RNA–Protein interactions for RNA: ENST00000406419.1

CRABP1-202, Transcript of cellular retinoic acid binding protein 1, humanhuman

TSL 5

Gene CRABP1, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRABP1-202ENST00000406419 FAM135AQ9P2D6 1515 aa19.68■□□□□ 0.74
CRABP1-202ENST00000406419 IQSEC2Q5JU85 1478 aa19.67■□□□□ 0.74
CRABP1-202ENST00000406419 TCOF1Q13428 1488 aaKnown RBP19.67■□□□□ 0.74
CRABP1-202ENST00000406419 MAP3K1Q13233 1512 aa19.66■□□□□ 0.74
CRABP1-202ENST00000406419 A2ML1A8K2U0 1454 aa19.66■□□□□ 0.74
CRABP1-202ENST00000406419 WASHC2CQ9Y4E1 1318 aa19.65■□□□□ 0.74
CRABP1-202ENST00000406419 KDM5DQ9BY66 1539 aa19.64■□□□□ 0.73
CRABP1-202ENST00000406419 PZPP20742 1482 aa19.63■□□□□ 0.73
CRABP1-202ENST00000406419 KANK4Q5T7N3 995 aaPredicted RBP19.63■□□□□ 0.73
CRABP1-202ENST00000406419 TNRQ92752 1358 aa19.62■□□□□ 0.73
CRABP1-202ENST00000406419 FBXO31Q5XUX0 539 aaPredicted RBP19.62■□□□□ 0.73
CRABP1-202ENST00000406419 MIA2Q96PC5 1412 aa19.61■□□□□ 0.73
CRABP1-202ENST00000406419 DNMT1P26358 1616 aaKnown RBP19.61■□□□□ 0.73
CRABP1-202ENST00000406419 ZNF335Q9H4Z2 1342 aaPredicted RBP19.6■□□□□ 0.73
CRABP1-202ENST00000406419 MAST1Q9Y2H9 1570 aa19.59■□□□□ 0.73
CRABP1-202ENST00000406419 MYOM3Q5VTT5 1437 aa19.59■□□□□ 0.73
CRABP1-202ENST00000406419 THEMISQ8N1K5 641 aaPredicted RBP19.55■□□□□ 0.72
CRABP1-202ENST00000406419 RNF17Q9BXT8 1623 aaKnown RBP19.54■□□□□ 0.72
CRABP1-202ENST00000406419 NLRP1Q9C000 1473 aa19.54■□□□□ 0.72
CRABP1-202ENST00000406419 EIF2AK4Q9P2K8 1649 aaKnown RBP19.52■□□□□ 0.72
CRABP1-202ENST00000406419 ANKLE2Q86XL3 938 aa19.52■□□□□ 0.72
CRABP1-202ENST00000406419 APLP2Q06481 763 aa19.51■□□□□ 0.71
CRABP1-202ENST00000406419 ABCC3O15438 1527 aa19.51■□□□□ 0.71
CRABP1-202ENST00000406419 ZC3H13Q5T200 1668 aaKnown RBP19.5■□□□□ 0.71
CRABP1-202ENST00000406419 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.5■□□□□ 0.71
CRABP1-202ENST00000406419 POLR1AO95602 1720 aaPredicted RBP19.5■□□□□ 0.71
CRABP1-202ENST00000406419 UGGT1Q9NYU2 1555 aa19.49■□□□□ 0.71
CRABP1-202ENST00000406419 UBAP1LF5GYI3 381 aa19.49■□□□□ 0.71
CRABP1-202ENST00000406419 DUOX2Q9NRD8 1548 aa19.49■□□□□ 0.71
CRABP1-202ENST00000406419 NEURL4Q96JN8 1562 aa19.49■□□□□ 0.71
CRABP1-202ENST00000406419 DISP3Q9P2K9 1392 aa19.48■□□□□ 0.71
CRABP1-202ENST00000406419 SPATA31D1Q6ZQQ2 1576 aa19.47■□□□□ 0.71
CRABP1-202ENST00000406419 MROH1Q8NDA8 1641 aa19.46■□□□□ 0.71
CRABP1-202ENST00000406419 MED14O60244 1454 aa19.46■□□□□ 0.71
CRABP1-202ENST00000406419 SHANK2Q9UPX8 1470 aa19.46■□□□□ 0.71
CRABP1-202ENST00000406419 ABCC5O15440 1437 aa19.45■□□□□ 0.7
CRABP1-202ENST00000406419 CPS1P31327 1500 aa19.45■□□□□ 0.7
CRABP1-202ENST00000406419 KIF15Q9NS87 1388 aa19.44■□□□□ 0.7
CRABP1-202ENST00000406419 DEPDC5O75140 1603 aa19.44■□□□□ 0.7
CRABP1-202ENST00000406419 ERVK-7P63135 1459 aa19.44■□□□□ 0.7
CRABP1-202ENST00000406419 PTPN23Q9H3S7 1636 aa19.43■□□□□ 0.7
CRABP1-202ENST00000406419 NPHP4O75161 1426 aaPredicted RBP19.42■□□□□ 0.7
CRABP1-202ENST00000406419 ERBINQ96RT1 1412 aa19.42■□□□□ 0.7
CRABP1-202ENST00000406419 RRP7BPQ9NSQ0 103 aa19.42■□□□□ 0.7
CRABP1-202ENST00000406419 ARHGAP31Q2M1Z3 1444 aa19.41■□□□□ 0.7
CRABP1-202ENST00000406419 FGD6Q6ZV73 1430 aa19.41■□□□□ 0.7
CRABP1-202ENST00000406419 CROCC2H7BZ55 1655 aa19.4■□□□□ 0.7
CRABP1-202ENST00000406419 DAPK1P53355 1430 aa19.4■□□□□ 0.7
CRABP1-202ENST00000406419 CEP152O94986 1710 aa19.39■□□□□ 0.7
CRABP1-202ENST00000406419 TOM1O60784 492 aa19.39■□□□□ 0.69
CRABP1-202ENST00000406419 PRDM15P57071 1507 aaPredicted RBP19.39■□□□□ 0.69
CRABP1-202ENST00000406419 VWDEQ8N2E2 1590 aa19.39■□□□□ 0.69
CRABP1-202ENST00000406419 CFAP65Q6ZU64 1925 aaKnown RBP19.39■□□□□ 0.69
CRABP1-202ENST00000406419 ILDR2Q71H61 639 aa19.38■□□□□ 0.69
CRABP1-202ENST00000406419 IQGAP1P46940 1657 aa19.36■□□□□ 0.69
CRABP1-202ENST00000406419 ANKRD30AQ9BXX3 1397 aa19.35■□□□□ 0.69
CRABP1-202ENST00000406419 KANK1Q14678 1352 aa19.34■□□□□ 0.69
CRABP1-202ENST00000406419 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.34■□□□□ 0.69
CRABP1-202ENST00000406419 UBR1Q8IWV7 1749 aa19.34■□□□□ 0.69
CRABP1-202ENST00000406419 CHIC2Q9UKJ5 165 aa19.33■□□□□ 0.68
CRABP1-202ENST00000406419 ARHGAP23Q9P227 1491 aa19.31■□□□□ 0.68
CRABP1-202ENST00000406419 SOCS7O14512 581 aa19.31■□□□□ 0.68
CRABP1-202ENST00000406419 PIP4K2BP78356 416 aa19.31■□□□□ 0.68
CRABP1-202ENST00000406419 SLIT1O75093 1534 aa19.3■□□□□ 0.68
CRABP1-202ENST00000406419 SCAF1Q9H7N4 1312 aaKnown RBP19.3■□□□□ 0.68
CRABP1-202ENST00000406419 SCAF11Q99590 1463 aaKnown RBP19.3■□□□□ 0.68
CRABP1-202ENST00000406419 LTKP29376 864 aa19.3■□□□□ 0.68
CRABP1-202ENST00000406419 TXNDC2Q86VQ3 553 aa19.3■□□□□ 0.68
CRABP1-202ENST00000406419 LMTK2Q8IWU2 1503 aa19.3■□□□□ 0.68
CRABP1-202ENST00000406419 HSPA1LP34931 641 aa19.28■□□□□ 0.68
CRABP1-202ENST00000406419 EID1Q9Y6B2 187 aa19.28■□□□□ 0.68
CRABP1-202ENST00000406419 LRRC7Q96NW7 1537 aa19.27■□□□□ 0.68
CRABP1-202ENST00000406419 ADGRL2O95490 1459 aa19.27■□□□□ 0.67
CRABP1-202ENST00000406419 STRCP1A6NGW2 1772 aa19.27■□□□□ 0.67
CRABP1-202ENST00000406419 TMEM2Q9UHN6 1383 aa19.25■□□□□ 0.67
CRABP1-202ENST00000406419 IDI1Q13907 227 aa19.25■□□□□ 0.67
CRABP1-202ENST00000406419 STAG3Q9UJ98 1225 aa19.25■□□□□ 0.67
CRABP1-202ENST00000406419 SYNMO15061 1565 aa19.24■□□□□ 0.67
CRABP1-202ENST00000406419 FAM50AQ14320 339 aaKnown RBP19.24■□□□□ 0.67
CRABP1-202ENST00000406419 PIK3C2BO00750 1634 aa19.24■□□□□ 0.67
CRABP1-202ENST00000406419 ALKQ9UM73 1620 aa19.23■□□□□ 0.67
CRABP1-202ENST00000406419 KDM5AP29375 1690 aaKnown RBP19.23■□□□□ 0.67
CRABP1-202ENST00000406419 NOS1P29475 1434 aa19.22■□□□□ 0.67
CRABP1-202ENST00000406419 EFCAB6Q5THR3 1501 aa19.2■□□□□ 0.66
CRABP1-202ENST00000406419 ANKRD50Q9ULJ7 1429 aa19.2■□□□□ 0.66
CRABP1-202ENST00000406419 SLC52A1Q9NWF4 448 aa19.2■□□□□ 0.66
CRABP1-202ENST00000406419 RPRD2Q5VT52 1461 aaKnown RBP19.17■□□□□ 0.66
CRABP1-202ENST00000406419 MED1Q15648 1581 aaPredicted RBP19.15■□□□□ 0.66
CRABP1-202ENST00000406419 KCNA6P17658 529 aa19.14■□□□□ 0.65
CRABP1-202ENST00000406419 ADGRB3O60242 1522 aa19.13■□□□□ 0.65
CRABP1-202ENST00000406419 TET3O43151 1660 aa19.13■□□□□ 0.65
CRABP1-202ENST00000406419 XIRP1Q702N8 1843 aaKnown RBP19.11■□□□□ 0.65
CRABP1-202ENST00000406419 ROCK1Q13464 1354 aa19.11■□□□□ 0.65
CRABP1-202ENST00000406419 SLC26A8Q96RN1 970 aa19.11■□□□□ 0.65
CRABP1-202ENST00000406419 HDGFP51858 240 aaKnown RBP19.09■□□□□ 0.65
CRABP1-202ENST00000406419 TMEM94Q12767 1356 aa19.08■□□□□ 0.65
CRABP1-202ENST00000406419 UNC13BO14795 1591 aa19.07■□□□□ 0.64
CRABP1-202ENST00000406419 PROSER2Q86WR7 435 aaPredicted RBP19.07■□□□□ 0.64
CRABP1-202ENST00000406419 GCC2Q8IWJ2 1684 aa19.07■□□□□ 0.64
CRABP1-202ENST00000406419 FAM135BQ49AJ0 1406 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms