RNA–Protein interactions for RNA: ENST00000409700.4

PCDHAC1-202, Transcript of protocadherin alpha subfamily C, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHAC1, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC1-202ENST00000409700 BECN1Q14457 450 aa14.06□□□□□ -0.16
PCDHAC1-202ENST00000409700 C9orf84Q5VXU9 1444 aa14.06□□□□□ -0.16
PCDHAC1-202ENST00000409700 MS4A1P11836 297 aa14.05□□□□□ -0.16
PCDHAC1-202ENST00000409700 TCOF1Q13428 1488 aaKnown RBP14.05□□□□□ -0.16
PCDHAC1-202ENST00000409700 KIAA0586Q9BVV6 1533 aa14.04□□□□□ -0.16
PCDHAC1-202ENST00000409700 PTPRGP23470 1445 aa14.04□□□□□ -0.16
PCDHAC1-202ENST00000409700 EFCAB2Q5VUJ9 269 aa14.04□□□□□ -0.16
PCDHAC1-202ENST00000409700 CAMSAP2Q08AD1 1489 aa14.04□□□□□ -0.16
PCDHAC1-202ENST00000409700 ADAMTS8Q9UP79 889 aa14.04□□□□□ -0.16
PCDHAC1-202ENST00000409700 PLB1Q6P1J6 1458 aa14.02□□□□□ -0.16
PCDHAC1-202ENST00000409700 CFAP53Q96M91 514 aa14.02□□□□□ -0.17
PCDHAC1-202ENST00000409700 MRC2Q9UBG0 1479 aa14.02□□□□□ -0.17
PCDHAC1-202ENST00000409700 CENPQQ7L2Z9 268 aaPredicted RBP14.01□□□□□ -0.17
PCDHAC1-202ENST00000409700 MAGI3Q5TCQ9 1506 aa14□□□□□ -0.17
PCDHAC1-202ENST00000409700 APAF1O14727 1248 aa14□□□□□ -0.17
PCDHAC1-202ENST00000409700 MORC1Q86VD1 984 aa14□□□□□ -0.17
PCDHAC1-202ENST00000409700 HSP90AA1P07900 732 aaKnown RBP14□□□□□ -0.17
PCDHAC1-202ENST00000409700 USP35Q9P2H5 1018 aa14□□□□□ -0.17
PCDHAC1-202ENST00000409700 FTSJ3Q8IY81 847 aaKnown RBP14□□□□□ -0.17
PCDHAC1-202ENST00000409700 BACH2Q9BYV9 841 aa13.99□□□□□ -0.17
PCDHAC1-202ENST00000409700 IFT140Q96RY7 1462 aa13.99□□□□□ -0.17
PCDHAC1-202ENST00000409700 SKAP1Q86WV1 359 aa13.99□□□□□ -0.17
PCDHAC1-202ENST00000409700 FAM161AQ3B820 660 aa13.98□□□□□ -0.17
PCDHAC1-202ENST00000409700 ZNF608Q9ULD9 1512 aaPredicted RBP13.98□□□□□ -0.17
PCDHAC1-202ENST00000409700 KIF3BO15066 747 aa13.98□□□□□ -0.17
PCDHAC1-202ENST00000409700 SAMD9Q5K651 1589 aa13.98□□□□□ -0.17
PCDHAC1-202ENST00000409700 KANK1Q14678 1352 aa13.98□□□□□ -0.17
PCDHAC1-202ENST00000409700 SLC24A1O60721 1099 aa13.97□□□□□ -0.17
PCDHAC1-202ENST00000409700 SPAG9O60271 1321 aaKnown RBP13.97□□□□□ -0.17
PCDHAC1-202ENST00000409700 DHX29Q7Z478 1369 aaKnown RBP13.97□□□□□ -0.17
PCDHAC1-202ENST00000409700 SLKQ9H2G2 1235 aaPredicted RBP13.96□□□□□ -0.17
PCDHAC1-202ENST00000409700 NUP153P49790 1475 aaKnown RBP13.95□□□□□ -0.18
PCDHAC1-202ENST00000409700 KDM6BO15054 1643 aa13.95□□□□□ -0.18
PCDHAC1-202ENST00000409700 U2SURPO15042 1029 aaKnown RBP13.95□□□□□ -0.18
PCDHAC1-202ENST00000409700 CLUAP1Q96AJ1 413 aa13.95□□□□□ -0.18
PCDHAC1-202ENST00000409700 ARHGEF11O15085 1522 aa13.95□□□□□ -0.18
PCDHAC1-202ENST00000409700 GPATCH8Q9UKJ3 1502 aaKnown RBP13.95□□□□□ -0.18
PCDHAC1-202ENST00000409700 TEX14Q8IWB6 1497 aa13.95□□□□□ -0.18
PCDHAC1-202ENST00000409700 RRP7AQ9Y3A4 280 aaKnown RBP13.95□□□□□ -0.18
PCDHAC1-202ENST00000409700 WASHC2CQ9Y4E1 1318 aa13.94□□□□□ -0.18
PCDHAC1-202ENST00000409700 STAG3Q9UJ98 1225 aa13.94□□□□□ -0.18
PCDHAC1-202ENST00000409700 CENPJQ9HC77 1338 aaPredicted RBP13.94□□□□□ -0.18
PCDHAC1-202ENST00000409700 PPP2R1AP30153 589 aa13.94□□□□□ -0.18
PCDHAC1-202ENST00000409700 SAFB2Q14151 953 aaKnown RBP eCLIP13.94□□□□□ -0.18
PCDHAC1-202ENST00000409700 SPRYD3Q8NCJ5 442 aa13.94□□□□□ -0.18
PCDHAC1-202ENST00000409700 EIF3AQ14152 1382 aaKnown RBP13.93□□□□□ -0.18
PCDHAC1-202ENST00000409700 WDR62O43379 1518 aa13.93□□□□□ -0.18
PCDHAC1-202ENST00000409700 COG6Q9Y2V7 657 aa13.92□□□□□ -0.18
PCDHAC1-202ENST00000409700 GRIN2AQ12879 1464 aa13.92□□□□□ -0.18
PCDHAC1-202ENST00000409700 BCL2L13Q9BXK5 485 aa13.92□□□□□ -0.18
PCDHAC1-202ENST00000409700 U2AF1L5P0DN76 240 aaPredicted RBP13.91□□□□□ -0.18
PCDHAC1-202ENST00000409700 U2AF1Q01081 240 aaKnown RBP eCLIP13.91□□□□□ -0.18
PCDHAC1-202ENST00000409700 GSE1Q14687 1217 aa13.91□□□□□ -0.18
PCDHAC1-202ENST00000409700 C20orf194Q5TEA3 1177 aa13.91□□□□□ -0.18
PCDHAC1-202ENST00000409700 SPATA31E1Q6ZUB1 1445 aa13.91□□□□□ -0.18
PCDHAC1-202ENST00000409700 E9PSI1 815 aa13.91□□□□□ -0.18
PCDHAC1-202ENST00000409700 GGT6Q6P531 493 aa13.91□□□□□ -0.18
PCDHAC1-202ENST00000409700 ABCA5Q8WWZ7 1642 aa13.91□□□□□ -0.18
PCDHAC1-202ENST00000409700 PZPP20742 1482 aa13.91□□□□□ -0.18
PCDHAC1-202ENST00000409700 MAPK8IP3Q9UPT6 1336 aa13.91□□□□□ -0.18
PCDHAC1-202ENST00000409700 TRAK1Q9UPV9 953 aa13.9□□□□□ -0.18
PCDHAC1-202ENST00000409700 SYNJ2O15056 1496 aa13.9□□□□□ -0.18
PCDHAC1-202ENST00000409700 MAGI1Q96QZ7 1491 aaPredicted RBP13.9□□□□□ -0.18
PCDHAC1-202ENST00000409700 ERBINQ96RT1 1412 aa13.89□□□□□ -0.19
PCDHAC1-202ENST00000409700 GCC2Q8IWJ2 1684 aa13.89□□□□□ -0.19
PCDHAC1-202ENST00000409700 NFKBIBQ15653 356 aa13.89□□□□□ -0.19
PCDHAC1-202ENST00000409700 ARHGAP5Q13017 1502 aa13.88□□□□□ -0.19
PCDHAC1-202ENST00000409700 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.88□□□□□ -0.19
PCDHAC1-202ENST00000409700 RAPGEF6Q8TEU7 1601 aa13.88□□□□□ -0.19
PCDHAC1-202ENST00000409700 RALGAPBQ86X10 1494 aa13.87□□□□□ -0.19
PCDHAC1-202ENST00000409700 IL27Q8NEV9 243 aa13.87□□□□□ -0.19
PCDHAC1-202ENST00000409700 DNMT1P26358 1616 aaKnown RBP13.87□□□□□ -0.19
PCDHAC1-202ENST00000409700 AFAP1Q8N556 730 aa13.87□□□□□ -0.19
PCDHAC1-202ENST00000409700 CGNL1Q0VF96 1302 aa13.86□□□□□ -0.19
PCDHAC1-202ENST00000409700 BCAR3O75815 825 aa13.86□□□□□ -0.19
PCDHAC1-202ENST00000409700 RWDD1Q9H446 243 aaPredicted RBP13.86□□□□□ -0.19
PCDHAC1-202ENST00000409700 NUTM2DQ5VT03 806 aaPredicted RBP13.86□□□□□ -0.19
PCDHAC1-202ENST00000409700 PMFBP1Q8TBY8 1022 aa13.86□□□□□ -0.19
PCDHAC1-202ENST00000409700 SRPK2P78362 688 aaKnown RBP13.85□□□□□ -0.19
PCDHAC1-202ENST00000409700 PANK1Q8TE04 598 aa13.85□□□□□ -0.19
PCDHAC1-202ENST00000409700 STK26Q9P289 416 aa13.85□□□□□ -0.19
PCDHAC1-202ENST00000409700 CFAP70Q5T0N1 1121 aa13.85□□□□□ -0.19
PCDHAC1-202ENST00000409700 RNF123Q5XPI4 1314 aa13.85□□□□□ -0.19
PCDHAC1-202ENST00000409700 DISP3Q9P2K9 1392 aa13.84□□□□□ -0.19
PCDHAC1-202ENST00000409700 ADAMTS12P58397 1594 aa13.84□□□□□ -0.19
PCDHAC1-202ENST00000409700 DENND4BO75064 1496 aaPredicted RBP13.84□□□□□ -0.19
PCDHAC1-202ENST00000409700 CCDC141Q6ZP82 1450 aa13.84□□□□□ -0.19
PCDHAC1-202ENST00000409700 MYH16Q9H6N6 1097 aa13.84□□□□□ -0.19
PCDHAC1-202ENST00000409700 POGKQ9P215 609 aa13.84□□□□□ -0.19
PCDHAC1-202ENST00000409700 KIAA0556O60303 1618 aa13.83□□□□□ -0.2
PCDHAC1-202ENST00000409700 PLEKHG5O94827 1062 aa13.83□□□□□ -0.2
PCDHAC1-202ENST00000409700 KDM5BQ9UGL1 1544 aa13.82□□□□□ -0.2
PCDHAC1-202ENST00000409700 ITPRIPQ8IWB1 547 aa13.82□□□□□ -0.2
PCDHAC1-202ENST00000409700 GZF1Q9H116 711 aaPredicted RBP13.82□□□□□ -0.2
PCDHAC1-202ENST00000409700 DISP1Q96F81 1524 aa13.82□□□□□ -0.2
PCDHAC1-202ENST00000409700 KIF14Q15058 1648 aa13.81□□□□□ -0.2
PCDHAC1-202ENST00000409700 SMC4Q9NTJ3 1288 aa13.81□□□□□ -0.2
PCDHAC1-202ENST00000409700 KIF21AQ7Z4S6 1674 aa13.81□□□□□ -0.2
PCDHAC1-202ENST00000409700 MFAP1P55081 439 aaKnown RBP13.81□□□□□ -0.2
PCDHAC1-202ENST00000409700 ANP32BQ92688 251 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms