RNA–Protein interactions for RNA: ENST00000406076.5

CLHC1-203, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLHC1, Length 1,777 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-203ENST00000406076 IGSF3O75054 1194 aa7.92□□□□□ -1.14
CLHC1-203ENST00000406076 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.92□□□□□ -1.14
CLHC1-203ENST00000406076 WDR62O43379 1518 aa7.91□□□□□ -1.14
CLHC1-203ENST00000406076 ZNF687Q8N1G0 1237 aa7.91□□□□□ -1.14
CLHC1-203ENST00000406076 ZNF316A6NFI3 1004 aaPredicted RBP7.89□□□□□ -1.15
CLHC1-203ENST00000406076 SLC34A2O95436 690 aa7.89□□□□□ -1.15
CLHC1-203ENST00000406076 PDIA4P13667 645 aaKnown RBP7.89□□□□□ -1.15
CLHC1-203ENST00000406076 NKX1-1Q15270 411 aaPredicted RBP7.89□□□□□ -1.15
CLHC1-203ENST00000406076 PDS5BQ9NTI5 1447 aa7.89□□□□□ -1.15
CLHC1-203ENST00000406076 MRC2Q9UBG0 1479 aa7.89□□□□□ -1.15
CLHC1-203ENST00000406076 NUDT7P0C024 238 aa7.88□□□□□ -1.15
CLHC1-203ENST00000406076 PCDHGA4Q9Y5G9 962 aa7.87□□□□□ -1.15
CLHC1-203ENST00000406076 ARAP1Q96P48 1450 aa7.86□□□□□ -1.15
CLHC1-203ENST00000406076 GPHNQ9NQX3 736 aaPredicted RBP7.84□□□□□ -1.15
CLHC1-203ENST00000406076 SMARCA4P51532 1647 aa7.84□□□□□ -1.15
CLHC1-203ENST00000406076 FOXK1P85037 733 aa7.84□□□□□ -1.15
CLHC1-203ENST00000406076 LHX6Q9UPM6 363 aa7.84□□□□□ -1.15
CLHC1-203ENST00000406076 BAZ1BQ9UIG0 1483 aaKnown RBP7.83□□□□□ -1.16
CLHC1-203ENST00000406076 ARID3CA6NKF2 412 aa7.82□□□□□ -1.16
CLHC1-203ENST00000406076 PLPP6Q8IY26 295 aa7.82□□□□□ -1.16
CLHC1-203ENST00000406076 SLC24A3Q9HC58 644 aa7.82□□□□□ -1.16
CLHC1-203ENST00000406076 DSG2Q14126 1118 aa7.82□□□□□ -1.16
CLHC1-203ENST00000406076 CADPSQ9ULU8 1353 aa7.81□□□□□ -1.16
CLHC1-203ENST00000406076 ANKRD13DQ6ZTN6 518 aa7.81□□□□□ -1.16
CLHC1-203ENST00000406076 RYDENQ9NUL5 291 aaKnown RBP7.81□□□□□ -1.16
CLHC1-203ENST00000406076 PTCD2Q8WV60 388 aaKnown RBP7.8□□□□□ -1.16
CLHC1-203ENST00000406076 GTPBP6O43824 516 aaPredicted RBP7.79□□□□□ -1.16
CLHC1-203ENST00000406076 ZC3H15Q8WU90 426 aaKnown RBP7.79□□□□□ -1.16
CLHC1-203ENST00000406076 KDM4FA0A1W2PPD8 638 aa7.79□□□□□ -1.16
CLHC1-203ENST00000406076 LSM11P83369 360 aaKnown RBP eCLIP7.79□□□□□ -1.16
CLHC1-203ENST00000406076 RNF166Q96A37 237 aaPredicted RBP7.79□□□□□ -1.16
CLHC1-203ENST00000406076 MYT1LQ9UL68 1186 aa7.79□□□□□ -1.16
CLHC1-203ENST00000406076 POTEEQ6S8J3 1075 aa7.78□□□□□ -1.16
CLHC1-203ENST00000406076 AXIN2Q9Y2T1 843 aa7.78□□□□□ -1.16
CLHC1-203ENST00000406076 ZNF608Q9ULD9 1512 aaPredicted RBP7.78□□□□□ -1.16
CLHC1-203ENST00000406076 CDK11BP21127 795 aaKnown RBP7.77□□□□□ -1.17
CLHC1-203ENST00000406076 CDK11AQ9UQ88 783 aaPredicted RBP7.77□□□□□ -1.17
CLHC1-203ENST00000406076 APBB1O00213 710 aa7.76□□□□□ -1.17
CLHC1-203ENST00000406076 PBX2P40425 430 aa7.76□□□□□ -1.17
CLHC1-203ENST00000406076 KCTD17Q8N5Z5 321 aa7.76□□□□□ -1.17
CLHC1-203ENST00000406076 URB2Q14146 1524 aaKnown RBP7.76□□□□□ -1.17
CLHC1-203ENST00000406076 P3H3Q8IVL6 736 aa7.76□□□□□ -1.17
CLHC1-203ENST00000406076 CRISPLD2Q9H0B8 497 aa7.76□□□□□ -1.17
CLHC1-203ENST00000406076 PEG3Q9GZU2 1588 aa7.76□□□□□ -1.17
CLHC1-203ENST00000406076 PTGER2P43116 358 aa7.74□□□□□ -1.17
CLHC1-203ENST00000406076 PSDA5PKW4 1024 aaPredicted RBP7.74□□□□□ -1.17
CLHC1-203ENST00000406076 RAD21O60216 631 aa7.74□□□□□ -1.17
CLHC1-203ENST00000406076 TBC1D12O60347 775 aa7.74□□□□□ -1.17
CLHC1-203ENST00000406076 NCKAP5LQ9HCH0 1330 aa7.73□□□□□ -1.17
CLHC1-203ENST00000406076 HMGB1P09429 215 aaKnown RBP7.73□□□□□ -1.17
CLHC1-203ENST00000406076 HSP90B1P14625 803 aaKnown RBP7.73□□□□□ -1.17
CLHC1-203ENST00000406076 CEP164Q9UPV0 1460 aa7.72□□□□□ -1.17
CLHC1-203ENST00000406076 PPP1R15BQ5SWA1 713 aa7.72□□□□□ -1.17
CLHC1-203ENST00000406076 RGS22Q8NE09 1264 aa7.72□□□□□ -1.17
CLHC1-203ENST00000406076 KCNV2Q8TDN2 545 aa7.72□□□□□ -1.17
CLHC1-203ENST00000406076 UPF1Q92900 1129 aaKnown RBP eCLIP7.72□□□□□ -1.17
CLHC1-203ENST00000406076 FANCD2Q9BXW9 1451 aa7.72□□□□□ -1.17
CLHC1-203ENST00000406076 OXER1Q8TDS5 423 aa7.71□□□□□ -1.17
CLHC1-203ENST00000406076 CHMP4AQ9BY43 222 aa7.71□□□□□ -1.17
CLHC1-203ENST00000406076 ARHGAP33O14559 1287 aa7.71□□□□□ -1.18
CLHC1-203ENST00000406076 MROH2BQ7Z745 1585 aa7.7□□□□□ -1.18
CLHC1-203ENST00000406076 PDE4AP27815 886 aa7.7□□□□□ -1.18
CLHC1-203ENST00000406076 PPP4R3BQ5MIZ7 849 aa7.69□□□□□ -1.18
CLHC1-203ENST00000406076 PSEN2P49810 448 aa7.69□□□□□ -1.18
CLHC1-203ENST00000406076 ZNF428Q96B54 188 aa7.69□□□□□ -1.18
CLHC1-203ENST00000406076 MTMR7Q9Y216 660 aa7.69□□□□□ -1.18
CLHC1-203ENST00000406076 ADGRD1Q6QNK2 874 aa7.68□□□□□ -1.18
CLHC1-203ENST00000406076 LARP6Q9BRS8 491 aaKnown RBP7.68□□□□□ -1.18
CLHC1-203ENST00000406076 DMRTA1Q5VZB9 504 aa7.67□□□□□ -1.18
CLHC1-203ENST00000406076 IL27Q8NEV9 243 aa7.67□□□□□ -1.18
CLHC1-203ENST00000406076 PUS7Q96PZ0 661 aaKnown RBP7.67□□□□□ -1.18
CLHC1-203ENST00000406076 CHD1O14646 1710 aa7.67□□□□□ -1.18
CLHC1-203ENST00000406076 DDX27Q96GQ7 796 aaKnown RBP7.66□□□□□ -1.18
CLHC1-203ENST00000406076 GPBP1L1Q9HC44 474 aaPredicted RBP7.66□□□□□ -1.18
CLHC1-203ENST00000406076 CCDC82Q8N4S0 544 aa7.65□□□□□ -1.18
CLHC1-203ENST00000406076 RSF1Q96T23 1441 aaPredicted RBP7.65□□□□□ -1.19
CLHC1-203ENST00000406076 ZNF454Q8N9F8 522 aa7.64□□□□□ -1.19
CLHC1-203ENST00000406076 FOXD4L5Q5VV16 416 aaPredicted RBP7.64□□□□□ -1.19
CLHC1-203ENST00000406076 CADPS2Q86UW7 1296 aa7.64□□□□□ -1.19
CLHC1-203ENST00000406076 FOXD4L4Q8WXT5 416 aaPredicted RBP7.64□□□□□ -1.19
CLHC1-203ENST00000406076 KCNK17Q96T54 332 aa7.64□□□□□ -1.19
CLHC1-203ENST00000406076 TK2O00142 265 aa7.63□□□□□ -1.19
CLHC1-203ENST00000406076 RBM25P49756 843 aaKnown RBP7.63□□□□□ -1.19
CLHC1-203ENST00000406076 MFSD10Q14728 455 aa7.63□□□□□ -1.19
CLHC1-203ENST00000406076 CFTRP13569 1480 aa7.62□□□□□ -1.19
CLHC1-203ENST00000406076 AQRO60306 1485 aaKnown RBP eCLIP7.62□□□□□ -1.19
CLHC1-203ENST00000406076 HRO43593 1189 aa7.61□□□□□ -1.19
CLHC1-203ENST00000406076 EVI5O60447 810 aa7.61□□□□□ -1.19
CLHC1-203ENST00000406076 ZMYND10O75800 440 aa7.61□□□□□ -1.19
CLHC1-203ENST00000406076 AEBP1Q8IUX7 1158 aa7.61□□□□□ -1.19
CLHC1-203ENST00000406076 TRAIPQ9BWF2 469 aa7.61□□□□□ -1.19
CLHC1-203ENST00000406076 FOSBP53539 338 aa7.61□□□□□ -1.19
CLHC1-203ENST00000406076 KCNH8Q96L42 1107 aa7.61□□□□□ -1.19
CLHC1-203ENST00000406076 ANO8Q9HCE9 1232 aaPredicted RBP7.61□□□□□ -1.19
CLHC1-203ENST00000406076 EIF4G3O43432 1585 aaKnown RBP7.61□□□□□ -1.19
CLHC1-203ENST00000406076 EMILIN3Q9NT22 766 aa7.6□□□□□ -1.19
CLHC1-203ENST00000406076 IFT140Q96RY7 1462 aa7.59□□□□□ -1.19
CLHC1-203ENST00000406076 MAP3K9P80192 1104 aa7.59□□□□□ -1.19
CLHC1-203ENST00000406076 BCL2L12Q9HB09 334 aa7.59□□□□□ -1.19
CLHC1-203ENST00000406076 JPH4Q96JJ6 628 aa7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms