RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 SHANK2Q9UPX8 1470 aa19.95■□□□□ 0.78
SNORD88B-201ENST00000408454 PTPRKQ15262 1439 aa19.94■□□□□ 0.78
SNORD88B-201ENST00000408454 NCOA1Q15788 1441 aa19.94■□□□□ 0.78
SNORD88B-201ENST00000408454 ZNF142P52746 1687 aaPredicted RBP19.94■□□□□ 0.78
SNORD88B-201ENST00000408454 ZC3H13Q5T200 1668 aaKnown RBP19.94■□□□□ 0.78
SNORD88B-201ENST00000408454 PZPP20742 1482 aa19.92■□□□□ 0.78
SNORD88B-201ENST00000408454 DUOX2Q9NRD8 1548 aa19.92■□□□□ 0.78
SNORD88B-201ENST00000408454 CEP170BQ9Y4F5 1589 aaPredicted RBP19.92■□□□□ 0.78
SNORD88B-201ENST00000408454 MYO3AQ8NEV4 1616 aa19.92■□□□□ 0.78
SNORD88B-201ENST00000408454 KANK4Q5T7N3 995 aaPredicted RBP19.91■□□□□ 0.78
SNORD88B-201ENST00000408454 A2ML1A8K2U0 1454 aa19.91■□□□□ 0.78
SNORD88B-201ENST00000408454 CAMSAP1Q5T5Y3 1602 aa19.91■□□□□ 0.78
SNORD88B-201ENST00000408454 KANK1Q14678 1352 aa19.9■□□□□ 0.78
SNORD88B-201ENST00000408454 TNRQ92752 1358 aa19.9■□□□□ 0.78
SNORD88B-201ENST00000408454 IQSEC2Q5JU85 1478 aa19.9■□□□□ 0.78
SNORD88B-201ENST00000408454 NLRP1Q9C000 1473 aa19.9■□□□□ 0.78
SNORD88B-201ENST00000408454 ERBINQ96RT1 1412 aa19.89■□□□□ 0.77
SNORD88B-201ENST00000408454 THEMISQ8N1K5 641 aaPredicted RBP19.88■□□□□ 0.77
SNORD88B-201ENST00000408454 RNF17Q9BXT8 1623 aaKnown RBP19.87■□□□□ 0.77
SNORD88B-201ENST00000408454 PTPN23Q9H3S7 1636 aa19.87■□□□□ 0.77
SNORD88B-201ENST00000408454 FGD6Q6ZV73 1430 aa19.87■□□□□ 0.77
SNORD88B-201ENST00000408454 ANKRD30AQ9BXX3 1397 aa19.87■□□□□ 0.77
SNORD88B-201ENST00000408454 STRCQ7RTU9 1775 aa19.87■□□□□ 0.77
SNORD88B-201ENST00000408454 KIF15Q9NS87 1388 aa19.85■□□□□ 0.77
SNORD88B-201ENST00000408454 TCOF1Q13428 1488 aaKnown RBP19.84■□□□□ 0.77
SNORD88B-201ENST00000408454 DAPK1P53355 1430 aa19.82■□□□□ 0.76
SNORD88B-201ENST00000408454 CROCC2H7BZ55 1655 aa19.81■□□□□ 0.76
SNORD88B-201ENST00000408454 DNMT1P26358 1616 aaKnown RBP19.81■□□□□ 0.76
SNORD88B-201ENST00000408454 ANKLE2Q86XL3 938 aa19.81■□□□□ 0.76
SNORD88B-201ENST00000408454 ABCC3O15438 1527 aa19.79■□□□□ 0.76
SNORD88B-201ENST00000408454 ABCC5O15440 1437 aa19.78■□□□□ 0.76
SNORD88B-201ENST00000408454 UGGT1Q9NYU2 1555 aa19.78■□□□□ 0.76
SNORD88B-201ENST00000408454 ARHGAP31Q2M1Z3 1444 aa19.76■□□□□ 0.75
SNORD88B-201ENST00000408454 PRDM15P57071 1507 aaPredicted RBP19.76■□□□□ 0.75
SNORD88B-201ENST00000408454 RRP7BPQ9NSQ0 103 aa19.75■□□□□ 0.75
SNORD88B-201ENST00000408454 NCKAP5LQ9HCH0 1330 aa19.75■□□□□ 0.75
SNORD88B-201ENST00000408454 SPATA31D1Q6ZQQ2 1576 aa19.74■□□□□ 0.75
SNORD88B-201ENST00000408454 FAM50AQ14320 339 aaKnown RBP19.74■□□□□ 0.75
SNORD88B-201ENST00000408454 POLR1AO95602 1720 aaPredicted RBP19.72■□□□□ 0.75
SNORD88B-201ENST00000408454 FBXO31Q5XUX0 539 aaPredicted RBP19.72■□□□□ 0.75
SNORD88B-201ENST00000408454 ERVK-7P63135 1459 aa19.72■□□□□ 0.75
SNORD88B-201ENST00000408454 ADGRL2O95490 1459 aa19.71■□□□□ 0.75
SNORD88B-201ENST00000408454 CPS1P31327 1500 aa19.71■□□□□ 0.75
SNORD88B-201ENST00000408454 DEPDC5O75140 1603 aa19.7■□□□□ 0.74
SNORD88B-201ENST00000408454 STAG3Q9UJ98 1225 aa19.69■□□□□ 0.74
SNORD88B-201ENST00000408454 EID1Q9Y6B2 187 aa19.69■□□□□ 0.74
SNORD88B-201ENST00000408454 LTBP4Q8N2S1 1624 aa19.69■□□□□ 0.74
SNORD88B-201ENST00000408454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.68■□□□□ 0.74
SNORD88B-201ENST00000408454 MROH1Q8NDA8 1641 aa19.67■□□□□ 0.74
SNORD88B-201ENST00000408454 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.67■□□□□ 0.74
SNORD88B-201ENST00000408454 MED14O60244 1454 aa19.67■□□□□ 0.74
SNORD88B-201ENST00000408454 LMTK2Q8IWU2 1503 aa19.66■□□□□ 0.74
SNORD88B-201ENST00000408454 NPHP4O75161 1426 aaPredicted RBP19.66■□□□□ 0.74
SNORD88B-201ENST00000408454 CHIC2Q9UKJ5 165 aa19.65■□□□□ 0.74
SNORD88B-201ENST00000408454 ANKRD50Q9ULJ7 1429 aa19.65■□□□□ 0.74
SNORD88B-201ENST00000408454 CEP152O94986 1710 aa19.65■□□□□ 0.74
SNORD88B-201ENST00000408454 HDGFP51858 240 aaKnown RBP19.64■□□□□ 0.73
SNORD88B-201ENST00000408454 RPRD2Q5VT52 1461 aaKnown RBP19.64■□□□□ 0.73
SNORD88B-201ENST00000408454 ZNF335Q9H4Z2 1342 aaPredicted RBP19.63■□□□□ 0.73
SNORD88B-201ENST00000408454 ROCK1Q13464 1354 aa19.62■□□□□ 0.73
SNORD88B-201ENST00000408454 TOM1O60784 492 aa19.62■□□□□ 0.73
SNORD88B-201ENST00000408454 SLC52A1Q9NWF4 448 aa19.62■□□□□ 0.73
SNORD88B-201ENST00000408454 KDM5AP29375 1690 aaKnown RBP19.61■□□□□ 0.73
SNORD88B-201ENST00000408454 UBAP1LF5GYI3 381 aa19.6■□□□□ 0.73
SNORD88B-201ENST00000408454 SCAF11Q99590 1463 aaKnown RBP19.6■□□□□ 0.73
SNORD88B-201ENST00000408454 IQGAP1P46940 1657 aa19.59■□□□□ 0.73
SNORD88B-201ENST00000408454 NEURL4Q96JN8 1562 aa19.58■□□□□ 0.73
SNORD88B-201ENST00000408454 EFCAB6Q5THR3 1501 aa19.58■□□□□ 0.73
SNORD88B-201ENST00000408454 VWDEQ8N2E2 1590 aa19.57■□□□□ 0.72
SNORD88B-201ENST00000408454 SLIT1O75093 1534 aa19.56■□□□□ 0.72
SNORD88B-201ENST00000408454 UBR1Q8IWV7 1749 aa19.56■□□□□ 0.72
SNORD88B-201ENST00000408454 TXNDC2Q86VQ3 553 aa19.55■□□□□ 0.72
SNORD88B-201ENST00000408454 ARHGAP23Q9P227 1491 aa19.54■□□□□ 0.72
SNORD88B-201ENST00000408454 SYNMO15061 1565 aa19.53■□□□□ 0.72
SNORD88B-201ENST00000408454 TMEM2Q9UHN6 1383 aa19.53■□□□□ 0.72
SNORD88B-201ENST00000408454 TET3O43151 1660 aa19.51■□□□□ 0.71
SNORD88B-201ENST00000408454 NOS1P29475 1434 aa19.51■□□□□ 0.71
SNORD88B-201ENST00000408454 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.49■□□□□ 0.71
SNORD88B-201ENST00000408454 UNC13BO14795 1591 aa19.49■□□□□ 0.71
SNORD88B-201ENST00000408454 ADGRB3O60242 1522 aa19.48■□□□□ 0.71
SNORD88B-201ENST00000408454 SCAF1Q9H7N4 1312 aaKnown RBP19.48■□□□□ 0.71
SNORD88B-201ENST00000408454 PIK3C2BO00750 1634 aa19.47■□□□□ 0.71
SNORD88B-201ENST00000408454 GCC2Q8IWJ2 1684 aa19.47■□□□□ 0.71
SNORD88B-201ENST00000408454 PPP1R15AO75807 674 aaPredicted RBP19.46■□□□□ 0.71
SNORD88B-201ENST00000408454 IDI1Q13907 227 aa19.46■□□□□ 0.71
SNORD88B-201ENST00000408454 ACIN1Q9UKV3 1341 aaKnown RBP19.45■□□□□ 0.7
SNORD88B-201ENST00000408454 BCANQ96GW7 911 aa19.44■□□□□ 0.7
SNORD88B-201ENST00000408454 CFAP65Q6ZU64 1925 aaKnown RBP19.44■□□□□ 0.7
SNORD88B-201ENST00000408454 DISP3Q9P2K9 1392 aa19.44■□□□□ 0.7
SNORD88B-201ENST00000408454 NUP155O75694 1391 aa19.43■□□□□ 0.7
SNORD88B-201ENST00000408454 ITGAEP38570 1179 aa19.42■□□□□ 0.7
SNORD88B-201ENST00000408454 IQGAP3Q86VI3 1631 aa19.42■□□□□ 0.7
SNORD88B-201ENST00000408454 LTKP29376 864 aa19.4■□□□□ 0.7
SNORD88B-201ENST00000408454 RRBP1Q9P2E9 1410 aaKnown RBP19.39■□□□□ 0.69
SNORD88B-201ENST00000408454 PIP4K2BP78356 416 aa19.38■□□□□ 0.69
SNORD88B-201ENST00000408454 LRRC7Q96NW7 1537 aa19.38■□□□□ 0.69
SNORD88B-201ENST00000408454 NKTRP30414 1462 aaKnown RBP19.37■□□□□ 0.69
SNORD88B-201ENST00000408454 KCNA6P17658 529 aa19.37■□□□□ 0.69
SNORD88B-201ENST00000408454 PLEKHG1Q9ULL1 1385 aa19.36■□□□□ 0.69
SNORD88B-201ENST00000408454 CHGAP10645 457 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms