RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 C3P01024 1663 aa12.5□□□□□ -0.41
LSM5-202ENST00000409292 STRCQ7RTU9 1775 aa12.5□□□□□ -0.41
LSM5-202ENST00000409292 ITSN2Q9NZM3 1697 aa12.49□□□□□ -0.41
LSM5-202ENST00000409292 FYCO1Q9BQS8 1478 aa12.49□□□□□ -0.41
LSM5-202ENST00000409292 SOCS7O14512 581 aa12.49□□□□□ -0.41
LSM5-202ENST00000409292 ZMYM3Q14202 1370 aa12.48□□□□□ -0.41
LSM5-202ENST00000409292 PKD2Q13563 968 aa12.48□□□□□ -0.41
LSM5-202ENST00000409292 NCOA1Q15788 1441 aa12.47□□□□□ -0.41
LSM5-202ENST00000409292 CCNB3Q8WWL7 1395 aa12.47□□□□□ -0.41
LSM5-202ENST00000409292 SPDYE1Q8NFV5 336 aaPredicted RBP12.47□□□□□ -0.41
LSM5-202ENST00000409292 HNRNPMP52272 730 aaKnown RBP eCLIP12.46□□□□□ -0.41
LSM5-202ENST00000409292 GGT6Q6P531 493 aa12.46□□□□□ -0.41
LSM5-202ENST00000409292 KIDINS220Q9ULH0 1771 aa12.46□□□□□ -0.42
LSM5-202ENST00000409292 MTUS2Q5JR59 1369 aa12.45□□□□□ -0.42
LSM5-202ENST00000409292 MROH2AA6NES4 1674 aa12.45□□□□□ -0.42
LSM5-202ENST00000409292 SAMD9LQ8IVG5 1584 aa12.45□□□□□ -0.42
LSM5-202ENST00000409292 KIAA1107Q9UPP5 1409 aa12.45□□□□□ -0.42
LSM5-202ENST00000409292 UBAP1LF5GYI3 381 aa12.44□□□□□ -0.42
LSM5-202ENST00000409292 PIP4P2Q8N4L2 257 aa12.44□□□□□ -0.42
LSM5-202ENST00000409292 CDC42BPAQ5VT25 1732 aa12.44□□□□□ -0.42
LSM5-202ENST00000409292 LRRIQ1Q96JM4 1722 aa12.44□□□□□ -0.42
LSM5-202ENST00000409292 CAMSAP1Q5T5Y3 1602 aa12.44□□□□□ -0.42
LSM5-202ENST00000409292 SYCP2Q9BX26 1530 aa12.43□□□□□ -0.42
LSM5-202ENST00000409292 GPATCH8Q9UKJ3 1502 aaKnown RBP12.43□□□□□ -0.42
LSM5-202ENST00000409292 A2MP01023 1474 aa12.43□□□□□ -0.42
LSM5-202ENST00000409292 SPATA31D1Q6ZQQ2 1576 aa12.43□□□□□ -0.42
LSM5-202ENST00000409292 ATP7AQ04656 1500 aa12.42□□□□□ -0.42
LSM5-202ENST00000409292 NCKAP5LQ9HCH0 1330 aa12.42□□□□□ -0.42
LSM5-202ENST00000409292 FXR2P51116 673 aaKnown RBP eCLIP12.42□□□□□ -0.42
LSM5-202ENST00000409292 SUPT6HQ7KZ85 1726 aaKnown RBP12.42□□□□□ -0.42
LSM5-202ENST00000409292 LTBP4Q8N2S1 1624 aa12.4□□□□□ -0.42
LSM5-202ENST00000409292 PLA2R1Q13018 1463 aa12.4□□□□□ -0.42
LSM5-202ENST00000409292 ILDR2Q71H61 639 aa12.4□□□□□ -0.42
LSM5-202ENST00000409292 RSPH4AQ5TD94 716 aa12.39□□□□□ -0.43
LSM5-202ENST00000409292 ZNF335Q9H4Z2 1342 aaPredicted RBP12.38□□□□□ -0.43
LSM5-202ENST00000409292 CLEC11AQ9Y240 323 aa12.38□□□□□ -0.43
LSM5-202ENST00000409292 CLTCQ00610 1675 aaKnown RBP12.38□□□□□ -0.43
LSM5-202ENST00000409292 TOM1O60784 492 aa12.37□□□□□ -0.43
LSM5-202ENST00000409292 CEP170BQ9Y4F5 1589 aaPredicted RBP12.37□□□□□ -0.43
LSM5-202ENST00000409292 PTPRKQ15262 1439 aa12.37□□□□□ -0.43
LSM5-202ENST00000409292 ADGBQ8N7X0 1667 aa12.36□□□□□ -0.43
LSM5-202ENST00000409292 INO80Q9ULG1 1556 aaPredicted RBP12.36□□□□□ -0.43
LSM5-202ENST00000409292 MYO3AQ8NEV4 1616 aa12.36□□□□□ -0.43
LSM5-202ENST00000409292 RTEL1-TNFRSF6BF6WH68 1400 aa12.36□□□□□ -0.43
LSM5-202ENST00000409292 PLXNC1O60486 1568 aa12.35□□□□□ -0.43
LSM5-202ENST00000409292 ZNF142P52746 1687 aaPredicted RBP12.35□□□□□ -0.43
LSM5-202ENST00000409292 WASHC2CQ9Y4E1 1318 aa12.35□□□□□ -0.43
LSM5-202ENST00000409292 A2ML1A8K2U0 1454 aa12.34□□□□□ -0.43
LSM5-202ENST00000409292 DHX29Q7Z478 1369 aaKnown RBP12.34□□□□□ -0.43
LSM5-202ENST00000409292 KIF3BO15066 747 aa12.34□□□□□ -0.43
LSM5-202ENST00000409292 TSPY4P0CV99 314 aa12.34□□□□□ -0.43
LSM5-202ENST00000409292 TSPY10P0CW01 314 aa12.34□□□□□ -0.43
LSM5-202ENST00000409292 ANKLE2Q86XL3 938 aa12.34□□□□□ -0.43
LSM5-202ENST00000409292 THEMISQ8N1K5 641 aaPredicted RBP12.34□□□□□ -0.43
LSM5-202ENST00000409292 TCOF1Q13428 1488 aaKnown RBP12.34□□□□□ -0.43
LSM5-202ENST00000409292 TNRQ92752 1358 aa12.33□□□□□ -0.44
LSM5-202ENST00000409292 EHBP1L1Q8N3D4 1523 aa12.33□□□□□ -0.44
LSM5-202ENST00000409292 FAM135AQ9P2D6 1515 aa12.32□□□□□ -0.44
LSM5-202ENST00000409292 PIP4K2BP78356 416 aa12.31□□□□□ -0.44
LSM5-202ENST00000409292 CPS1P31327 1500 aa12.31□□□□□ -0.44
LSM5-202ENST00000409292 CEP162Q5TB80 1403 aa12.3□□□□□ -0.44
LSM5-202ENST00000409292 ZNF644Q9H582 1327 aaPredicted RBP12.3□□□□□ -0.44
LSM5-202ENST00000409292 CCDC141Q6ZP82 1450 aa12.29□□□□□ -0.44
LSM5-202ENST00000409292 KDM5DQ9BY66 1539 aa12.28□□□□□ -0.44
LSM5-202ENST00000409292 TIAM1Q13009 1591 aa12.28□□□□□ -0.44
LSM5-202ENST00000409292 PZPP20742 1482 aa12.27□□□□□ -0.44
LSM5-202ENST00000409292 MBD5Q9P267 1494 aa12.27□□□□□ -0.44
LSM5-202ENST00000409292 DNMT1P26358 1616 aaKnown RBP12.27□□□□□ -0.44
LSM5-202ENST00000409292 FBXO31Q5XUX0 539 aaPredicted RBP12.27□□□□□ -0.45
LSM5-202ENST00000409292 NLRP1Q9C000 1473 aa12.27□□□□□ -0.45
LSM5-202ENST00000409292 SHANK2Q9UPX8 1470 aa12.27□□□□□ -0.45
LSM5-202ENST00000409292 HSPA1LP34931 641 aa12.25□□□□□ -0.45
LSM5-202ENST00000409292 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.25□□□□□ -0.45
LSM5-202ENST00000409292 MIA2Q96PC5 1412 aa12.25□□□□□ -0.45
LSM5-202ENST00000409292 POLR1AO95602 1720 aaPredicted RBP12.25□□□□□ -0.45
LSM5-202ENST00000409292 SPDYE4A6NLX3 237 aa12.24□□□□□ -0.45
LSM5-202ENST00000409292 NPHP4O75161 1426 aaPredicted RBP12.24□□□□□ -0.45
LSM5-202ENST00000409292 CAMSAP2Q08AD1 1489 aa12.24□□□□□ -0.45
LSM5-202ENST00000409292 UGGT1Q9NYU2 1555 aa12.23□□□□□ -0.45
LSM5-202ENST00000409292 NCOA2Q15596 1464 aa12.23□□□□□ -0.45
LSM5-202ENST00000409292 PRR29P0C7W0 189 aa12.23□□□□□ -0.45
LSM5-202ENST00000409292 PRKAR2AP13861 404 aaKnown RBP12.23□□□□□ -0.45
LSM5-202ENST00000409292 ARHGEF5Q12774 1597 aa12.19□□□□□ -0.46
LSM5-202ENST00000409292 HAX1O00165 279 aa12.19□□□□□ -0.46
LSM5-202ENST00000409292 EID1Q9Y6B2 187 aa12.19□□□□□ -0.46
LSM5-202ENST00000409292 MED14O60244 1454 aa12.19□□□□□ -0.46
LSM5-202ENST00000409292 DEPDC5O75140 1603 aa12.19□□□□□ -0.46
LSM5-202ENST00000409292 NEURL4Q96JN8 1562 aa12.18□□□□□ -0.46
LSM5-202ENST00000409292 STAG3Q9UJ98 1225 aa12.18□□□□□ -0.46
LSM5-202ENST00000409292 MED1Q15648 1581 aaPredicted RBP12.18□□□□□ -0.46
LSM5-202ENST00000409292 ZC3H13Q5T200 1668 aaKnown RBP12.17□□□□□ -0.46
LSM5-202ENST00000409292 VWDEQ8N2E2 1590 aa12.15□□□□□ -0.46
LSM5-202ENST00000409292 SP7Q8TDD2 431 aaPredicted RBP12.15□□□□□ -0.46
LSM5-202ENST00000409292 IQGAP1P46940 1657 aa12.15□□□□□ -0.46
LSM5-202ENST00000409292 KANK1Q14678 1352 aa12.15□□□□□ -0.46
LSM5-202ENST00000409292 TXNDC2Q86VQ3 553 aa12.14□□□□□ -0.47
LSM5-202ENST00000409292 ABCC3O15438 1527 aa12.14□□□□□ -0.47
LSM5-202ENST00000409292 EIF2AK4Q9P2K8 1649 aaKnown RBP12.14□□□□□ -0.47
LSM5-202ENST00000409292 ERVK-7P63135 1459 aa12.14□□□□□ -0.47
LSM5-202ENST00000409292 MYOM3Q5VTT5 1437 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms