RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 TROQ12816 1431 aaPredicted RBP15.04■□□□□ -0
RAPGEF3-204ENST00000405493 RALBP1Q15311 655 aa15.04■□□□□ -0
RAPGEF3-204ENST00000405493 PROSER2Q86WR7 435 aaPredicted RBP15.04■□□□□ -0
RAPGEF3-204ENST00000405493 KIF21BO75037 1637 aa15.04■□□□□ -0
RAPGEF3-204ENST00000405493 U2AF1L5P0DN76 240 aaPredicted RBP15.04■□□□□ -0
RAPGEF3-204ENST00000405493 U2AF1Q01081 240 aaKnown RBP eCLIP15.04■□□□□ -0
RAPGEF3-204ENST00000405493 NCLP19338 710 aaKnown RBP15.03■□□□□ -0
RAPGEF3-204ENST00000405493 RGS3P49796 1198 aa15.03■□□□□ -0
RAPGEF3-204ENST00000405493 RTN4Q9NQC3 1192 aaKnown RBP15.03■□□□□ -0
RAPGEF3-204ENST00000405493 L3MBTL2Q969R5 705 aa15.02■□□□□ -0
RAPGEF3-204ENST00000405493 SLC52A1Q9NWF4 448 aa15.02□□□□□ -0.01
RAPGEF3-204ENST00000405493 CD109Q6YHK3 1445 aa15.02□□□□□ -0.01
RAPGEF3-204ENST00000405493 GRIN2AQ12879 1464 aa15.02□□□□□ -0.01
RAPGEF3-204ENST00000405493 ERICH6BQ5W0A0 696 aa15.02□□□□□ -0.01
RAPGEF3-204ENST00000405493 DMRT2Q9Y5R5 561 aa15.02□□□□□ -0.01
RAPGEF3-204ENST00000405493 FGD6Q6ZV73 1430 aa15.02□□□□□ -0.01
RAPGEF3-204ENST00000405493 ANKRD50Q9ULJ7 1429 aa15.01□□□□□ -0.01
RAPGEF3-204ENST00000405493 PEG3Q9GZU2 1588 aa15.01□□□□□ -0.01
RAPGEF3-204ENST00000405493 SCAPERQ9BY12 1400 aa15.01□□□□□ -0.01
RAPGEF3-204ENST00000405493 DCAF8L1A6NGE4 600 aa15.01□□□□□ -0.01
RAPGEF3-204ENST00000405493 GOLGA6L22H0YM25 854 aa14.99□□□□□ -0.01
RAPGEF3-204ENST00000405493 ZNF330Q9Y3S2 320 aaPredicted RBP14.99□□□□□ -0.01
RAPGEF3-204ENST00000405493 PHF23Q9BUL5 403 aaPredicted RBP14.99□□□□□ -0.01
RAPGEF3-204ENST00000405493 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.99□□□□□ -0.01
RAPGEF3-204ENST00000405493 IPO8O15397 1037 aaKnown RBP14.98□□□□□ -0.01
RAPGEF3-204ENST00000405493 HECW1Q76N89 1606 aa14.98□□□□□ -0.01
RAPGEF3-204ENST00000405493 STK31Q9BXU1 1019 aa14.98□□□□□ -0.01
RAPGEF3-204ENST00000405493 TPRNQ4KMQ1 711 aa14.98□□□□□ -0.01
RAPGEF3-204ENST00000405493 NCOA2Q15596 1464 aa14.98□□□□□ -0.01
RAPGEF3-204ENST00000405493 MINK1Q8N4C8 1332 aaPredicted RBP14.97□□□□□ -0.01
RAPGEF3-204ENST00000405493 C1orf141Q5JVX7 400 aa14.97□□□□□ -0.01
RAPGEF3-204ENST00000405493 IQGAP2Q13576 1575 aa14.97□□□□□ -0.01
RAPGEF3-204ENST00000405493 GPRASP1Q5JY77 1395 aa14.97□□□□□ -0.01
RAPGEF3-204ENST00000405493 LTV1Q96GA3 475 aaPredicted RBP14.97□□□□□ -0.01
RAPGEF3-204ENST00000405493 CGNL1Q0VF96 1302 aa14.96□□□□□ -0.01
RAPGEF3-204ENST00000405493 RAPGEF3O95398 923 aa14.96□□□□□ -0.01
RAPGEF3-204ENST00000405493 CUL7Q14999 1698 aa14.96□□□□□ -0.02
RAPGEF3-204ENST00000405493 ZNF644Q9H582 1327 aaPredicted RBP14.95□□□□□ -0.02
RAPGEF3-204ENST00000405493 GTF2E1P29083 439 aaPredicted RBP14.95□□□□□ -0.02
RAPGEF3-204ENST00000405493 PRXQ9BXM0 1461 aa14.95□□□□□ -0.02
RAPGEF3-204ENST00000405493 PLB1Q6P1J6 1458 aa14.95□□□□□ -0.02
RAPGEF3-204ENST00000405493 LRRC9Q6ZRR7 1453 aa14.94□□□□□ -0.02
RAPGEF3-204ENST00000405493 MIA2Q96PC5 1412 aa14.94□□□□□ -0.02
RAPGEF3-204ENST00000405493 URB2Q14146 1524 aaKnown RBP14.94□□□□□ -0.02
RAPGEF3-204ENST00000405493 EHBP1L1Q8N3D4 1523 aa14.94□□□□□ -0.02
RAPGEF3-204ENST00000405493 TRIM44Q96DX7 344 aaPredicted RBP14.94□□□□□ -0.02
RAPGEF3-204ENST00000405493 PPP6R1Q9UPN7 881 aa14.94□□□□□ -0.02
RAPGEF3-204ENST00000405493 HMGB2P26583 209 aaKnown RBP14.94□□□□□ -0.02
RAPGEF3-204ENST00000405493 RRBP1Q9P2E9 1410 aaKnown RBP14.93□□□□□ -0.02
RAPGEF3-204ENST00000405493 G3V3G9 751 aa14.93□□□□□ -0.02
RAPGEF3-204ENST00000405493 DCAF8Q5TAQ9 597 aa14.93□□□□□ -0.02
RAPGEF3-204ENST00000405493 CENPJQ9HC77 1338 aaPredicted RBP14.92□□□□□ -0.02
RAPGEF3-204ENST00000405493 TEX14Q8IWB6 1497 aa14.91□□□□□ -0.02
RAPGEF3-204ENST00000405493 AKNAQ7Z591 1439 aa14.91□□□□□ -0.02
RAPGEF3-204ENST00000405493 SF3B2Q13435 895 aaKnown RBP14.91□□□□□ -0.02
RAPGEF3-204ENST00000405493 MSH5O43196 834 aa14.89□□□□□ -0.03
RAPGEF3-204ENST00000405493 CFAP44Q96MT7 982 aa14.89□□□□□ -0.03
RAPGEF3-204ENST00000405493 PHLDB1Q86UU1 1377 aa14.89□□□□□ -0.03
RAPGEF3-204ENST00000405493 C9orf84Q5VXU9 1444 aa14.89□□□□□ -0.03
RAPGEF3-204ENST00000405493 RPGRIP1LQ68CZ1 1315 aa14.89□□□□□ -0.03
RAPGEF3-204ENST00000405493 HFM1A2PYH4 1435 aa14.88□□□□□ -0.03
RAPGEF3-204ENST00000405493 CDK11BP21127 795 aaKnown RBP14.88□□□□□ -0.03
RAPGEF3-204ENST00000405493 TAF7LQ5H9L4 462 aa14.88□□□□□ -0.03
RAPGEF3-204ENST00000405493 TTC5Q8N0Z6 440 aa14.88□□□□□ -0.03
RAPGEF3-204ENST00000405493 TEFQ10587 303 aa14.88□□□□□ -0.03
RAPGEF3-204ENST00000405493 HSP90AB1P08238 724 aaKnown RBP14.87□□□□□ -0.03
RAPGEF3-204ENST00000405493 RAPGEF4Q8WZA2 1011 aa14.87□□□□□ -0.03
RAPGEF3-204ENST00000405493 TAOK2Q9UL54 1235 aa14.87□□□□□ -0.03
RAPGEF3-204ENST00000405493 WASHC2AQ641Q2 1341 aa14.87□□□□□ -0.03
RAPGEF3-204ENST00000405493 ZRSR1Q15695 479 aaKnown RBP14.86□□□□□ -0.03
RAPGEF3-204ENST00000405493 DENND4BO75064 1496 aaPredicted RBP14.86□□□□□ -0.03
RAPGEF3-204ENST00000405493 PTMAP06454 111 aaKnown RBP14.85□□□□□ -0.03
RAPGEF3-204ENST00000405493 ESCO1Q5FWF5 840 aa14.85□□□□□ -0.03
RAPGEF3-204ENST00000405493 KCNJ4P48050 445 aa14.85□□□□□ -0.03
RAPGEF3-204ENST00000405493 ZNF608Q9ULD9 1512 aaPredicted RBP14.85□□□□□ -0.03
RAPGEF3-204ENST00000405493 ST20-MTHFSA0A0A6YYL1 179 aa14.85□□□□□ -0.03
RAPGEF3-204ENST00000405493 NLRP13Q86W25 1043 aa14.84□□□□□ -0.03
RAPGEF3-204ENST00000405493 NAP1L5Q96NT1 182 aaPredicted RBP14.84□□□□□ -0.03
RAPGEF3-204ENST00000405493 FGD1P98174 961 aa14.84□□□□□ -0.03
RAPGEF3-204ENST00000405493 ADGRL1O94910 1474 aa14.83□□□□□ -0.03
RAPGEF3-204ENST00000405493 UNC13AQ9UPW8 1703 aa14.82□□□□□ -0.04
RAPGEF3-204ENST00000405493 GORABQ5T7V8 394 aa14.82□□□□□ -0.04
RAPGEF3-204ENST00000405493 EPRSP07814 1512 aaKnown RBP14.8□□□□□ -0.04
RAPGEF3-204ENST00000405493 NLRP6P59044 892 aa14.8□□□□□ -0.04
RAPGEF3-204ENST00000405493 NLRP2Q9NX02 1062 aa14.79□□□□□ -0.04
RAPGEF3-204ENST00000405493 SYTL4Q96C24 671 aaPredicted RBP14.79□□□□□ -0.04
RAPGEF3-204ENST00000405493 IPO9Q96P70 1041 aaKnown RBP14.79□□□□□ -0.04
RAPGEF3-204ENST00000405493 NAP1L2Q9ULW6 460 aaPredicted RBP14.79□□□□□ -0.04
RAPGEF3-204ENST00000405493 PANK3Q9H999 370 aa14.78□□□□□ -0.04
RAPGEF3-204ENST00000405493 CHMP3Q9Y3E7 222 aa14.78□□□□□ -0.04
RAPGEF3-204ENST00000405493 HMMRO75330 724 aa14.78□□□□□ -0.04
RAPGEF3-204ENST00000405493 HSCBQ8IWL3 235 aa14.78□□□□□ -0.04
RAPGEF3-204ENST00000405493 ARAP1Q96P48 1450 aa14.78□□□□□ -0.04
RAPGEF3-204ENST00000405493 ZNF692Q9BU19 519 aaPredicted RBP14.78□□□□□ -0.04
RAPGEF3-204ENST00000405493 CCDC141Q6ZP82 1450 aa14.78□□□□□ -0.04
RAPGEF3-204ENST00000405493 SPRYD3Q8NCJ5 442 aa14.77□□□□□ -0.04
RAPGEF3-204ENST00000405493 PIP4K2BP78356 416 aa14.77□□□□□ -0.04
RAPGEF3-204ENST00000405493 RCAN3Q9UKA8 241 aa14.77□□□□□ -0.04
RAPGEF3-204ENST00000405493 ANKRD30BQ9BXX2 1392 aa14.77□□□□□ -0.04
RAPGEF3-204ENST00000405493 GPATCH3Q96I76 525 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms