RNA–Protein interactions for RNA: ENST00000409102.5

TMEM139-202, Transcript of transmembrane protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM139, Length 1,226 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-202ENST00000409102 CPS1P31327 1500 aa13.52□□□□□ -0.25
TMEM139-202ENST00000409102 KDM5DQ9BY66 1539 aa13.51□□□□□ -0.25
TMEM139-202ENST00000409102 PZPP20742 1482 aa13.51□□□□□ -0.25
TMEM139-202ENST00000409102 DHX29Q7Z478 1369 aaKnown RBP13.5□□□□□ -0.25
TMEM139-202ENST00000409102 ZNF644Q9H582 1327 aaPredicted RBP13.5□□□□□ -0.25
TMEM139-202ENST00000409102 MED1Q15648 1581 aaPredicted RBP13.49□□□□□ -0.25
TMEM139-202ENST00000409102 CEP162Q5TB80 1403 aa13.49□□□□□ -0.25
TMEM139-202ENST00000409102 TNRQ92752 1358 aa13.49□□□□□ -0.25
TMEM139-202ENST00000409102 CCDC141Q6ZP82 1450 aa13.48□□□□□ -0.25
TMEM139-202ENST00000409102 SHANK2Q9UPX8 1470 aa13.48□□□□□ -0.25
TMEM139-202ENST00000409102 VWDEQ8N2E2 1590 aa13.48□□□□□ -0.25
TMEM139-202ENST00000409102 HSPA1LP34931 641 aa13.46□□□□□ -0.25
TMEM139-202ENST00000409102 DEPDC5O75140 1603 aa13.46□□□□□ -0.26
TMEM139-202ENST00000409102 CAMSAP2Q08AD1 1489 aa13.45□□□□□ -0.26
TMEM139-202ENST00000409102 NLRP1Q9C000 1473 aa13.45□□□□□ -0.26
TMEM139-202ENST00000409102 ALKQ9UM73 1620 aa13.45□□□□□ -0.26
TMEM139-202ENST00000409102 MED14O60244 1454 aa13.44□□□□□ -0.26
TMEM139-202ENST00000409102 FBXO31Q5XUX0 539 aaPredicted RBP13.44□□□□□ -0.26
TMEM139-202ENST00000409102 KIF3BO15066 747 aa13.43□□□□□ -0.26
TMEM139-202ENST00000409102 TOM1O60784 492 aa13.43□□□□□ -0.26
TMEM139-202ENST00000409102 ARHGEF5Q12774 1597 aa13.43□□□□□ -0.26
TMEM139-202ENST00000409102 UGGT1Q9NYU2 1555 aa13.43□□□□□ -0.26
TMEM139-202ENST00000409102 IQGAP1P46940 1657 aa13.43□□□□□ -0.26
TMEM139-202ENST00000409102 RNF17Q9BXT8 1623 aaKnown RBP13.42□□□□□ -0.26
TMEM139-202ENST00000409102 NCOA2Q15596 1464 aa13.42□□□□□ -0.26
TMEM139-202ENST00000409102 SCAF1Q9H7N4 1312 aaKnown RBP13.42□□□□□ -0.26
TMEM139-202ENST00000409102 NPHP4O75161 1426 aaPredicted RBP13.42□□□□□ -0.26
TMEM139-202ENST00000409102 MIA2Q96PC5 1412 aa13.42□□□□□ -0.26
TMEM139-202ENST00000409102 PIP4K2BP78356 416 aa13.42□□□□□ -0.26
TMEM139-202ENST00000409102 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.42□□□□□ -0.26
TMEM139-202ENST00000409102 ZC3H13Q5T200 1668 aaKnown RBP13.41□□□□□ -0.26
TMEM139-202ENST00000409102 ANKLE2Q86XL3 938 aa13.41□□□□□ -0.26
TMEM139-202ENST00000409102 SYNMO15061 1565 aa13.41□□□□□ -0.26
TMEM139-202ENST00000409102 WASHC2CQ9Y4E1 1318 aa13.4□□□□□ -0.26
TMEM139-202ENST00000409102 STRCP1A6NGW2 1772 aa13.4□□□□□ -0.26
TMEM139-202ENST00000409102 ABCC3O15438 1527 aa13.39□□□□□ -0.27
TMEM139-202ENST00000409102 RSPH4AQ5TD94 716 aa13.39□□□□□ -0.27
TMEM139-202ENST00000409102 THEMISQ8N1K5 641 aaPredicted RBP13.39□□□□□ -0.27
TMEM139-202ENST00000409102 EIF2AK4Q9P2K8 1649 aaKnown RBP13.38□□□□□ -0.27
TMEM139-202ENST00000409102 MAST1Q9Y2H9 1570 aa13.37□□□□□ -0.27
TMEM139-202ENST00000409102 LRRC7Q96NW7 1537 aa13.37□□□□□ -0.27
TMEM139-202ENST00000409102 ERVK-7P63135 1459 aa13.36□□□□□ -0.27
TMEM139-202ENST00000409102 MROH1Q8NDA8 1641 aa13.35□□□□□ -0.27
TMEM139-202ENST00000409102 UBR1Q8IWV7 1749 aa13.35□□□□□ -0.27
TMEM139-202ENST00000409102 CEP152O94986 1710 aa13.33□□□□□ -0.28
TMEM139-202ENST00000409102 TSPY4P0CV99 314 aa13.32□□□□□ -0.28
TMEM139-202ENST00000409102 TSPY10P0CW01 314 aa13.32□□□□□ -0.28
TMEM139-202ENST00000409102 PHF23Q9BUL5 403 aaPredicted RBP13.32□□□□□ -0.28
TMEM139-202ENST00000409102 SCAF11Q99590 1463 aaKnown RBP13.31□□□□□ -0.28
TMEM139-202ENST00000409102 ARHGAP23Q9P227 1491 aa13.3□□□□□ -0.28
TMEM139-202ENST00000409102 XIRP1Q702N8 1843 aaKnown RBP13.29□□□□□ -0.28
TMEM139-202ENST00000409102 LRRC9Q6ZRR7 1453 aa13.29□□□□□ -0.28
TMEM139-202ENST00000409102 SLIT1O75093 1534 aa13.29□□□□□ -0.28
TMEM139-202ENST00000409102 CFAP65Q6ZU64 1925 aaKnown RBP13.29□□□□□ -0.28
TMEM139-202ENST00000409102 PRDM15P57071 1507 aaPredicted RBP13.29□□□□□ -0.28
TMEM139-202ENST00000409102 DUOX2Q9NRD8 1548 aa13.28□□□□□ -0.28
TMEM139-202ENST00000409102 ARHGAP31Q2M1Z3 1444 aa13.26□□□□□ -0.29
TMEM139-202ENST00000409102 VPS8Q8N3P4 1428 aa13.25□□□□□ -0.29
TMEM139-202ENST00000409102 CROCC2H7BZ55 1655 aa13.24□□□□□ -0.29
TMEM139-202ENST00000409102 MYOM3Q5VTT5 1437 aa13.24□□□□□ -0.29
TMEM139-202ENST00000409102 KDM5AP29375 1690 aaKnown RBP13.24□□□□□ -0.29
TMEM139-202ENST00000409102 PIK3C2BO00750 1634 aa13.24□□□□□ -0.29
TMEM139-202ENST00000409102 MAP3K1Q13233 1512 aa13.23□□□□□ -0.29
TMEM139-202ENST00000409102 ERBINQ96RT1 1412 aa13.23□□□□□ -0.29
TMEM139-202ENST00000409102 LTKP29376 864 aa13.23□□□□□ -0.29
TMEM139-202ENST00000409102 SENP3Q9H4L4 574 aaPredicted RBP13.23□□□□□ -0.29
TMEM139-202ENST00000409102 KIF15Q9NS87 1388 aa13.21□□□□□ -0.29
TMEM139-202ENST00000409102 TXNDC2Q86VQ3 553 aa13.21□□□□□ -0.29
TMEM139-202ENST00000409102 RGS17Q9UGC6 210 aaPredicted RBP13.21□□□□□ -0.29
TMEM139-202ENST00000409102 FAM135BQ49AJ0 1406 aa13.21□□□□□ -0.3
TMEM139-202ENST00000409102 TMEM2Q9UHN6 1383 aa13.2□□□□□ -0.3
TMEM139-202ENST00000409102 EFCAB6Q5THR3 1501 aa13.19□□□□□ -0.3
TMEM139-202ENST00000409102 EID1Q9Y6B2 187 aa13.18□□□□□ -0.3
TMEM139-202ENST00000409102 TMEM94Q12767 1356 aa13.18□□□□□ -0.3
TMEM139-202ENST00000409102 LMTK2Q8IWU2 1503 aa13.18□□□□□ -0.3
TMEM139-202ENST00000409102 ROBO1Q9Y6N7 1651 aa13.18□□□□□ -0.3
TMEM139-202ENST00000409102 NWD1Q149M9 1564 aa13.17□□□□□ -0.3
TMEM139-202ENST00000409102 ABCC5O15440 1437 aa13.17□□□□□ -0.3
TMEM139-202ENST00000409102 KANK4Q5T7N3 995 aaPredicted RBP13.17□□□□□ -0.3
TMEM139-202ENST00000409102 TET3O43151 1660 aa13.17□□□□□ -0.3
TMEM139-202ENST00000409102 ADGRB3O60242 1522 aa13.16□□□□□ -0.3
TMEM139-202ENST00000409102 PTPN23Q9H3S7 1636 aa13.16□□□□□ -0.3
TMEM139-202ENST00000409102 NKTRP30414 1462 aaKnown RBP13.16□□□□□ -0.3
TMEM139-202ENST00000409102 KANK1Q14678 1352 aa13.14□□□□□ -0.31
TMEM139-202ENST00000409102 DAPK1P53355 1430 aa13.13□□□□□ -0.31
TMEM139-202ENST00000409102 KCNA6P17658 529 aa13.13□□□□□ -0.31
TMEM139-202ENST00000409102 RRP7BPQ9NSQ0 103 aa13.13□□□□□ -0.31
TMEM139-202ENST00000409102 NOS1P29475 1434 aa13.13□□□□□ -0.31
TMEM139-202ENST00000409102 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.12□□□□□ -0.31
TMEM139-202ENST00000409102 IDI1Q13907 227 aa13.11□□□□□ -0.31
TMEM139-202ENST00000409102 POTEAQ6S8J7 498 aa13.11□□□□□ -0.31
TMEM139-202ENST00000409102 STAG3Q9UJ98 1225 aa13.11□□□□□ -0.31
TMEM139-202ENST00000409102 FGD6Q6ZV73 1430 aa13.1□□□□□ -0.31
TMEM139-202ENST00000409102 SETD1AO15047 1707 aaKnown RBP13.1□□□□□ -0.31
TMEM139-202ENST00000409102 PHLPP1O60346 1717 aa13.1□□□□□ -0.31
TMEM139-202ENST00000409102 SLC26A8Q96RN1 970 aa13.09□□□□□ -0.31
TMEM139-202ENST00000409102 MSH6P52701 1360 aa13.08□□□□□ -0.31
TMEM139-202ENST00000409102 ANKRD30AQ9BXX3 1397 aa13.08□□□□□ -0.31
TMEM139-202ENST00000409102 PROSER2Q86WR7 435 aaPredicted RBP13.08□□□□□ -0.32
TMEM139-202ENST00000409102 RPRD2Q5VT52 1461 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms