RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 KDM5DQ9BY66 1539 aa15.79■□□□□ 0.12
TSPAN9-202ENST00000407263 PTPRKQ15262 1439 aa15.79■□□□□ 0.12
TSPAN9-202ENST00000407263 CAMSAP1Q5T5Y3 1602 aa15.79■□□□□ 0.12
TSPAN9-202ENST00000407263 PRDM15P57071 1507 aaPredicted RBP15.78■□□□□ 0.12
TSPAN9-202ENST00000407263 ERBINQ96RT1 1412 aa15.77■□□□□ 0.12
TSPAN9-202ENST00000407263 ANKRD30AQ9BXX3 1397 aa15.77■□□□□ 0.12
TSPAN9-202ENST00000407263 ITGAEP38570 1179 aa15.77■□□□□ 0.12
TSPAN9-202ENST00000407263 GGT6Q6P531 493 aa15.76■□□□□ 0.11
TSPAN9-202ENST00000407263 FAM135AQ9P2D6 1515 aa15.75■□□□□ 0.11
TSPAN9-202ENST00000407263 KIF3BO15066 747 aa15.75■□□□□ 0.11
TSPAN9-202ENST00000407263 RRP7BPQ9NSQ0 103 aa15.75■□□□□ 0.11
TSPAN9-202ENST00000407263 NCOA1Q15788 1441 aa15.75■□□□□ 0.11
TSPAN9-202ENST00000407263 CNTLNQ9NXG0 1405 aa15.75■□□□□ 0.11
TSPAN9-202ENST00000407263 MYO3AQ8NEV4 1616 aa15.75■□□□□ 0.11
TSPAN9-202ENST00000407263 CFAP65Q6ZU64 1925 aaKnown RBP15.74■□□□□ 0.11
TSPAN9-202ENST00000407263 ABCC3O15438 1527 aa15.74■□□□□ 0.11
TSPAN9-202ENST00000407263 ESF1Q9H501 851 aaKnown RBP15.74■□□□□ 0.11
TSPAN9-202ENST00000407263 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.74■□□□□ 0.11
TSPAN9-202ENST00000407263 UNC13BO14795 1591 aa15.73■□□□□ 0.11
TSPAN9-202ENST00000407263 CEBPAP49715 358 aaPredicted RBP15.71■□□□□ 0.11
TSPAN9-202ENST00000407263 ZNF142P52746 1687 aaPredicted RBP15.7■□□□□ 0.1
TSPAN9-202ENST00000407263 LMTK3Q96Q04 1460 aa15.69■□□□□ 0.1
TSPAN9-202ENST00000407263 ANKRD50Q9ULJ7 1429 aa15.68■□□□□ 0.1
TSPAN9-202ENST00000407263 ROCK1Q13464 1354 aa15.68■□□□□ 0.1
TSPAN9-202ENST00000407263 SETD1BQ9UPS6 1966 aaKnown RBP15.67■□□□□ 0.1
TSPAN9-202ENST00000407263 VWDEQ8N2E2 1590 aa15.67■□□□□ 0.1
TSPAN9-202ENST00000407263 IQGAP3Q86VI3 1631 aa15.66■□□□□ 0.1
TSPAN9-202ENST00000407263 TET3O43151 1660 aa15.66■□□□□ 0.1
TSPAN9-202ENST00000407263 PZPP20742 1482 aa15.65■□□□□ 0.1
TSPAN9-202ENST00000407263 ZMYM3Q14202 1370 aa15.65■□□□□ 0.1
TSPAN9-202ENST00000407263 EFCAB6Q5THR3 1501 aa15.64■□□□□ 0.09
TSPAN9-202ENST00000407263 CEP170BQ9Y4F5 1589 aaPredicted RBP15.63■□□□□ 0.09
TSPAN9-202ENST00000407263 UHRF1BP1Q6BDS2 1440 aa15.63■□□□□ 0.09
TSPAN9-202ENST00000407263 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.63■□□□□ 0.09
TSPAN9-202ENST00000407263 WASHC2CQ9Y4E1 1318 aa15.63■□□□□ 0.09
TSPAN9-202ENST00000407263 NPATQ14207 1427 aa15.62■□□□□ 0.09
TSPAN9-202ENST00000407263 E9PCH4 1651 aa15.62■□□□□ 0.09
TSPAN9-202ENST00000407263 SPATA31D1Q6ZQQ2 1576 aa15.62■□□□□ 0.09
TSPAN9-202ENST00000407263 KANK1Q14678 1352 aa15.62■□□□□ 0.09
TSPAN9-202ENST00000407263 LMTK2Q8IWU2 1503 aa15.61■□□□□ 0.09
TSPAN9-202ENST00000407263 ERVK-7P63135 1459 aa15.6■□□□□ 0.09
TSPAN9-202ENST00000407263 PPP6R1Q9UPN7 881 aa15.6■□□□□ 0.09
TSPAN9-202ENST00000407263 NAIPQ13075 1403 aa15.6■□□□□ 0.09
TSPAN9-202ENST00000407263 POLR1AO95602 1720 aaPredicted RBP15.58■□□□□ 0.08
TSPAN9-202ENST00000407263 HFM1A2PYH4 1435 aa15.58■□□□□ 0.08
TSPAN9-202ENST00000407263 STRCQ7RTU9 1775 aa15.57■□□□□ 0.08
TSPAN9-202ENST00000407263 SYNMO15061 1565 aa15.57■□□□□ 0.08
TSPAN9-202ENST00000407263 SPHKAPQ2M3C7 1700 aa15.57■□□□□ 0.08
TSPAN9-202ENST00000407263 MYO5BQ9ULV0 1848 aa15.57■□□□□ 0.08
TSPAN9-202ENST00000407263 HSPA2P54652 639 aa15.56■□□□□ 0.08
TSPAN9-202ENST00000407263 TNRQ92752 1358 aa15.56■□□□□ 0.08
TSPAN9-202ENST00000407263 PIK3C2BO00750 1634 aa15.56■□□□□ 0.08
TSPAN9-202ENST00000407263 UBR1Q8IWV7 1749 aa15.56■□□□□ 0.08
TSPAN9-202ENST00000407263 FBXO31Q5XUX0 539 aaPredicted RBP15.54■□□□□ 0.08
TSPAN9-202ENST00000407263 A2ML1A8K2U0 1454 aa15.52■□□□□ 0.08
TSPAN9-202ENST00000407263 ARHGAP31Q2M1Z3 1444 aa15.52■□□□□ 0.08
TSPAN9-202ENST00000407263 NLRP1Q9C000 1473 aa15.51■□□□□ 0.07
TSPAN9-202ENST00000407263 NUP155O75694 1391 aa15.5■□□□□ 0.07
TSPAN9-202ENST00000407263 UGGT1Q9NYU2 1555 aa15.5■□□□□ 0.07
TSPAN9-202ENST00000407263 RPRD2Q5VT52 1461 aaKnown RBP15.5■□□□□ 0.07
TSPAN9-202ENST00000407263 ADGRB3O60242 1522 aa15.48■□□□□ 0.07
TSPAN9-202ENST00000407263 KDM5AP29375 1690 aaKnown RBP15.48■□□□□ 0.07
TSPAN9-202ENST00000407263 NOS1P29475 1434 aa15.46■□□□□ 0.07
TSPAN9-202ENST00000407263 NEURL4Q96JN8 1562 aa15.45■□□□□ 0.06
TSPAN9-202ENST00000407263 PLA2R1Q13018 1463 aa15.45■□□□□ 0.06
TSPAN9-202ENST00000407263 CLTCL1P53675 1640 aa15.44■□□□□ 0.06
TSPAN9-202ENST00000407263 KIF1BO60333 1816 aa15.44■□□□□ 0.06
TSPAN9-202ENST00000407263 TMEM131LA2VDJ0 1609 aa15.43■□□□□ 0.06
TSPAN9-202ENST00000407263 SETD5Q9C0A6 1442 aa15.43■□□□□ 0.06
TSPAN9-202ENST00000407263 IQGAP1P46940 1657 aa15.42■□□□□ 0.06
TSPAN9-202ENST00000407263 TRIM52Q96A61 297 aa15.42■□□□□ 0.06
TSPAN9-202ENST00000407263 TRPM2O94759 1503 aa15.42■□□□□ 0.06
TSPAN9-202ENST00000407263 RAB3GAP2Q9H2M9 1393 aa15.41■□□□□ 0.06
TSPAN9-202ENST00000407263 SLIT1O75093 1534 aa15.37■□□□□ 0.05
TSPAN9-202ENST00000407263 NCKAP5LQ9HCH0 1330 aa15.36■□□□□ 0.05
TSPAN9-202ENST00000407263 ARHGAP23Q9P227 1491 aa15.35■□□□□ 0.05
TSPAN9-202ENST00000407263 SCAF11Q99590 1463 aaKnown RBP15.34■□□□□ 0.05
TSPAN9-202ENST00000407263 SLC4A1APQ9BWU0 796 aaKnown RBP15.34■□□□□ 0.05
TSPAN9-202ENST00000407263 PKD2Q13563 968 aa15.33■□□□□ 0.04
TSPAN9-202ENST00000407263 IDI1Q13907 227 aa15.33■□□□□ 0.04
TSPAN9-202ENST00000407263 STAG3Q9UJ98 1225 aa15.33■□□□□ 0.04
TSPAN9-202ENST00000407263 PTPRTO14522 1441 aa15.33■□□□□ 0.04
TSPAN9-202ENST00000407263 THEMISQ8N1K5 641 aaPredicted RBP15.32■□□□□ 0.04
TSPAN9-202ENST00000407263 FOXD1Q16676 465 aa15.31■□□□□ 0.04
TSPAN9-202ENST00000407263 NPHP4O75161 1426 aaPredicted RBP15.31■□□□□ 0.04
TSPAN9-202ENST00000407263 STRCP1A6NGW2 1772 aa15.31■□□□□ 0.04
TSPAN9-202ENST00000407263 PPLO60437 1756 aa15.31■□□□□ 0.04
TSPAN9-202ENST00000407263 CHGAP10645 457 aaKnown RBP15.3■□□□□ 0.04
TSPAN9-202ENST00000407263 IFT172Q9UG01 1749 aa15.3■□□□□ 0.04
TSPAN9-202ENST00000407263 TMEM2Q9UHN6 1383 aa15.3■□□□□ 0.04
TSPAN9-202ENST00000407263 MED14O60244 1454 aa15.29■□□□□ 0.04
TSPAN9-202ENST00000407263 SLC52A1Q9NWF4 448 aa15.29■□□□□ 0.04
TSPAN9-202ENST00000407263 MPHOSPH9Q99550 1183 aa15.28■□□□□ 0.04
TSPAN9-202ENST00000407263 NEXMIFQ5QGS0 1516 aa15.27■□□□□ 0.04
TSPAN9-202ENST00000407263 ZFYVE9O95405 1425 aa15.27■□□□□ 0.04
TSPAN9-202ENST00000407263 RIMS2Q9UQ26 1411 aa15.27■□□□□ 0.04
TSPAN9-202ENST00000407263 ANKLE2Q86XL3 938 aa15.27■□□□□ 0.04
TSPAN9-202ENST00000407263 LTBP4Q8N2S1 1624 aa15.26■□□□□ 0.03
TSPAN9-202ENST00000407263 DMRT2Q9Y5R5 561 aa15.26■□□□□ 0.03
TSPAN9-202ENST00000407263 SENP3Q9H4L4 574 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms