RNA–Protein interactions for RNA: ENST00000409116.5

SNRNP27-202, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 5 BASIC

Gene SNRNP27, Length 1,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-202ENST00000409116 PHF23Q9BUL5 403 aaPredicted RBP22.74■■□□□ 1.23
SNRNP27-202ENST00000409116 ADAMTSL3P82987 1691 aa22.73■■□□□ 1.23
SNRNP27-202ENST00000409116 MROH1Q8NDA8 1641 aa22.73■■□□□ 1.23
SNRNP27-202ENST00000409116 MADDQ8WXG6 1647 aa22.72■■□□□ 1.23
SNRNP27-202ENST00000409116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.71■■□□□ 1.23
SNRNP27-202ENST00000409116 DEPDC5O75140 1603 aa22.7■■□□□ 1.22
SNRNP27-202ENST00000409116 KDM4FA0A1W2PPD8 638 aa22.7■■□□□ 1.22
SNRNP27-202ENST00000409116 SETD5Q9C0A6 1442 aa22.7■■□□□ 1.22
SNRNP27-202ENST00000409116 FER1L4A9Z1Z3 1794 aa22.69■■□□□ 1.22
SNRNP27-202ENST00000409116 PRDM15P57071 1507 aaPredicted RBP22.68■■□□□ 1.22
SNRNP27-202ENST00000409116 UNC13BO14795 1591 aa22.67■■□□□ 1.22
SNRNP27-202ENST00000409116 RIMS1Q86UR5 1692 aaKnown RBP22.65■■□□□ 1.22
SNRNP27-202ENST00000409116 KDM5DQ9BY66 1539 aa22.65■■□□□ 1.22
SNRNP27-202ENST00000409116 RAB3GAP2Q9H2M9 1393 aa22.65■■□□□ 1.22
SNRNP27-202ENST00000409116 ESF1Q9H501 851 aaKnown RBP22.64■■□□□ 1.22
SNRNP27-202ENST00000409116 CLTCQ00610 1675 aaKnown RBP22.64■■□□□ 1.21
SNRNP27-202ENST00000409116 ABCC3O15438 1527 aa22.63■■□□□ 1.21
SNRNP27-202ENST00000409116 WASHC2CQ9Y4E1 1318 aa22.63■■□□□ 1.21
SNRNP27-202ENST00000409116 KANK1Q14678 1352 aa22.63■■□□□ 1.21
SNRNP27-202ENST00000409116 PPP6R1Q9UPN7 881 aa22.62■■□□□ 1.21
SNRNP27-202ENST00000409116 VWDEQ8N2E2 1590 aa22.61■■□□□ 1.21
SNRNP27-202ENST00000409116 CEP152O94986 1710 aa22.61■■□□□ 1.21
SNRNP27-202ENST00000409116 FAM135AQ9P2D6 1515 aa22.61■■□□□ 1.21
SNRNP27-202ENST00000409116 NUP155O75694 1391 aa22.6■■□□□ 1.21
SNRNP27-202ENST00000409116 CNTLNQ9NXG0 1405 aa22.6■■□□□ 1.21
SNRNP27-202ENST00000409116 PCGF6Q9BYE7 350 aa22.59■■□□□ 1.21
SNRNP27-202ENST00000409116 ZC3H13Q5T200 1668 aaKnown RBP22.59■■□□□ 1.21
SNRNP27-202ENST00000409116 TRIM52Q96A61 297 aa22.58■■□□□ 1.21
SNRNP27-202ENST00000409116 PTPRMP28827 1452 aa22.57■■□□□ 1.2
SNRNP27-202ENST00000409116 PLPPR3Q6T4P5 718 aa22.57■■□□□ 1.2
SNRNP27-202ENST00000409116 IQGAP3Q86VI3 1631 aa22.57■■□□□ 1.2
SNRNP27-202ENST00000409116 MROH2AA6NES4 1674 aa22.56■■□□□ 1.2
SNRNP27-202ENST00000409116 LMTK2Q8IWU2 1503 aa22.55■■□□□ 1.2
SNRNP27-202ENST00000409116 ZMYM3Q14202 1370 aa22.55■■□□□ 1.2
SNRNP27-202ENST00000409116 CEBPAP49715 358 aaPredicted RBP22.55■■□□□ 1.2
SNRNP27-202ENST00000409116 CAMSAP1Q5T5Y3 1602 aa22.54■■□□□ 1.2
SNRNP27-202ENST00000409116 C3P01024 1663 aa22.54■■□□□ 1.2
SNRNP27-202ENST00000409116 PZPP20742 1482 aa22.52■■□□□ 1.2
SNRNP27-202ENST00000409116 EFCAB6Q5THR3 1501 aa22.52■■□□□ 1.2
SNRNP27-202ENST00000409116 TET3O43151 1660 aa22.51■■□□□ 1.19
SNRNP27-202ENST00000409116 NPATQ14207 1427 aa22.48■■□□□ 1.19
SNRNP27-202ENST00000409116 HRCP23327 699 aa22.48■■□□□ 1.19
SNRNP27-202ENST00000409116 ARHGAP31Q2M1Z3 1444 aa22.47■■□□□ 1.19
SNRNP27-202ENST00000409116 FBXO31Q5XUX0 539 aaPredicted RBP22.47■■□□□ 1.19
SNRNP27-202ENST00000409116 SLC4A1APQ9BWU0 796 aaKnown RBP22.47■■□□□ 1.19
SNRNP27-202ENST00000409116 E9PCH4 1651 aa22.45■■□□□ 1.18
SNRNP27-202ENST00000409116 ACIN1Q9UKV3 1341 aaKnown RBP22.45■■□□□ 1.18
SNRNP27-202ENST00000409116 MPHOSPH9Q99550 1183 aa22.43■■□□□ 1.18
SNRNP27-202ENST00000409116 ERVK-7P63135 1459 aa22.43■■□□□ 1.18
SNRNP27-202ENST00000409116 PKD2Q13563 968 aa22.42■■□□□ 1.18
SNRNP27-202ENST00000409116 CFAP65Q6ZU64 1925 aaKnown RBP22.41■■□□□ 1.18
SNRNP27-202ENST00000409116 RPRD2Q5VT52 1461 aaKnown RBP22.41■■□□□ 1.18
SNRNP27-202ENST00000409116 PREX1Q8TCU6 1659 aa22.41■■□□□ 1.18
SNRNP27-202ENST00000409116 FOXD1Q16676 465 aa22.39■■□□□ 1.18
SNRNP27-202ENST00000409116 SPATA31D1Q6ZQQ2 1576 aa22.39■■□□□ 1.17
SNRNP27-202ENST00000409116 TNRQ92752 1358 aa22.39■■□□□ 1.17
SNRNP27-202ENST00000409116 NOS1P29475 1434 aa22.36■■□□□ 1.17
SNRNP27-202ENST00000409116 SYNMO15061 1565 aa22.35■■□□□ 1.17
SNRNP27-202ENST00000409116 MYO3AQ8NEV4 1616 aa22.33■■□□□ 1.16
SNRNP27-202ENST00000409116 SPHKAPQ2M3C7 1700 aa22.32■■□□□ 1.16
SNRNP27-202ENST00000409116 UGGT1Q9NYU2 1555 aa22.31■■□□□ 1.16
SNRNP27-202ENST00000409116 PLA2R1Q13018 1463 aa22.31■■□□□ 1.16
SNRNP27-202ENST00000409116 PTPRTO14522 1441 aa22.31■■□□□ 1.16
SNRNP27-202ENST00000409116 UHRF1BP1Q6BDS2 1440 aa22.29■■□□□ 1.16
SNRNP27-202ENST00000409116 TRPM2O94759 1503 aa22.28■■□□□ 1.16
SNRNP27-202ENST00000409116 SETD1BQ9UPS6 1966 aaKnown RBP22.28■■□□□ 1.16
SNRNP27-202ENST00000409116 NLRP1Q9C000 1473 aa22.28■■□□□ 1.16
SNRNP27-202ENST00000409116 DHX57Q6P158 1386 aaKnown RBP22.27■■□□□ 1.16
SNRNP27-202ENST00000409116 IDI1Q13907 227 aa22.26■■□□□ 1.15
SNRNP27-202ENST00000409116 CEP170BQ9Y4F5 1589 aaPredicted RBP22.26■■□□□ 1.15
SNRNP27-202ENST00000409116 PIK3C2BO00750 1634 aa22.25■■□□□ 1.15
SNRNP27-202ENST00000409116 A2ML1A8K2U0 1454 aa22.24■■□□□ 1.15
SNRNP27-202ENST00000409116 LMTK3Q96Q04 1460 aa22.24■■□□□ 1.15
SNRNP27-202ENST00000409116 SLC52A1Q9NWF4 448 aa22.24■■□□□ 1.15
SNRNP27-202ENST00000409116 CLTCL1P53675 1640 aa22.24■■□□□ 1.15
SNRNP27-202ENST00000409116 ZNF142P52746 1687 aaPredicted RBP22.23■■□□□ 1.15
SNRNP27-202ENST00000409116 ANKRD30BQ9BXX2 1392 aa22.22■■□□□ 1.15
SNRNP27-202ENST00000409116 ADGRB3O60242 1522 aa22.19■■□□□ 1.14
SNRNP27-202ENST00000409116 CCDC144AA2RUR9 1427 aa22.19■■□□□ 1.14
SNRNP27-202ENST00000409116 CHGAP10645 457 aaKnown RBP22.18■■□□□ 1.14
SNRNP27-202ENST00000409116 HSPA2P54652 639 aa22.18■■□□□ 1.14
SNRNP27-202ENST00000409116 UBR1Q8IWV7 1749 aa22.18■■□□□ 1.14
SNRNP27-202ENST00000409116 STAG3Q9UJ98 1225 aa22.17■■□□□ 1.14
SNRNP27-202ENST00000409116 TMEM131LA2VDJ0 1609 aa22.15■■□□□ 1.14
SNRNP27-202ENST00000409116 KDM5AP29375 1690 aaKnown RBP22.13■■□□□ 1.13
SNRNP27-202ENST00000409116 MYO5BQ9ULV0 1848 aa22.12■■□□□ 1.13
SNRNP27-202ENST00000409116 THEMISQ8N1K5 641 aaPredicted RBP22.11■■□□□ 1.13
SNRNP27-202ENST00000409116 KIF1BO60333 1816 aa22.1■■□□□ 1.13
SNRNP27-202ENST00000409116 SIN3AQ96ST3 1273 aa22.08■■□□□ 1.13
SNRNP27-202ENST00000409116 SPATA31E1Q6ZUB1 1445 aa22.08■■□□□ 1.12
SNRNP27-202ENST00000409116 ZNF326Q5BKZ1 582 aaKnown RBP22.07■■□□□ 1.12
SNRNP27-202ENST00000409116 TMEM2Q9UHN6 1383 aa22.07■■□□□ 1.12
SNRNP27-202ENST00000409116 CCER1Q8TC90 406 aaPredicted RBP22.06■■□□□ 1.12
SNRNP27-202ENST00000409116 SLIT1O75093 1534 aa22.06■■□□□ 1.12
SNRNP27-202ENST00000409116 ARHGAP23Q9P227 1491 aa22.06■■□□□ 1.12
SNRNP27-202ENST00000409116 RGL3Q3MIN7 710 aa22.06■■□□□ 1.12
SNRNP27-202ENST00000409116 RIMS2Q9UQ26 1411 aa22.04■■□□□ 1.12
SNRNP27-202ENST00000409116 NEUROD1Q13562 356 aa22.04■■□□□ 1.12
SNRNP27-202ENST00000409116 ZFYVE9O95405 1425 aa22.03■■□□□ 1.12
SNRNP27-202ENST00000409116 NCKAP5LQ9HCH0 1330 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms