RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 ADAMTS12P58397 1594 aa21.31■■□□□ 1
COL4A3BP-204ENST00000405807 PAXIP1Q6ZW49 1069 aaPredicted RBP21.31■■□□□ 1
COL4A3BP-204ENST00000405807 CFDP1Q9UEE9 299 aaPredicted RBP21.31■■□□□ 1
COL4A3BP-204ENST00000405807 RALGAPBQ86X10 1494 aa21.3■■□□□ 1
COL4A3BP-204ENST00000405807 NUP153P49790 1475 aaKnown RBP21.29■■□□□ 1
COL4A3BP-204ENST00000405807 RCAN3Q9UKA8 241 aa21.29■■□□□ 1
COL4A3BP-204ENST00000405807 GSE1Q14687 1217 aa21.28■■□□□ 1
COL4A3BP-204ENST00000405807 EXOC6Q8TAG9 804 aa21.28■■□□□ 1
COL4A3BP-204ENST00000405807 CAMSAP2Q08AD1 1489 aa21.28■■□□□ 1
COL4A3BP-204ENST00000405807 MS4A1P11836 297 aa21.27■■□□□ 1
COL4A3BP-204ENST00000405807 PDE3BQ13370 1112 aa21.27■■□□□ 1
COL4A3BP-204ENST00000405807 ADGRL2O95490 1459 aa21.27■■□□□ 1
COL4A3BP-204ENST00000405807 ANKRD30AQ9BXX3 1397 aa21.26■□□□□ 0.99
COL4A3BP-204ENST00000405807 PDE4AP27815 886 aa21.26■□□□□ 0.99
COL4A3BP-204ENST00000405807 NPM2Q86SE8 214 aaKnown RBP21.26■□□□□ 0.99
COL4A3BP-204ENST00000405807 ADGBQ8N7X0 1667 aa21.25■□□□□ 0.99
COL4A3BP-204ENST00000405807 HSP90AA1P07900 732 aaKnown RBP21.25■□□□□ 0.99
COL4A3BP-204ENST00000405807 NAP1L2Q9ULW6 460 aaPredicted RBP21.24■□□□□ 0.99
COL4A3BP-204ENST00000405807 LAS1LQ9Y4W2 734 aaKnown RBP21.24■□□□□ 0.99
COL4A3BP-204ENST00000405807 TROQ12816 1431 aaPredicted RBP21.24■□□□□ 0.99
COL4A3BP-204ENST00000405807 ST20-MTHFSA0A0A6YYL1 179 aa21.23■□□□□ 0.99
COL4A3BP-204ENST00000405807 BACH2Q9BYV9 841 aa21.23■□□□□ 0.99
COL4A3BP-204ENST00000405807 RAPGEF6Q8TEU7 1601 aa21.23■□□□□ 0.99
COL4A3BP-204ENST00000405807 KIAA0556O60303 1618 aa21.22■□□□□ 0.99
COL4A3BP-204ENST00000405807 DISP1Q96F81 1524 aa21.22■□□□□ 0.99
COL4A3BP-204ENST00000405807 ARHGEF12Q9NZN5 1544 aa21.22■□□□□ 0.99
COL4A3BP-204ENST00000405807 KIAA0586Q9BVV6 1533 aa21.21■□□□□ 0.99
COL4A3BP-204ENST00000405807 ANKRD50Q9ULJ7 1429 aa21.21■□□□□ 0.99
COL4A3BP-204ENST00000405807 ZNF777Q9ULD5 760 aaPredicted RBP21.21■□□□□ 0.99
COL4A3BP-204ENST00000405807 NLRP13Q86W25 1043 aa21.2■□□□□ 0.98
COL4A3BP-204ENST00000405807 PRDM4Q9UKN5 801 aa21.2■□□□□ 0.98
COL4A3BP-204ENST00000405807 PRG4Q92954 1404 aaPredicted RBP21.2■□□□□ 0.98
COL4A3BP-204ENST00000405807 GPATCH8Q9UKJ3 1502 aaKnown RBP21.2■□□□□ 0.98
COL4A3BP-204ENST00000405807 ITSN2Q9NZM3 1697 aa21.19■□□□□ 0.98
COL4A3BP-204ENST00000405807 PPM1GO15355 546 aaPredicted RBP21.18■□□□□ 0.98
COL4A3BP-204ENST00000405807 BBXQ8WY36 941 aaPredicted RBP21.18■□□□□ 0.98
COL4A3BP-204ENST00000405807 NUP155O75694 1391 aa21.18■□□□□ 0.98
COL4A3BP-204ENST00000405807 RGS3P49796 1198 aa21.17■□□□□ 0.98
COL4A3BP-204ENST00000405807 CHMP4BQ9H444 224 aaKnown RBP21.16■□□□□ 0.98
COL4A3BP-204ENST00000405807 KDM2AQ9Y2K7 1162 aa21.16■□□□□ 0.98
COL4A3BP-204ENST00000405807 CROCC2H7BZ55 1655 aa21.15■□□□□ 0.98
COL4A3BP-204ENST00000405807 DCAF11Q8TEB1 546 aa21.14■□□□□ 0.97
COL4A3BP-204ENST00000405807 NAP1L5Q96NT1 182 aaPredicted RBP21.14■□□□□ 0.97
COL4A3BP-204ENST00000405807 PARD3Q8TEW0 1356 aa21.13■□□□□ 0.97
COL4A3BP-204ENST00000405807 DDRGK1Q96HY6 314 aa21.12■□□□□ 0.97
COL4A3BP-204ENST00000405807 E9PCH4 1651 aa21.11■□□□□ 0.97
COL4A3BP-204ENST00000405807 FRAT1Q92837 279 aaPredicted RBP21.11■□□□□ 0.97
COL4A3BP-204ENST00000405807 RSPH4AQ5TD94 716 aa21.1■□□□□ 0.97
COL4A3BP-204ENST00000405807 CALD1Q05682 793 aaKnown RBP21.1■□□□□ 0.97
COL4A3BP-204ENST00000405807 INSRP06213 1382 aa21.09■□□□□ 0.97
COL4A3BP-204ENST00000405807 ADCY10Q96PN6 1610 aa21.08■□□□□ 0.97
COL4A3BP-204ENST00000405807 CDCA7LQ96GN5 454 aa21.08■□□□□ 0.97
COL4A3BP-204ENST00000405807 KDM5DQ9BY66 1539 aa21.07■□□□□ 0.96
COL4A3BP-204ENST00000405807 SHANK2Q9UPX8 1470 aa21.07■□□□□ 0.96
COL4A3BP-204ENST00000405807 PER1O15534 1290 aaPredicted RBP21.06■□□□□ 0.96
COL4A3BP-204ENST00000405807 TSPY4P0CV99 314 aa21.06■□□□□ 0.96
COL4A3BP-204ENST00000405807 TSPY10P0CW01 314 aa21.06■□□□□ 0.96
COL4A3BP-204ENST00000405807 GTF2E1P29083 439 aaPredicted RBP21.06■□□□□ 0.96
COL4A3BP-204ENST00000405807 C9orf84Q5VXU9 1444 aa21.06■□□□□ 0.96
COL4A3BP-204ENST00000405807 RRAGDQ9NQL2 400 aaPredicted RBP21.05■□□□□ 0.96
COL4A3BP-204ENST00000405807 CEP170Q5SW79 1584 aa21.05■□□□□ 0.96
COL4A3BP-204ENST00000405807 DHX37Q8IY37 1157 aaKnown RBP21.05■□□□□ 0.96
COL4A3BP-204ENST00000405807 PLIN1O60240 522 aa21.04■□□□□ 0.96
COL4A3BP-204ENST00000405807 ZMYM4Q5VZL5 1548 aa21.03■□□□□ 0.96
COL4A3BP-204ENST00000405807 MRC2Q9UBG0 1479 aa21.03■□□□□ 0.96
COL4A3BP-204ENST00000405807 CRBNQ96SW2 442 aa21.03■□□□□ 0.96
COL4A3BP-204ENST00000405807 PLB1Q6P1J6 1458 aa21.02■□□□□ 0.96
COL4A3BP-204ENST00000405807 PTPRGP23470 1445 aa21.02■□□□□ 0.96
COL4A3BP-204ENST00000405807 IFT140Q96RY7 1462 aa21.02■□□□□ 0.95
COL4A3BP-204ENST00000405807 GRIN2AQ12879 1464 aa21.01■□□□□ 0.95
COL4A3BP-204ENST00000405807 BLMP54132 1417 aaPredicted RBP21.01■□□□□ 0.95
COL4A3BP-204ENST00000405807 PLEKHD1A6NEE1 506 aa21■□□□□ 0.95
COL4A3BP-204ENST00000405807 DNAJC5BQ9UF47 199 aa21■□□□□ 0.95
COL4A3BP-204ENST00000405807 ZNF608Q9ULD9 1512 aaPredicted RBP21■□□□□ 0.95
COL4A3BP-204ENST00000405807 PLEKHH2Q8IVE3 1493 aa20.99■□□□□ 0.95
COL4A3BP-204ENST00000405807 PRAG1Q86YV5 1406 aa20.98■□□□□ 0.95
COL4A3BP-204ENST00000405807 CC2D1BQ5T0F9 858 aaKnown RBP20.97■□□□□ 0.95
COL4A3BP-204ENST00000405807 IPO4Q8TEX9 1081 aaKnown RBP20.97■□□□□ 0.95
COL4A3BP-204ENST00000405807 CANXP27824 592 aaKnown RBP20.96■□□□□ 0.95
COL4A3BP-204ENST00000405807 STAC3Q96MF2 364 aa20.95■□□□□ 0.94
COL4A3BP-204ENST00000405807 PNNQ9H307 717 aaKnown RBP20.95■□□□□ 0.94
COL4A3BP-204ENST00000405807 CDC42BPAQ5VT25 1732 aa20.95■□□□□ 0.94
COL4A3BP-204ENST00000405807 GPRASP1Q5JY77 1395 aa20.94■□□□□ 0.94
COL4A3BP-204ENST00000405807 TRPM1Q7Z4N2 1603 aa20.94■□□□□ 0.94
COL4A3BP-204ENST00000405807 NBPF1Q3BBV0 1214 aa20.94■□□□□ 0.94
COL4A3BP-204ENST00000405807 CCDC144AA2RUR9 1427 aa20.93■□□□□ 0.94
COL4A3BP-204ENST00000405807 CARMIL2Q6F5E8 1435 aa20.93■□□□□ 0.94
COL4A3BP-204ENST00000405807 BRD2P25440 801 aaKnown RBP20.93■□□□□ 0.94
COL4A3BP-204ENST00000405807 CENPQQ7L2Z9 268 aaPredicted RBP20.93■□□□□ 0.94
COL4A3BP-204ENST00000405807 PANK3Q9H999 370 aa20.93■□□□□ 0.94
COL4A3BP-204ENST00000405807 COL17A1Q9UMD9 1497 aaPredicted RBP20.93■□□□□ 0.94
COL4A3BP-204ENST00000405807 ABCC10Q5T3U5 1492 aa20.93■□□□□ 0.94
COL4A3BP-204ENST00000405807 KDM2BQ8NHM5 1336 aa20.92■□□□□ 0.94
COL4A3BP-204ENST00000405807 CHMP4AQ9BY43 222 aa20.92■□□□□ 0.94
COL4A3BP-204ENST00000405807 SKAP1Q86WV1 359 aa20.92■□□□□ 0.94
COL4A3BP-204ENST00000405807 CENPJQ9HC77 1338 aaPredicted RBP20.92■□□□□ 0.94
COL4A3BP-204ENST00000405807 NFKBIBQ15653 356 aa20.91■□□□□ 0.94
COL4A3BP-204ENST00000405807 TESK2Q96S53 571 aa20.91■□□□□ 0.94
COL4A3BP-204ENST00000405807 MAGI1Q96QZ7 1491 aaPredicted RBP20.9■□□□□ 0.94
COL4A3BP-204ENST00000405807 HNRNPMP52272 730 aaKnown RBP eCLIP20.9■□□□□ 0.947e-7■■■■□ 23.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms