RNA–Protein interactions for RNA: ENST00000407583.7

GPN1-202, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best) BASIC

Gene GPN1, Length 1,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-202ENST00000407583 CDK12Q9NYV4 1490 aaPredicted RBP14.11□□□□□ -0.15
GPN1-202ENST00000407583 ZRANB1Q9UGI0 708 aa14.1□□□□□ -0.15
GPN1-202ENST00000407583 JCADQ9P266 1359 aa14.1□□□□□ -0.15
GPN1-202ENST00000407583 PLXNC1O60486 1568 aa14.1□□□□□ -0.15
GPN1-202ENST00000407583 FBXO31Q5XUX0 539 aaPredicted RBP14.09□□□□□ -0.15
GPN1-202ENST00000407583 CDC42BPBQ9Y5S2 1711 aa14.08□□□□□ -0.16
GPN1-202ENST00000407583 THEMISQ8N1K5 641 aaPredicted RBP14.08□□□□□ -0.16
GPN1-202ENST00000407583 SAMD9LQ8IVG5 1584 aa14.07□□□□□ -0.16
GPN1-202ENST00000407583 UGGT1Q9NYU2 1555 aa14.07□□□□□ -0.16
GPN1-202ENST00000407583 MEX3CQ5U5Q3 659 aaKnown RBP14.07□□□□□ -0.16
GPN1-202ENST00000407583 RBM33Q96EV2 1170 aaKnown RBP14.07□□□□□ -0.16
GPN1-202ENST00000407583 FAM135AQ9P2D6 1515 aa14.06□□□□□ -0.16
GPN1-202ENST00000407583 RGS12O14924 1447 aa14.05□□□□□ -0.16
GPN1-202ENST00000407583 ZC3H13Q5T200 1668 aaKnown RBP14.05□□□□□ -0.16
GPN1-202ENST00000407583 A2MP01023 1474 aa14.04□□□□□ -0.16
GPN1-202ENST00000407583 IFFO2Q5TF58 517 aa14.04□□□□□ -0.16
GPN1-202ENST00000407583 PHLPP1O60346 1717 aa14.04□□□□□ -0.16
GPN1-202ENST00000407583 TROQ12816 1431 aaPredicted RBP14.02□□□□□ -0.16
GPN1-202ENST00000407583 PREX2Q70Z35 1606 aa14.02□□□□□ -0.17
GPN1-202ENST00000407583 SPAG9O60271 1321 aaKnown RBP14.02□□□□□ -0.17
GPN1-202ENST00000407583 KDM5DQ9BY66 1539 aa14.02□□□□□ -0.17
GPN1-202ENST00000407583 PIAS4Q8N2W9 510 aaPredicted RBP14.01□□□□□ -0.17
GPN1-202ENST00000407583 PZPP20742 1482 aa14.01□□□□□ -0.17
GPN1-202ENST00000407583 NLRP1Q9C000 1473 aa14.01□□□□□ -0.17
GPN1-202ENST00000407583 ATP7AQ04656 1500 aa14□□□□□ -0.17
GPN1-202ENST00000407583 SPATA31A6Q5VVP1 1343 aa14□□□□□ -0.17
GPN1-202ENST00000407583 TMEM94Q12767 1356 aa14□□□□□ -0.17
GPN1-202ENST00000407583 LRRC9Q6ZRR7 1453 aa13.99□□□□□ -0.17
GPN1-202ENST00000407583 NUTM2BA6NNL0 878 aaPredicted RBP13.99□□□□□ -0.17
GPN1-202ENST00000407583 NUTM2EB1AL46 878 aaPredicted RBP13.99□□□□□ -0.17
GPN1-202ENST00000407583 NUTM2DQ5VT03 806 aaPredicted RBP13.99□□□□□ -0.17
GPN1-202ENST00000407583 NUTM2AQ8IVF1 878 aaPredicted RBP13.99□□□□□ -0.17
GPN1-202ENST00000407583 COL16A1Q07092 1604 aaPredicted RBP13.99□□□□□ -0.17
GPN1-202ENST00000407583 MIA2Q96PC5 1412 aa13.99□□□□□ -0.17
GPN1-202ENST00000407583 MAP3K1Q13233 1512 aa13.99□□□□□ -0.17
GPN1-202ENST00000407583 CDK11AQ9UQ88 783 aaPredicted RBP13.98□□□□□ -0.17
GPN1-202ENST00000407583 CLIP1P30622 1438 aa13.98□□□□□ -0.17
GPN1-202ENST00000407583 ATP1B4Q9UN42 357 aaPredicted RBP13.97□□□□□ -0.17
GPN1-202ENST00000407583 SYCP2Q9BX26 1530 aa13.97□□□□□ -0.17
GPN1-202ENST00000407583 INO80Q9ULG1 1556 aaPredicted RBP13.96□□□□□ -0.17
GPN1-202ENST00000407583 EP400Q96L91 3159 aa13.96□□□□□ -0.17
GPN1-202ENST00000407583 FGD6Q6ZV73 1430 aa13.95□□□□□ -0.18
GPN1-202ENST00000407583 ATAD2Q6PL18 1390 aa13.94□□□□□ -0.18
GPN1-202ENST00000407583 AFF2P51816 1311 aa13.94□□□□□ -0.18
GPN1-202ENST00000407583 SCAF11Q99590 1463 aaKnown RBP13.93□□□□□ -0.18
GPN1-202ENST00000407583 LRP5O75197 1615 aa13.93□□□□□ -0.18
GPN1-202ENST00000407583 HNRNPMP52272 730 aaKnown RBP eCLIP13.92□□□□□ -0.18
GPN1-202ENST00000407583 ZNF777Q9ULD5 760 aaPredicted RBP13.91□□□□□ -0.18
GPN1-202ENST00000407583 RBM6P78332 1123 aaKnown RBP13.9□□□□□ -0.18
GPN1-202ENST00000407583 SLAIN2Q9P270 581 aa13.9□□□□□ -0.18
GPN1-202ENST00000407583 SHPRHQ149N8 1683 aa13.9□□□□□ -0.18
GPN1-202ENST00000407583 LTKP29376 864 aa13.89□□□□□ -0.19
GPN1-202ENST00000407583 ZEB1P37275 1124 aaPredicted RBP13.88□□□□□ -0.19
GPN1-202ENST00000407583 PCGF6Q9BYE7 350 aa13.88□□□□□ -0.19
GPN1-202ENST00000407583 CDC42BPAQ5VT25 1732 aa13.87□□□□□ -0.19
GPN1-202ENST00000407583 ADGBQ8N7X0 1667 aa13.87□□□□□ -0.19
GPN1-202ENST00000407583 TIAM1Q13009 1591 aa13.86□□□□□ -0.19
GPN1-202ENST00000407583 PROSER2Q86WR7 435 aaPredicted RBP13.86□□□□□ -0.19
GPN1-202ENST00000407583 QTRT2Q9H974 415 aaKnown RBP13.86□□□□□ -0.19
GPN1-202ENST00000407583 TRIM26Q12899 539 aaPredicted RBP13.85□□□□□ -0.19
GPN1-202ENST00000407583 MSH6P52701 1360 aa13.85□□□□□ -0.19
GPN1-202ENST00000407583 WASHC2CQ9Y4E1 1318 aa13.85□□□□□ -0.19
GPN1-202ENST00000407583 PRDM15P57071 1507 aaPredicted RBP13.85□□□□□ -0.19
GPN1-202ENST00000407583 TXNDC2Q86VQ3 553 aa13.84□□□□□ -0.19
GPN1-202ENST00000407583 YY1P25490 414 aa13.83□□□□□ -0.19
GPN1-202ENST00000407583 NCOA2Q15596 1464 aa13.83□□□□□ -0.19
GPN1-202ENST00000407583 ARHGAP23Q9P227 1491 aa13.83□□□□□ -0.19
GPN1-202ENST00000407583 KCNA6P17658 529 aa13.83□□□□□ -0.2
GPN1-202ENST00000407583 UBR1Q8IWV7 1749 aa13.82□□□□□ -0.2
GPN1-202ENST00000407583 LRRIQ1Q96JM4 1722 aa13.82□□□□□ -0.2
GPN1-202ENST00000407583 FMN1Q68DA7 1419 aa13.82□□□□□ -0.2
GPN1-202ENST00000407583 KIF3BO15066 747 aa13.82□□□□□ -0.2
GPN1-202ENST00000407583 AHDC1Q5TGY3 1603 aaPredicted RBP13.82□□□□□ -0.2
GPN1-202ENST00000407583 SLIT1O75093 1534 aa13.82□□□□□ -0.2
GPN1-202ENST00000407583 KIAA1107Q9UPP5 1409 aa13.81□□□□□ -0.2
GPN1-202ENST00000407583 DIP2AQ14689 1571 aa13.81□□□□□ -0.2
GPN1-202ENST00000407583 DHX29Q7Z478 1369 aaKnown RBP13.81□□□□□ -0.2
GPN1-202ENST00000407583 C8orf37Q96NL8 207 aa13.81□□□□□ -0.2
GPN1-202ENST00000407583 CSRNP3Q8WYN3 585 aa13.8□□□□□ -0.2
GPN1-202ENST00000407583 NWD1Q149M9 1564 aa13.79□□□□□ -0.2
GPN1-202ENST00000407583 NKTRP30414 1462 aaKnown RBP13.79□□□□□ -0.2
GPN1-202ENST00000407583 ABCC3O15438 1527 aa13.78□□□□□ -0.2
GPN1-202ENST00000407583 CCDC125Q86Z20 511 aa13.78□□□□□ -0.2
GPN1-202ENST00000407583 NGLY1Q96IV0 654 aa13.78□□□□□ -0.2
GPN1-202ENST00000407583 ERVK-7P63135 1459 aa13.78□□□□□ -0.2
GPN1-202ENST00000407583 GPATCH8Q9UKJ3 1502 aaKnown RBP13.78□□□□□ -0.2
GPN1-202ENST00000407583 NHSL1Q5SYE7 1610 aa13.77□□□□□ -0.2
GPN1-202ENST00000407583 KDM5AP29375 1690 aaKnown RBP13.76□□□□□ -0.21
GPN1-202ENST00000407583 PLEKHH2Q8IVE3 1493 aa13.75□□□□□ -0.21
GPN1-202ENST00000407583 EID1Q9Y6B2 187 aa13.75□□□□□ -0.21
GPN1-202ENST00000407583 SLC26A8Q96RN1 970 aa13.74□□□□□ -0.21
GPN1-202ENST00000407583 DEFB132Q7Z7B7 95 aa13.72□□□□□ -0.21
GPN1-202ENST00000407583 SENP3-EIF4A1A0A087X0R7 540 aa13.71□□□□□ -0.21
GPN1-202ENST00000407583 PSDA5PKW4 1024 aaPredicted RBP13.71□□□□□ -0.21
GPN1-202ENST00000407583 MAST1Q9Y2H9 1570 aa13.71□□□□□ -0.21
GPN1-202ENST00000407583 TET3O43151 1660 aa13.71□□□□□ -0.22
GPN1-202ENST00000407583 RTEL1-TNFRSF6BF6WH68 1400 aa13.71□□□□□ -0.22
GPN1-202ENST00000407583 BCL9LQ86UU0 1499 aa13.7□□□□□ -0.22
GPN1-202ENST00000407583 ARHGAP35Q9NRY4 1499 aa13.7□□□□□ -0.22
GPN1-202ENST00000407583 TMEM2Q9UHN6 1383 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms