RNA–Protein interactions for RNA: ENST00000409460.5

VWA3B-201, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 4,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-201ENST00000409460 IQSEC2Q5JU85 1478 aa13.24□□□□□ -0.29
VWA3B-201ENST00000409460 MIA2Q96PC5 1412 aa13.24□□□□□ -0.29
VWA3B-201ENST00000409460 CAMSAP2Q08AD1 1489 aa13.24□□□□□ -0.29
VWA3B-201ENST00000409460 ANKRD30AQ9BXX3 1397 aa13.24□□□□□ -0.29
VWA3B-201ENST00000409460 PIP4K2BP78356 416 aa13.23□□□□□ -0.29
VWA3B-201ENST00000409460 A2ML1A8K2U0 1454 aa13.23□□□□□ -0.29
VWA3B-201ENST00000409460 PLA2R1Q13018 1463 aa13.23□□□□□ -0.29
VWA3B-201ENST00000409460 CDC42BPAQ5VT25 1732 aa13.22□□□□□ -0.29
VWA3B-201ENST00000409460 ADGBQ8N7X0 1667 aa13.22□□□□□ -0.29
VWA3B-201ENST00000409460 LOC105371045A0A1W2PR82 267 aa13.21□□□□□ -0.29
VWA3B-201ENST00000409460 CAMSAP1Q5T5Y3 1602 aa13.21□□□□□ -0.3
VWA3B-201ENST00000409460 NLRP1Q9C000 1473 aa13.2□□□□□ -0.3
VWA3B-201ENST00000409460 PTPRKQ15262 1439 aa13.2□□□□□ -0.3
VWA3B-201ENST00000409460 KDM5DQ9BY66 1539 aa13.19□□□□□ -0.3
VWA3B-201ENST00000409460 MROH2AA6NES4 1674 aa13.19□□□□□ -0.3
VWA3B-201ENST00000409460 LRRC9Q6ZRR7 1453 aa13.19□□□□□ -0.3
VWA3B-201ENST00000409460 KIDINS220Q9ULH0 1771 aa13.19□□□□□ -0.3
VWA3B-201ENST00000409460 RRP7BPQ9NSQ0 103 aa13.19□□□□□ -0.3
VWA3B-201ENST00000409460 C14orf37Q86TY3 774 aa13.18□□□□□ -0.3
VWA3B-201ENST00000409460 TIAM1Q13009 1591 aa13.18□□□□□ -0.3
VWA3B-201ENST00000409460 TXNDC2Q86VQ3 553 aa13.18□□□□□ -0.3
VWA3B-201ENST00000409460 CHGAP10645 457 aaKnown RBP13.18□□□□□ -0.3
VWA3B-201ENST00000409460 KIF15Q9NS87 1388 aa13.17□□□□□ -0.3
VWA3B-201ENST00000409460 ZNF335Q9H4Z2 1342 aaPredicted RBP13.17□□□□□ -0.3
VWA3B-201ENST00000409460 FBXO31Q5XUX0 539 aaPredicted RBP13.16□□□□□ -0.3
VWA3B-201ENST00000409460 C3P01024 1663 aa13.16□□□□□ -0.3
VWA3B-201ENST00000409460 INO80Q9ULG1 1556 aaPredicted RBP13.16□□□□□ -0.3
VWA3B-201ENST00000409460 CEP170BQ9Y4F5 1589 aaPredicted RBP13.16□□□□□ -0.3
VWA3B-201ENST00000409460 CHIC2Q9UKJ5 165 aa13.16□□□□□ -0.3
VWA3B-201ENST00000409460 PZPP20742 1482 aa13.16□□□□□ -0.3
VWA3B-201ENST00000409460 MAP3K1Q13233 1512 aa13.15□□□□□ -0.3
VWA3B-201ENST00000409460 NPHP4O75161 1426 aaPredicted RBP13.14□□□□□ -0.31
VWA3B-201ENST00000409460 ARHGEF5Q12774 1597 aa13.14□□□□□ -0.31
VWA3B-201ENST00000409460 CLTCQ00610 1675 aaKnown RBP13.14□□□□□ -0.31
VWA3B-201ENST00000409460 MBD5Q9P267 1494 aa13.14□□□□□ -0.31
VWA3B-201ENST00000409460 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.14□□□□□ -0.31
VWA3B-201ENST00000409460 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.13□□□□□ -0.31
VWA3B-201ENST00000409460 CPS1P31327 1500 aa13.13□□□□□ -0.31
VWA3B-201ENST00000409460 DUOX2Q9NRD8 1548 aa13.13□□□□□ -0.31
VWA3B-201ENST00000409460 PRKCSHP14314 528 aaPredicted RBP13.12□□□□□ -0.31
VWA3B-201ENST00000409460 SLC52A1Q9NWF4 448 aa13.11□□□□□ -0.31
VWA3B-201ENST00000409460 UGGT1Q9NYU2 1555 aa13.11□□□□□ -0.31
VWA3B-201ENST00000409460 PROSER2Q86WR7 435 aaPredicted RBP13.1□□□□□ -0.31
VWA3B-201ENST00000409460 SENP3Q9H4L4 574 aaPredicted RBP13.1□□□□□ -0.31
VWA3B-201ENST00000409460 ERBINQ96RT1 1412 aa13.09□□□□□ -0.31
VWA3B-201ENST00000409460 PLXNC1O60486 1568 aa13.09□□□□□ -0.31
VWA3B-201ENST00000409460 KANK4Q5T7N3 995 aaPredicted RBP13.08□□□□□ -0.32
VWA3B-201ENST00000409460 SOCS7O14512 581 aa13.08□□□□□ -0.32
VWA3B-201ENST00000409460 LRRIQ1Q96JM4 1722 aa13.08□□□□□ -0.32
VWA3B-201ENST00000409460 ITGAEP38570 1179 aa13.08□□□□□ -0.32
VWA3B-201ENST00000409460 MYO3AQ8NEV4 1616 aa13.07□□□□□ -0.32
VWA3B-201ENST00000409460 SHANK2Q9UPX8 1470 aa13.07□□□□□ -0.32
VWA3B-201ENST00000409460 PCGF6Q9BYE7 350 aa13.06□□□□□ -0.32
VWA3B-201ENST00000409460 TCOF1Q13428 1488 aaKnown RBP13.06□□□□□ -0.32
VWA3B-201ENST00000409460 FGD6Q6ZV73 1430 aa13.06□□□□□ -0.32
VWA3B-201ENST00000409460 SCAF11Q99590 1463 aaKnown RBP13.03□□□□□ -0.32
VWA3B-201ENST00000409460 ZNF326Q5BKZ1 582 aaKnown RBP13.03□□□□□ -0.32
VWA3B-201ENST00000409460 MAST1Q9Y2H9 1570 aa13.03□□□□□ -0.32
VWA3B-201ENST00000409460 ERVK-7P63135 1459 aa13.03□□□□□ -0.32
VWA3B-201ENST00000409460 SPATA31D1Q6ZQQ2 1576 aa13.03□□□□□ -0.32
VWA3B-201ENST00000409460 DAPK1P53355 1430 aa13.03□□□□□ -0.32
VWA3B-201ENST00000409460 MEX3CQ5U5Q3 659 aaKnown RBP13.02□□□□□ -0.32
VWA3B-201ENST00000409460 MSH6P52701 1360 aa13.02□□□□□ -0.32
VWA3B-201ENST00000409460 SIGLEC1Q9BZZ2 1709 aa13.02□□□□□ -0.32
VWA3B-201ENST00000409460 ZC3H13Q5T200 1668 aaKnown RBP13.02□□□□□ -0.33
VWA3B-201ENST00000409460 EIF2AK4Q9P2K8 1649 aaKnown RBP13.02□□□□□ -0.33
VWA3B-201ENST00000409460 ZNF142P52746 1687 aaPredicted RBP13.02□□□□□ -0.33
VWA3B-201ENST00000409460 ATF3P18847 181 aa13.01□□□□□ -0.33
VWA3B-201ENST00000409460 HSPA1LP34931 641 aa13.01□□□□□ -0.33
VWA3B-201ENST00000409460 BCL11AQ9H165 835 aa13.01□□□□□ -0.33
VWA3B-201ENST00000409460 ABCC3O15438 1527 aa13.01□□□□□ -0.33
VWA3B-201ENST00000409460 ARHGAP31Q2M1Z3 1444 aa13□□□□□ -0.33
VWA3B-201ENST00000409460 ACIN1Q9UKV3 1341 aaKnown RBP13□□□□□ -0.33
VWA3B-201ENST00000409460 KCNA6P17658 529 aa13□□□□□ -0.33
VWA3B-201ENST00000409460 TRIM52Q96A61 297 aa13□□□□□ -0.33
VWA3B-201ENST00000409460 ABCC5O15440 1437 aa12.99□□□□□ -0.33
VWA3B-201ENST00000409460 ANKRD50Q9ULJ7 1429 aa12.99□□□□□ -0.33
VWA3B-201ENST00000409460 DNMT1P26358 1616 aaKnown RBP12.99□□□□□ -0.33
VWA3B-201ENST00000409460 PTPN23Q9H3S7 1636 aa12.99□□□□□ -0.33
VWA3B-201ENST00000409460 STRCQ7RTU9 1775 aa12.98□□□□□ -0.33
VWA3B-201ENST00000409460 FOXD1Q16676 465 aa12.98□□□□□ -0.33
VWA3B-201ENST00000409460 TMEM2Q9UHN6 1383 aa12.98□□□□□ -0.33
VWA3B-201ENST00000409460 LTBP4Q8N2S1 1624 aa12.97□□□□□ -0.33
VWA3B-201ENST00000409460 IDI1Q13907 227 aa12.96□□□□□ -0.34
VWA3B-201ENST00000409460 SLC26A8Q96RN1 970 aa12.95□□□□□ -0.34
VWA3B-201ENST00000409460 NUP155O75694 1391 aa12.95□□□□□ -0.34
VWA3B-201ENST00000409460 CADPS2Q86UW7 1296 aa12.94□□□□□ -0.34
VWA3B-201ENST00000409460 MED14O60244 1454 aa12.94□□□□□ -0.34
VWA3B-201ENST00000409460 RNF17Q9BXT8 1623 aaKnown RBP12.94□□□□□ -0.34
VWA3B-201ENST00000409460 EFCAB6Q5THR3 1501 aa12.94□□□□□ -0.34
VWA3B-201ENST00000409460 DEPDC5O75140 1603 aa12.91□□□□□ -0.34
VWA3B-201ENST00000409460 RPRD2Q5VT52 1461 aaKnown RBP12.91□□□□□ -0.34
VWA3B-201ENST00000409460 POLR1AO95602 1720 aaPredicted RBP12.91□□□□□ -0.34
VWA3B-201ENST00000409460 TMEM94Q12767 1356 aa12.9□□□□□ -0.34
VWA3B-201ENST00000409460 TBX22Q9Y458 520 aa12.9□□□□□ -0.34
VWA3B-201ENST00000409460 LTKP29376 864 aa12.9□□□□□ -0.35
VWA3B-201ENST00000409460 RIMS2Q9UQ26 1411 aa12.89□□□□□ -0.35
VWA3B-201ENST00000409460 IQGAP1P46940 1657 aa12.89□□□□□ -0.35
VWA3B-201ENST00000409460 ROCK1Q13464 1354 aa12.88□□□□□ -0.35
VWA3B-201ENST00000409460 PRDM15P57071 1507 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms