP78356 416 aa29■■■□□ 2.23
GGA1-207ENST00000411501 VWDEQ8N2E2 1590 aa29■■■□□ 2.23
GGA1-207ENST00000411501 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.98■■■□□ 2.23
GGA1-207ENST00000411501 UGGT1Q9NYU2 1555 aa28.95■■■□□ 2.22
GGA1-207ENST00000411501 WASHC2CQ9Y4E1 1318 aa28.94■■■□□ 2.22
GGA1-207ENST00000411501 DEPDC5O75140 1603 aa28.94■■■□□ 2.22
GGA1-207ENST00000411501 NCOA2Q15596 1464 aa28.94■■■□□ 2.22
GGA1-207ENST00000411501 NLRP1Q9C000 1473 aa28.94■■■□□ 2.22
GGA1-207ENST00000411501 TOM1O60784 492 aa28.94■■■□□ 2.22
GGA1-207ENST00000411501 ALKQ9UM73 1620 aa28.94■■■□□ 2.22
GGA1-207ENST00000411501 MIA2Q96PC5 1412 aa28.93■■■□□ 2.22
GGA1-207ENST00000411501 ANKLE2Q86XL3 938 aa28.92■■■□□ 2.22
GGA1-207ENST00000411501 MED14O60244 1454 aa28.91■■■□□ 2.22
GGA1-207ENST00000411501 IQGAP1P46940 1657 aa28.9■■■□□ 2.22
GGA1-207ENST00000411501 ARHGEF5Q12774 1597 aa28.9■■■□□ 2.22
GGA1-207ENST00000411501 NPHP4O75161 1426 aaPredicted RBP28.89■■■□□ 2.22
GGA1-207ENST00000411501 STRCP1A6NGW2 1772 aa28.88■■■□□ 2.21
GGA1-207ENST00000411501 THEMISQ8N1K5 641 aaPredicted RBP28.88■■■□□ 2.21
GGA1-207ENST00000411501 RNF17Q9BXT8 1623 aaKnown RBP28.87■■■□□ 2.21
GGA1-207ENST00000411501 RSPH4AQ5TD94 716 aa28.85■■■□□ 2.21
GGA1-207ENST00000411501 ZC3H13Q5T200 1668 aaKnown RBP28.84■■■□□ 2.21
GGA1-207ENST00000411501 ABCC3O15438 1527 aa28.83■■■□□ 2.21
GGA1-207ENST00000411501 SYNMO15061 1565 aa28.78■■■□□ 2.2
GGA1-207ENST00000411501 MAST1Q9Y2H9 1570 aa28.78■■■□□ 2.2
GGA1-207ENST00000411501 LRRC7Q96NW7 1537 aa28.78■■■□□ 2.2
GGA1-207ENST00000411501 MROH1Q8NDA8 1641 aa28.77■■■□□ 2.2
GGA1-207ENST00000411501 ERVK-7P63135 1459 aa28.77■■■□□ 2.2
GGA1-207ENST00000411501 EIF2AK4Q9P2K8 1649 aaKnown RBP28.76■■■□□ 2.2
GGA1-207ENST00000411501 TSPY4P0CV99 314 aa28.76■■■□□ 2.19
GGA1-207ENST00000411501 TSPY10P0CW01 314 aa28.76■■■□□ 2.19
GGA1-207ENST00000411501 CEP152O94986 1710 aa28.76■■■□□ 2.19
GGA1-207ENST00000411501 CFAP65Q6ZU64 1925 aaKnown RBP28.75■■■□□ 2.19
GGA1-207ENST00000411501 UBR1Q8IWV7 1749 aa28.74■■■□□ 2.19
GGA1-207ENST00000411501 PHF23Q9BUL5 403 aaPredicted RBP28.71■■■□□ 2.19
GGA1-207ENST00000411501 SENP3Q9H4L4 574 aaPredicted RBP28.69■■■□□ 2.18
GGA1-207ENST00000411501 LRRC9Q6ZRR7 1453 aa28.68■■■□□ 2.18
GGA1-207ENST00000411501 SCAF11Q99590 1463 aaKnown RBP28.66■■■□□ 2.18
GGA1-207ENST00000411501 XIRP1Q702N8 1843 aaKnown RBP28.65■■■□□ 2.18
GGA1-207ENST00000411501 ARHGAP23Q9P227 1491 aa28.61■■■□□ 2.17
GGA1-207ENST00000411501 SLIT1O75093 1534 aa28.6■■■□□ 2.17
GGA1-207ENST00000411501 DUOX2Q9NRD8 1548 aa28.59■■■□□ 2.17
GGA1-207ENST00000411501 PRDM15P57071 1507 aaPredicted RBP28.59■■■□□ 2.17
GGA1-207ENST00000411501 LTKP29376 864 aa28.58■■■□□ 2.17
GGA1-207ENST00000411501 VPS8Q8N3P4 1428 aa28.58■■■□□ 2.17
GGA1-207ENST00000411501 MYOM3Q5VTT5 1437 aa28.55■■■□□ 2.16
GGA1-207ENST00000411501 CROCC2H7BZ55 1655 aa28.54■■■□□ 2.16
GGA1-207ENST00000411501 PIK3C2BO00750 1634 aa28.54■■■□□ 2.16
GGA1-207ENST00000411501 ARHGAP31Q2M1Z3 1444 aa28.53■■■□□ 2.16
GGA1-207ENST00000411501 KANK4Q5T7N3 995 aaPredicted RBP28.53■■■□□ 2.16
GGA1-207ENST00000411501 TXNDC2Q86VQ3 553 aa28.52■■■□□ 2.16
GGA1-207ENST00000411501 RGS17Q9UGC6 210 aaPredicted RBP28.5■■■□□ 2.15
GGA1-207ENST00000411501 MAP3K1Q13233 1512 aa28.49■■■□□ 2.15
GGA1-207ENST00000411501 KIF15Q9NS87 1388 aa28.49■■■□□ 2.15
GGA1-207ENST00000411501 ERBINQ96RT1 1412 aa28.48■■■□□ 2.15
GGA1-207ENST00000411501 EID1Q9Y6B2 187 aa28.44■■■□□ 2.14
GGA1-207ENST00000411501 TMEM2Q9UHN6 1383 aa28.44■■■□□ 2.14
GGA1-207ENST00000411501 KDM5AP29375 1690 aaKnown RBP28.44■■■□□ 2.14
GGA1-207ENST00000411501 ABCC5O15440 1437 aa28.43■■■□□ 2.14
GGA1-207ENST00000411501 RRP7BPQ9NSQ0 103 aa28.41■■■□□ 2.14
GGA1-207ENST00000411501 FAM135BQ49AJ0 1406 aa28.41■■■□□ 2.14
GGA1-207ENST00000411501 PTPN23Q9H3S7 1636 aa28.4■■■□□ 2.14
GGA1-207ENST00000411501 EFCAB6Q5THR3 1501 aa28.4■■■□□ 2.14
GGA1-207ENST00000411501 ROBO1Q9Y6N7 1651 aa28.39■■■□□ 2.14
GGA1-207ENST00000411501 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.39■■■□□ 2.142e-8■■□□□ 11.8
GGA1-207ENST00000411501 TMEM94Q12767 1356 aa28.38■■■□□ 2.13
GGA1-207ENST00000411501 TET3O43151 1660 aa28.36■■■□□ 2.13
GGA1-207ENST00000411501 DAPK1P53355 1430 aa28.35■■■□□ 2.13
GGA1-207ENST00000411501 STAG3Q9UJ98 1225 aa28.35■■■□□ 2.13
GGA1-207ENST00000411501 LMTK2Q8IWU2 1503 aa28.34■■■□□ 2.13
GGA1-207ENST00000411501 LOC105371045A0A1W2PR82 267 aa28.33■■■□□ 2.13
GGA1-207ENST00000411501 KANK1Q14678 1352 aa28.33■■■□□ 2.13
GGA1-207ENST00000411501 IDI1Q13907 227 aa28.32■■■□□ 2.12
GGA1-207ENST00000411501 NWD1Q149M9 1564 aa28.32■■■□□ 2.12
GGA1-207ENST00000411501 ADGRB3O60242 1522 aa28.3■■■□□ 2.12
GGA1-207ENST00000411501 KCNA6P17658 529 aa28.3■■■□□ 2.12
GGA1-207ENST00000411501 POTEAQ6S8J7 498 aa28.3■■■□□ 2.12
GGA1-207ENST00000411501 RBM33Q96EV2 1170 aaKnown RBP28.3■■■□□ 2.12
GGA1-207ENST00000411501 SLC26A8Q96RN1 970 aa28.3■■■□□ 2.12
GGA1-207ENST00000411501 NKTRP30414 1462 aaKnown RBP28.27■■■□□ 2.12
GGA1-207ENST00000411501 NOS1P29475 1434 aa28.27■■■□□ 2.12
GGA1-207ENST00000411501 PROSER2Q86WR7 435 aaPredicted RBP28.26■■■□□ 2.11
GGA1-207ENST00000411501 FGD6Q6ZV73 1430 aa28.25■■■□□ 2.11
GGA1-207ENST00000411501 MYO5BQ9ULV0 1848 aa28.23■■■□□ 2.11
GGA1-207ENST00000411501 ANKRD30AQ9BXX3 1397 aa28.23■■■□□ 2.11
GGA1-207ENST00000411501 SETD1AO15047 1707 aaKnown RBP28.22■■■□□ 2.11
GGA1-207ENST00000411501 PHLPP1O60346 1717 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 180.2 ms