RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 PTPRKQ15262 1439 aa14.11□□□□□ -0.15
SNORD88A-201ENST00000408314 ILDR1Q86SU0 546 aaPredicted RBP14.11□□□□□ -0.15
SNORD88A-201ENST00000408314 RNF17Q9BXT8 1623 aaKnown RBP14.11□□□□□ -0.15
SNORD88A-201ENST00000408314 TCOF1Q13428 1488 aaKnown RBP14.11□□□□□ -0.15
SNORD88A-201ENST00000408314 WASHC2CQ9Y4E1 1318 aa14.11□□□□□ -0.15
SNORD88A-201ENST00000408314 ZC3H13Q5T200 1668 aaKnown RBP14.1□□□□□ -0.15
SNORD88A-201ENST00000408314 DUOX2Q9NRD8 1548 aa14.1□□□□□ -0.15
SNORD88A-201ENST00000408314 PZPP20742 1482 aa14.1□□□□□ -0.15
SNORD88A-201ENST00000408314 PTPRTO14522 1441 aa14.09□□□□□ -0.15
SNORD88A-201ENST00000408314 CEP170BQ9Y4F5 1589 aaPredicted RBP14.09□□□□□ -0.15
SNORD88A-201ENST00000408314 DNMT1P26358 1616 aaKnown RBP14.08□□□□□ -0.15
SNORD88A-201ENST00000408314 NCOA1Q15788 1441 aa14.08□□□□□ -0.15
SNORD88A-201ENST00000408314 ERBINQ96RT1 1412 aa14.08□□□□□ -0.15
SNORD88A-201ENST00000408314 PLA2R1Q13018 1463 aa14.08□□□□□ -0.16
SNORD88A-201ENST00000408314 FBXO41Q8TF61 875 aa14.08□□□□□ -0.16
SNORD88A-201ENST00000408314 DAPK1P53355 1430 aa14.07□□□□□ -0.16
SNORD88A-201ENST00000408314 STRCQ7RTU9 1775 aa14.07□□□□□ -0.16
SNORD88A-201ENST00000408314 KIF15Q9NS87 1388 aa14.07□□□□□ -0.16
SNORD88A-201ENST00000408314 CAMSAP1Q5T5Y3 1602 aa14.06□□□□□ -0.16
SNORD88A-201ENST00000408314 TNRQ92752 1358 aa14.06□□□□□ -0.16
SNORD88A-201ENST00000408314 ANKRD30AQ9BXX3 1397 aa14.06□□□□□ -0.16
SNORD88A-201ENST00000408314 ABCC5O15440 1437 aa14.06□□□□□ -0.16
SNORD88A-201ENST00000408314 A2ML1A8K2U0 1454 aa14.06□□□□□ -0.16
SNORD88A-201ENST00000408314 PKD2Q13563 968 aa14.04□□□□□ -0.16
SNORD88A-201ENST00000408314 NLRP1Q9C000 1473 aa14.04□□□□□ -0.16
SNORD88A-201ENST00000408314 ABCC3O15438 1527 aa14.04□□□□□ -0.16
SNORD88A-201ENST00000408314 PRDM15P57071 1507 aaPredicted RBP14.02□□□□□ -0.16
SNORD88A-201ENST00000408314 KANK1Q14678 1352 aa14.02□□□□□ -0.17
SNORD88A-201ENST00000408314 CERKQ8TCT0 537 aa14.01□□□□□ -0.17
SNORD88A-201ENST00000408314 MROH1Q8NDA8 1641 aa14□□□□□ -0.17
SNORD88A-201ENST00000408314 ADGRL2O95490 1459 aa13.99□□□□□ -0.17
SNORD88A-201ENST00000408314 FAM50AQ14320 339 aaKnown RBP13.99□□□□□ -0.17
SNORD88A-201ENST00000408314 RRP7BPQ9NSQ0 103 aa13.99□□□□□ -0.17
SNORD88A-201ENST00000408314 SPATA31D1Q6ZQQ2 1576 aa13.99□□□□□ -0.17
SNORD88A-201ENST00000408314 DEPDC5O75140 1603 aa13.98□□□□□ -0.17
SNORD88A-201ENST00000408314 ARHGAP31Q2M1Z3 1444 aa13.98□□□□□ -0.17
SNORD88A-201ENST00000408314 UGGT1Q9NYU2 1555 aa13.97□□□□□ -0.17
SNORD88A-201ENST00000408314 FBXO31Q5XUX0 539 aaPredicted RBP13.97□□□□□ -0.17
SNORD88A-201ENST00000408314 THEMISQ8N1K5 641 aaPredicted RBP13.97□□□□□ -0.17
SNORD88A-201ENST00000408314 CEP152O94986 1710 aa13.97□□□□□ -0.17
SNORD88A-201ENST00000408314 ERVK-7P63135 1459 aa13.97□□□□□ -0.17
SNORD88A-201ENST00000408314 IQSEC2Q5JU85 1478 aa13.97□□□□□ -0.17
SNORD88A-201ENST00000408314 POLR1AO95602 1720 aaPredicted RBP13.95□□□□□ -0.18
SNORD88A-201ENST00000408314 CHIC2Q9UKJ5 165 aa13.95□□□□□ -0.18
SNORD88A-201ENST00000408314 NCKAP5LQ9HCH0 1330 aa13.94□□□□□ -0.18
SNORD88A-201ENST00000408314 LMTK2Q8IWU2 1503 aa13.94□□□□□ -0.18
SNORD88A-201ENST00000408314 ANKLE2Q86XL3 938 aa13.93□□□□□ -0.18
SNORD88A-201ENST00000408314 ANKRD50Q9ULJ7 1429 aa13.92□□□□□ -0.18
SNORD88A-201ENST00000408314 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.92□□□□□ -0.18
SNORD88A-201ENST00000408314 LTBP4Q8N2S1 1624 aa13.92□□□□□ -0.18
SNORD88A-201ENST00000408314 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.92□□□□□ -0.18
SNORD88A-201ENST00000408314 ROCK1Q13464 1354 aa13.91□□□□□ -0.18
SNORD88A-201ENST00000408314 VWDEQ8N2E2 1590 aa13.91□□□□□ -0.18
SNORD88A-201ENST00000408314 EFCAB6Q5THR3 1501 aa13.89□□□□□ -0.19
SNORD88A-201ENST00000408314 NEURL4Q96JN8 1562 aa13.88□□□□□ -0.19
SNORD88A-201ENST00000408314 MED14O60244 1454 aa13.88□□□□□ -0.19
SNORD88A-201ENST00000408314 RPRD2Q5VT52 1461 aaKnown RBP13.88□□□□□ -0.19
SNORD88A-201ENST00000408314 NPHP4O75161 1426 aaPredicted RBP13.88□□□□□ -0.19
SNORD88A-201ENST00000408314 CPS1P31327 1500 aa13.87□□□□□ -0.19
SNORD88A-201ENST00000408314 KDM5AP29375 1690 aaKnown RBP13.87□□□□□ -0.19
SNORD88A-201ENST00000408314 UBR1Q8IWV7 1749 aa13.87□□□□□ -0.19
SNORD88A-201ENST00000408314 UNC13BO14795 1591 aa13.86□□□□□ -0.19
SNORD88A-201ENST00000408314 ZNF335Q9H4Z2 1342 aaPredicted RBP13.86□□□□□ -0.19
SNORD88A-201ENST00000408314 IQGAP1P46940 1657 aa13.85□□□□□ -0.19
SNORD88A-201ENST00000408314 STAG3Q9UJ98 1225 aa13.85□□□□□ -0.19
SNORD88A-201ENST00000408314 SCAF11Q99590 1463 aaKnown RBP13.85□□□□□ -0.19
SNORD88A-201ENST00000408314 TET3O43151 1660 aa13.85□□□□□ -0.19
SNORD88A-201ENST00000408314 SLIT1O75093 1534 aa13.85□□□□□ -0.19
SNORD88A-201ENST00000408314 CFAP65Q6ZU64 1925 aaKnown RBP13.84□□□□□ -0.19
SNORD88A-201ENST00000408314 EID1Q9Y6B2 187 aa13.84□□□□□ -0.19
SNORD88A-201ENST00000408314 SLC52A1Q9NWF4 448 aa13.83□□□□□ -0.2
SNORD88A-201ENST00000408314 PIK3C2BO00750 1634 aa13.82□□□□□ -0.2
SNORD88A-201ENST00000408314 NOS1P29475 1434 aa13.82□□□□□ -0.2
SNORD88A-201ENST00000408314 GCC2Q8IWJ2 1684 aa13.82□□□□□ -0.2
SNORD88A-201ENST00000408314 ARHGAP23Q9P227 1491 aa13.82□□□□□ -0.2
SNORD88A-201ENST00000408314 RRBP1Q9P2E9 1410 aaKnown RBP13.81□□□□□ -0.2
SNORD88A-201ENST00000408314 ADGRB3O60242 1522 aa13.8□□□□□ -0.2
SNORD88A-201ENST00000408314 ITGAEP38570 1179 aa13.8□□□□□ -0.2
SNORD88A-201ENST00000408314 TMEM2Q9UHN6 1383 aa13.8□□□□□ -0.2
SNORD88A-201ENST00000408314 SYNMO15061 1565 aa13.79□□□□□ -0.2
SNORD88A-201ENST00000408314 IQGAP3Q86VI3 1631 aa13.79□□□□□ -0.2
SNORD88A-201ENST00000408314 TXNDC2Q86VQ3 553 aa13.79□□□□□ -0.2
SNORD88A-201ENST00000408314 PPARGC1BQ86YN6 1023 aaKnown RBP13.78□□□□□ -0.2
SNORD88A-201ENST00000408314 UBAP1LF5GYI3 381 aa13.77□□□□□ -0.21
SNORD88A-201ENST00000408314 HDGFP51858 240 aaKnown RBP13.77□□□□□ -0.21
SNORD88A-201ENST00000408314 IDI1Q13907 227 aa13.77□□□□□ -0.21
SNORD88A-201ENST00000408314 NUP155O75694 1391 aa13.76□□□□□ -0.21
SNORD88A-201ENST00000408314 TOM1O60784 492 aa13.76□□□□□ -0.21
SNORD88A-201ENST00000408314 E9PCH4 1651 aa13.73□□□□□ -0.21
SNORD88A-201ENST00000408314 LTKP29376 864 aa13.73□□□□□ -0.21
SNORD88A-201ENST00000408314 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.71□□□□□ -0.21
SNORD88A-201ENST00000408314 PPP1R15AO75807 674 aaPredicted RBP13.7□□□□□ -0.22
SNORD88A-201ENST00000408314 HFM1A2PYH4 1435 aa13.7□□□□□ -0.22
SNORD88A-201ENST00000408314 LRRC7Q96NW7 1537 aa13.69□□□□□ -0.22
SNORD88A-201ENST00000408314 TMEM131LA2VDJ0 1609 aa13.69□□□□□ -0.22
SNORD88A-201ENST00000408314 NAIPQ13075 1403 aa13.69□□□□□ -0.22
SNORD88A-201ENST00000408314 PLEKHG1Q9ULL1 1385 aa13.69□□□□□ -0.22
SNORD88A-201ENST00000408314 ZFYVE9O95405 1425 aa13.68□□□□□ -0.22
SNORD88A-201ENST00000408314 RIMS2Q9UQ26 1411 aa13.68□□□□□ -0.22
SNORD88A-201ENST00000408314 BCANQ96GW7 911 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms