RNA–Protein interactions for RNA: ENST00000406848.1

GAPDHP42-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 42, humanhuman

BASIC

Gene GAPDHP42, Length 981 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP42-201ENST00000406848 FBXO22Q8NEZ5 403 aa9.17□□□□□ -0.94
GAPDHP42-201ENST00000406848 OTUD5Q96G74 571 aa9.17□□□□□ -0.94
GAPDHP42-201ENST00000406848 EFCAB5A4FU69 1503 aa9.15□□□□□ -0.94
GAPDHP42-201ENST00000406848 NLRP6P59044 892 aa9.15□□□□□ -0.94
GAPDHP42-201ENST00000406848 MAPKBP1O60336 1514 aa9.15□□□□□ -0.95
GAPDHP42-201ENST00000406848 ABCC2Q92887 1545 aa9.15□□□□□ -0.95
GAPDHP42-201ENST00000406848 PAXIP1Q6ZW49 1069 aaPredicted RBP9.14□□□□□ -0.95
GAPDHP42-201ENST00000406848 SAMD9Q5K651 1589 aa9.13□□□□□ -0.95
GAPDHP42-201ENST00000406848 KDM5BQ9UGL1 1544 aa9.12□□□□□ -0.95
GAPDHP42-201ENST00000406848 PLB1Q6P1J6 1458 aa9.12□□□□□ -0.95
GAPDHP42-201ENST00000406848 ADCY10Q96PN6 1610 aa9.12□□□□□ -0.95
GAPDHP42-201ENST00000406848 L3MBTL3Q96JM7 780 aaPredicted RBP9.1□□□□□ -0.95
GAPDHP42-201ENST00000406848 CFAP44Q96MT7 982 aa9.1□□□□□ -0.95
GAPDHP42-201ENST00000406848 SCUBE2Q9NQ36 999 aa9.1□□□□□ -0.95
GAPDHP42-201ENST00000406848 FMN1Q68DA7 1419 aa9.1□□□□□ -0.95
GAPDHP42-201ENST00000406848 ABCA8O94911 1581 aa9.1□□□□□ -0.95
GAPDHP42-201ENST00000406848 ABCC10Q5T3U5 1492 aa9.09□□□□□ -0.95
GAPDHP42-201ENST00000406848 MAMSTRQ6ZN01 415 aa9.09□□□□□ -0.95
GAPDHP42-201ENST00000406848 BOLA1Q9Y3E2 137 aa9.09□□□□□ -0.95
GAPDHP42-201ENST00000406848 PPP1R37O75864 691 aa9.08□□□□□ -0.96
GAPDHP42-201ENST00000406848 TTBK1Q5TCY1 1321 aaPredicted RBP9.07□□□□□ -0.96
GAPDHP42-201ENST00000406848 P3H3Q8IVL6 736 aa9.06□□□□□ -0.96
GAPDHP42-201ENST00000406848 MICALL2Q8IY33 904 aa9.06□□□□□ -0.96
GAPDHP42-201ENST00000406848 ASXL2Q76L83 1435 aa9.05□□□□□ -0.96
GAPDHP42-201ENST00000406848 GLI2P10070 1586 aa9.05□□□□□ -0.96
GAPDHP42-201ENST00000406848 G3V3G9 751 aa9.05□□□□□ -0.96
GAPDHP42-201ENST00000406848 FAM69CQ0P6D2 419 aa9.05□□□□□ -0.96
GAPDHP42-201ENST00000406848 C3orf67Q6ZVT6 689 aa9.05□□□□□ -0.96
GAPDHP42-201ENST00000406848 TMEM121BQ9BXQ6 578 aaPredicted RBP9.05□□□□□ -0.96
GAPDHP42-201ENST00000406848 GTPBP6O43824 516 aaPredicted RBP9.04□□□□□ -0.96
GAPDHP42-201ENST00000406848 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.04□□□□□ -0.96
GAPDHP42-201ENST00000406848 CDK11AQ9UQ88 783 aaPredicted RBP9.04□□□□□ -0.96
GAPDHP42-201ENST00000406848 RAPGEF6Q8TEU7 1601 aa9.04□□□□□ -0.96
GAPDHP42-201ENST00000406848 FHOD3Q2V2M9 1422 aa9.04□□□□□ -0.96
GAPDHP42-201ENST00000406848 ARHGAP35Q9NRY4 1499 aa9.03□□□□□ -0.96
GAPDHP42-201ENST00000406848 SPRYD3Q8NCJ5 442 aa9.03□□□□□ -0.96
GAPDHP42-201ENST00000406848 SLAIN1Q8ND83 568 aa9.03□□□□□ -0.96
GAPDHP42-201ENST00000406848 TSHZ2Q9NRE2 1034 aa9.03□□□□□ -0.96
GAPDHP42-201ENST00000406848 ATP10BO94823 1461 aa9.02□□□□□ -0.96
GAPDHP42-201ENST00000406848 WDR7Q9Y4E6 1490 aa9.02□□□□□ -0.96
GAPDHP42-201ENST00000406848 ZCCHC11Q5TAX3 1644 aaKnown RBP9.02□□□□□ -0.96
GAPDHP42-201ENST00000406848 PLEKHD1A6NEE1 506 aa9.02□□□□□ -0.97
GAPDHP42-201ENST00000406848 CLIP1P30622 1438 aa9.02□□□□□ -0.97
GAPDHP42-201ENST00000406848 DIP2BQ9P265 1576 aa9.02□□□□□ -0.97
GAPDHP42-201ENST00000406848 EPRSP07814 1512 aaKnown RBP9.01□□□□□ -0.97
GAPDHP42-201ENST00000406848 RANGAP1P46060 587 aaPredicted RBP9.01□□□□□ -0.97
GAPDHP42-201ENST00000406848 PHLDB1Q86UU1 1377 aa9□□□□□ -0.97
GAPDHP42-201ENST00000406848 TMEM92Q6UXU6 159 aa9□□□□□ -0.97
GAPDHP42-201ENST00000406848 NUP153P49790 1475 aaKnown RBP9□□□□□ -0.97
GAPDHP42-201ENST00000406848 TEX14Q8IWB6 1497 aa9□□□□□ -0.97
GAPDHP42-201ENST00000406848 CASKIN1Q8WXD9 1431 aa8.99□□□□□ -0.97
GAPDHP42-201ENST00000406848 KIF13AQ9H1H9 1805 aa8.99□□□□□ -0.97
GAPDHP42-201ENST00000406848 HECW1Q76N89 1606 aa8.98□□□□□ -0.97
GAPDHP42-201ENST00000406848 CCDC18Q5T9S5 1454 aa8.97□□□□□ -0.97
GAPDHP42-201ENST00000406848 RYDENQ9NUL5 291 aaKnown RBP8.97□□□□□ -0.97
GAPDHP42-201ENST00000406848 FYCO1Q9BQS8 1478 aa8.96□□□□□ -0.97
GAPDHP42-201ENST00000406848 MAGI3Q5TCQ9 1506 aa8.96□□□□□ -0.97
GAPDHP42-201ENST00000406848 CEP162Q5TB80 1403 aa8.96□□□□□ -0.98
GAPDHP42-201ENST00000406848 CD109Q6YHK3 1445 aa8.96□□□□□ -0.98
GAPDHP42-201ENST00000406848 CFAP43Q8NDM7 1665 aa8.95□□□□□ -0.98
GAPDHP42-201ENST00000406848 KCNH8Q96L42 1107 aa8.95□□□□□ -0.98
GAPDHP42-201ENST00000406848 MAP3K4Q9Y6R4 1608 aa8.94□□□□□ -0.98
GAPDHP42-201ENST00000406848 ATP1B4Q9UN42 357 aaPredicted RBP8.93□□□□□ -0.98
GAPDHP42-201ENST00000406848 ABCA9Q8IUA7 1624 aa8.93□□□□□ -0.98
GAPDHP42-201ENST00000406848 TROQ12816 1431 aaPredicted RBP8.92□□□□□ -0.98
GAPDHP42-201ENST00000406848 LOC105371045A0A1W2PR82 267 aa8.92□□□□□ -0.98
GAPDHP42-201ENST00000406848 ARAP3Q8WWN8 1544 aa8.9□□□□□ -0.98
GAPDHP42-201ENST00000406848 NEO1Q92859 1461 aa8.9□□□□□ -0.98
GAPDHP42-201ENST00000406848 C2orf72A6NCS6 295 aa8.9□□□□□ -0.98
GAPDHP42-201ENST00000406848 ARID3CA6NKF2 412 aa8.9□□□□□ -0.98
GAPDHP42-201ENST00000406848 NBR1Q14596 966 aa8.9□□□□□ -0.98
GAPDHP42-201ENST00000406848 TIMELESSQ9UNS1 1208 aa8.89□□□□□ -0.99
GAPDHP42-201ENST00000406848 KDM6BO15054 1643 aa8.89□□□□□ -0.99
GAPDHP42-201ENST00000406848 VPS8Q8N3P4 1428 aa8.88□□□□□ -0.99
GAPDHP42-201ENST00000406848 PCF11O94913 1555 aaKnown RBP8.88□□□□□ -0.99
GAPDHP42-201ENST00000406848 KIF3CO14782 793 aa8.88□□□□□ -0.99
GAPDHP42-201ENST00000406848 EFCAB2Q5VUJ9 269 aa8.88□□□□□ -0.99
GAPDHP42-201ENST00000406848 FAM163AQ96GL9 167 aaPredicted RBP8.88□□□□□ -0.99
GAPDHP42-201ENST00000406848 MAP3K1Q13233 1512 aa8.88□□□□□ -0.99
GAPDHP42-201ENST00000406848 CDK13Q14004 1512 aaKnown RBP8.88□□□□□ -0.99
GAPDHP42-201ENST00000406848 PLCH2O75038 1416 aa8.88□□□□□ -0.99
GAPDHP42-201ENST00000406848 PPRC1Q5VV67 1664 aaKnown RBP8.88□□□□□ -0.99
GAPDHP42-201ENST00000406848 TSPOAP1O95153 1857 aa8.87□□□□□ -0.99
GAPDHP42-201ENST00000406848 CFAP74Q9C0B2 1584 aa8.87□□□□□ -0.99
GAPDHP42-201ENST00000406848 LCE2DQ5TA82 110 aaPredicted RBP8.87□□□□□ -0.99
GAPDHP42-201ENST00000406848 CADPS2Q86UW7 1296 aa8.87□□□□□ -0.99
GAPDHP42-201ENST00000406848 KIF14Q15058 1648 aa8.87□□□□□ -0.99
GAPDHP42-201ENST00000406848 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.86□□□□□ -0.99
GAPDHP42-201ENST00000406848 TMC2Q8TDI7 906 aa8.86□□□□□ -0.99
GAPDHP42-201ENST00000406848 MTUS2Q5JR59 1369 aa8.86□□□□□ -0.99
GAPDHP42-201ENST00000406848 HOXB3P14651 431 aaPredicted RBP8.85□□□□□ -0.99
GAPDHP42-201ENST00000406848 NCKAP5LQ9HCH0 1330 aa8.84□□□□□ -0.99
GAPDHP42-201ENST00000406848 FANCAO15360 1455 aa8.84□□□□□ -0.99
GAPDHP42-201ENST00000406848 AKNAQ7Z591 1439 aa8.84□□□□□ -0.99
GAPDHP42-201ENST00000406848 TULP1O00294 542 aaPredicted RBP8.83□□□□□ -1
GAPDHP42-201ENST00000406848 SNPHO15079 494 aa8.83□□□□□ -1
GAPDHP42-201ENST00000406848 ST18O60284 1047 aa8.83□□□□□ -1
GAPDHP42-201ENST00000406848 EHBP1L1Q8N3D4 1523 aa8.82□□□□□ -1
GAPDHP42-201ENST00000406848 CRISPLD2Q9H0B8 497 aa8.82□□□□□ -1
GAPDHP42-201ENST00000406848 GPHNQ9NQX3 736 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms