RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 LRP6O75581 1613 aa12.34□□□□□ -0.43
UBE2F-204ENST00000409953 JCADQ9P266 1359 aa12.34□□□□□ -0.43
UBE2F-204ENST00000409953 MEX3CQ5U5Q3 659 aaKnown RBP12.34□□□□□ -0.43
UBE2F-204ENST00000409953 ROBO1Q9Y6N7 1651 aa12.34□□□□□ -0.43
UBE2F-204ENST00000409953 DEPDC5O75140 1603 aa12.33□□□□□ -0.43
UBE2F-204ENST00000409953 ABCC1P33527 1531 aa12.33□□□□□ -0.44
UBE2F-204ENST00000409953 ARHGAP5Q13017 1502 aa12.33□□□□□ -0.44
UBE2F-204ENST00000409953 KIDINS220Q9ULH0 1771 aa12.32□□□□□ -0.44
UBE2F-204ENST00000409953 ITSN2Q9NZM3 1697 aa12.32□□□□□ -0.44
UBE2F-204ENST00000409953 EHMT2Q96KQ7 1210 aa12.31□□□□□ -0.44
UBE2F-204ENST00000409953 XIRP1Q702N8 1843 aaKnown RBP12.3□□□□□ -0.44
UBE2F-204ENST00000409953 RGS12O14924 1447 aa12.29□□□□□ -0.44
UBE2F-204ENST00000409953 TNRQ92752 1358 aa12.29□□□□□ -0.44
UBE2F-204ENST00000409953 NUTM2BA6NNL0 878 aaPredicted RBP12.28□□□□□ -0.44
UBE2F-204ENST00000409953 NUTM2EB1AL46 878 aaPredicted RBP12.28□□□□□ -0.44
UBE2F-204ENST00000409953 NUTM2DQ5VT03 806 aaPredicted RBP12.28□□□□□ -0.44
UBE2F-204ENST00000409953 NUTM2AQ8IVF1 878 aaPredicted RBP12.28□□□□□ -0.44
UBE2F-204ENST00000409953 PHLPP1O60346 1717 aa12.28□□□□□ -0.44
UBE2F-204ENST00000409953 THEMISQ8N1K5 641 aaPredicted RBP12.27□□□□□ -0.45
UBE2F-204ENST00000409953 SPATA31A6Q5VVP1 1343 aa12.26□□□□□ -0.45
UBE2F-204ENST00000409953 LRP5O75197 1615 aa12.26□□□□□ -0.45
UBE2F-204ENST00000409953 GGT6Q6P531 493 aa12.25□□□□□ -0.45
UBE2F-204ENST00000409953 FAM135AQ9P2D6 1515 aa12.25□□□□□ -0.45
UBE2F-204ENST00000409953 KIF14Q15058 1648 aa12.24□□□□□ -0.45
UBE2F-204ENST00000409953 ATAD2Q6PL18 1390 aa12.24□□□□□ -0.45
UBE2F-204ENST00000409953 LRRC9Q6ZRR7 1453 aa12.24□□□□□ -0.45
UBE2F-204ENST00000409953 KDM5DQ9BY66 1539 aa12.24□□□□□ -0.45
UBE2F-204ENST00000409953 UGGT1Q9NYU2 1555 aa12.24□□□□□ -0.45
UBE2F-204ENST00000409953 PRXQ9BXM0 1461 aa12.23□□□□□ -0.45
UBE2F-204ENST00000409953 CSRNP3Q8WYN3 585 aa12.23□□□□□ -0.45
UBE2F-204ENST00000409953 FBXO31Q5XUX0 539 aaPredicted RBP12.22□□□□□ -0.45
UBE2F-204ENST00000409953 ZC3H13Q5T200 1668 aaKnown RBP12.22□□□□□ -0.45
UBE2F-204ENST00000409953 COL16A1Q07092 1604 aaPredicted RBP12.22□□□□□ -0.45
UBE2F-204ENST00000409953 PLXNC1O60486 1568 aa12.22□□□□□ -0.45
UBE2F-204ENST00000409953 YY1P25490 414 aa12.21□□□□□ -0.45
UBE2F-204ENST00000409953 FGD6Q6ZV73 1430 aa12.2□□□□□ -0.46
UBE2F-204ENST00000409953 TMEM94Q12767 1356 aa12.19□□□□□ -0.46
UBE2F-204ENST00000409953 AFF2P51816 1311 aa12.19□□□□□ -0.46
UBE2F-204ENST00000409953 ATP7AQ04656 1500 aa12.19□□□□□ -0.46
UBE2F-204ENST00000409953 NLRP1Q9C000 1473 aa12.19□□□□□ -0.46
UBE2F-204ENST00000409953 SAMD9LQ8IVG5 1584 aa12.18□□□□□ -0.46
UBE2F-204ENST00000409953 A2MP01023 1474 aa12.18□□□□□ -0.46
UBE2F-204ENST00000409953 CDC42BPBQ9Y5S2 1711 aa12.17□□□□□ -0.46
UBE2F-204ENST00000409953 RBM6P78332 1123 aaKnown RBP12.17□□□□□ -0.46
UBE2F-204ENST00000409953 MAP3K1Q13233 1512 aa12.16□□□□□ -0.46
UBE2F-204ENST00000409953 PZPP20742 1482 aa12.16□□□□□ -0.46
UBE2F-204ENST00000409953 ZBTB22O15209 634 aa12.16□□□□□ -0.46
UBE2F-204ENST00000409953 RANGAP1P46060 587 aaPredicted RBP12.16□□□□□ -0.46
UBE2F-204ENST00000409953 MIA2Q96PC5 1412 aa12.15□□□□□ -0.46
UBE2F-204ENST00000409953 SHPRHQ149N8 1683 aa12.15□□□□□ -0.46
UBE2F-204ENST00000409953 SPAG9O60271 1321 aaKnown RBP12.14□□□□□ -0.47
UBE2F-204ENST00000409953 FOXD4L1Q9NU39 408 aa12.14□□□□□ -0.47
UBE2F-204ENST00000409953 PREX2Q70Z35 1606 aa12.14□□□□□ -0.47
UBE2F-204ENST00000409953 SENP3-EIF4A1A0A087X0R7 540 aa12.13□□□□□ -0.47
UBE2F-204ENST00000409953 SLC4A2P04920 1241 aa12.13□□□□□ -0.47
UBE2F-204ENST00000409953 QTRT2Q9H974 415 aaKnown RBP12.13□□□□□ -0.47
UBE2F-204ENST00000409953 SLAIN2Q9P270 581 aa12.12□□□□□ -0.47
UBE2F-204ENST00000409953 TROQ12816 1431 aaPredicted RBP12.11□□□□□ -0.47
UBE2F-204ENST00000409953 SCAF11Q99590 1463 aaKnown RBP12.11□□□□□ -0.47
UBE2F-204ENST00000409953 POTEDQ86YR6 584 aa12.11□□□□□ -0.47
UBE2F-204ENST00000409953 CDK11AQ9UQ88 783 aaPredicted RBP12.11□□□□□ -0.47
UBE2F-204ENST00000409953 EP400Q96L91 3159 aa12.11□□□□□ -0.47
UBE2F-204ENST00000409953 NHSL1Q5SYE7 1610 aa12.11□□□□□ -0.47
UBE2F-204ENST00000409953 CLIP1P30622 1438 aa12.11□□□□□ -0.47
UBE2F-204ENST00000409953 CCDC125Q86Z20 511 aa12.1□□□□□ -0.47
UBE2F-204ENST00000409953 TIAM1Q13009 1591 aa12.09□□□□□ -0.47
UBE2F-204ENST00000409953 NWD1Q149M9 1564 aa12.09□□□□□ -0.47
UBE2F-204ENST00000409953 INO80Q9ULG1 1556 aaPredicted RBP12.09□□□□□ -0.47
UBE2F-204ENST00000409953 MSH6P52701 1360 aa12.09□□□□□ -0.47
UBE2F-204ENST00000409953 DCAF8L1A6NGE4 600 aa12.09□□□□□ -0.47
UBE2F-204ENST00000409953 NGLY1Q96IV0 654 aa12.09□□□□□ -0.47
UBE2F-204ENST00000409953 SYCP2Q9BX26 1530 aa12.08□□□□□ -0.48
UBE2F-204ENST00000409953 PROSER2Q86WR7 435 aaPredicted RBP12.08□□□□□ -0.48
UBE2F-204ENST00000409953 ATP1B4Q9UN42 357 aaPredicted RBP12.07□□□□□ -0.48
UBE2F-204ENST00000409953 C8orf37Q96NL8 207 aa12.06□□□□□ -0.48
UBE2F-204ENST00000409953 AHDC1Q5TGY3 1603 aaPredicted RBP12.06□□□□□ -0.48
UBE2F-204ENST00000409953 PRDM15P57071 1507 aaPredicted RBP12.06□□□□□ -0.48
UBE2F-204ENST00000409953 ADGBQ8N7X0 1667 aa12.04□□□□□ -0.48
UBE2F-204ENST00000409953 LTKP29376 864 aa12.04□□□□□ -0.48
UBE2F-204ENST00000409953 ABCC3O15438 1527 aa12.03□□□□□ -0.48
UBE2F-204ENST00000409953 KCNA6P17658 529 aa12.03□□□□□ -0.48
UBE2F-204ENST00000409953 HRCP23327 699 aa12.03□□□□□ -0.48
UBE2F-204ENST00000409953 TXNDC2Q86VQ3 553 aa12.03□□□□□ -0.48
UBE2F-204ENST00000409953 ZNF777Q9ULD5 760 aaPredicted RBP12.03□□□□□ -0.48
UBE2F-204ENST00000409953 DIP2AQ14689 1571 aa12.03□□□□□ -0.48
UBE2F-204ENST00000409953 PSDA5PKW4 1024 aaPredicted RBP12.02□□□□□ -0.49
UBE2F-204ENST00000409953 HNRNPMP52272 730 aaKnown RBP eCLIP12.02□□□□□ -0.492e-6■■■□□ 16.1
UBE2F-204ENST00000409953 NKTRP30414 1462 aaKnown RBP12.02□□□□□ -0.49
UBE2F-204ENST00000409953 NCOA2Q15596 1464 aa12.02□□□□□ -0.49
UBE2F-204ENST00000409953 UBR1Q8IWV7 1749 aa12.01□□□□□ -0.49
UBE2F-204ENST00000409953 DEFB132Q7Z7B7 95 aa12.01□□□□□ -0.49
UBE2F-204ENST00000409953 WASHC2CQ9Y4E1 1318 aa12.01□□□□□ -0.49
UBE2F-204ENST00000409953 ARHGAP23Q9P227 1491 aa12.01□□□□□ -0.49
UBE2F-204ENST00000409953 KDM5AP29375 1690 aaKnown RBP12□□□□□ -0.49
UBE2F-204ENST00000409953 BLMP54132 1417 aaPredicted RBP12□□□□□ -0.49
UBE2F-204ENST00000409953 BCL9LQ86UU0 1499 aa12□□□□□ -0.49
UBE2F-204ENST00000409953 SLIT1O75093 1534 aa12□□□□□ -0.49
UBE2F-204ENST00000409953 CDC42BPAQ5VT25 1732 aa12□□□□□ -0.49
UBE2F-204ENST00000409953 KIF3BO15066 747 aa11.97□□□□□ -0.49
UBE2F-204ENST00000409953 EID1Q9Y6B2 187 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms