RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 YEATS2Q9ULM3 1422 aa5.36□□□□□ -1.55
RTN4-208ENST00000404909 HECW2Q9P2P5 1572 aa5.35□□□□□ -1.55
RTN4-208ENST00000404909 COL17A1Q9UMD9 1497 aaPredicted RBP5.35□□□□□ -1.55
RTN4-208ENST00000404909 ANKRD30BQ9BXX2 1392 aa5.35□□□□□ -1.55
RTN4-208ENST00000404909 FAM135AQ9P2D6 1515 aa5.35□□□□□ -1.55
RTN4-208ENST00000404909 KANK1Q14678 1352 aa5.35□□□□□ -1.55
RTN4-208ENST00000404909 RICTORQ6R327 1708 aa5.34□□□□□ -1.55
RTN4-208ENST00000404909 ABCA6Q8N139 1617 aa5.34□□□□□ -1.56
RTN4-208ENST00000404909 MLECQ14165 292 aa5.33□□□□□ -1.56
RTN4-208ENST00000404909 FRMPD1Q5SYB0 1578 aa5.33□□□□□ -1.56
RTN4-208ENST00000404909 WASHC2CQ9Y4E1 1318 aa5.33□□□□□ -1.56
RTN4-208ENST00000404909 TIMELESSQ9UNS1 1208 aa5.33□□□□□ -1.56
RTN4-208ENST00000404909 KDM5DQ9BY66 1539 aa5.33□□□□□ -1.56
RTN4-208ENST00000404909 UNC13BO14795 1591 aa5.33□□□□□ -1.56
RTN4-208ENST00000404909 L3MBTL2Q969R5 705 aa5.33□□□□□ -1.56
RTN4-208ENST00000404909 DIP2CQ9Y2E4 1556 aa5.32□□□□□ -1.56
RTN4-208ENST00000404909 ARID4BQ4LE39 1312 aaPredicted RBP5.32□□□□□ -1.56
RTN4-208ENST00000404909 PPP1R15AO75807 674 aaPredicted RBP5.32□□□□□ -1.56
RTN4-208ENST00000404909 ATP10AO60312 1499 aa5.32□□□□□ -1.56
RTN4-208ENST00000404909 MAGI2Q86UL8 1455 aa5.32□□□□□ -1.56
RTN4-208ENST00000404909 RGL3Q3MIN7 710 aa5.32□□□□□ -1.56
RTN4-208ENST00000404909 ZNF326Q5BKZ1 582 aaKnown RBP5.32□□□□□ -1.56
RTN4-208ENST00000404909 ZMYM4Q5VZL5 1548 aa5.31□□□□□ -1.56
RTN4-208ENST00000404909 CCDC144AA2RUR9 1427 aa5.31□□□□□ -1.56
RTN4-208ENST00000404909 RPRD2Q5VT52 1461 aaKnown RBP5.31□□□□□ -1.56
RTN4-208ENST00000404909 IQGAP3Q86VI3 1631 aa5.31□□□□□ -1.56
RTN4-208ENST00000404909 KDM2AQ9Y2K7 1162 aa5.31□□□□□ -1.56
RTN4-208ENST00000404909 EIF2AK4Q9P2K8 1649 aaKnown RBP5.31□□□□□ -1.56
RTN4-208ENST00000404909 DEPDC5O75140 1603 aa5.3□□□□□ -1.56
RTN4-208ENST00000404909 PLA2R1Q13018 1463 aa5.3□□□□□ -1.56
RTN4-208ENST00000404909 PRDM15P57071 1507 aaPredicted RBP5.3□□□□□ -1.56
RTN4-208ENST00000404909 DCAF11Q8TEB1 546 aa5.29□□□□□ -1.56
RTN4-208ENST00000404909 ESF1Q9H501 851 aaKnown RBP5.29□□□□□ -1.56
RTN4-208ENST00000404909 MROH1Q8NDA8 1641 aa5.29□□□□□ -1.56
RTN4-208ENST00000404909 ZNF316A6NFI3 1004 aaPredicted RBP5.29□□□□□ -1.56
RTN4-208ENST00000404909 CHGAP10645 457 aaKnown RBP5.29□□□□□ -1.56
RTN4-208ENST00000404909 HIRIP3Q9BW71 556 aaPredicted RBP5.29□□□□□ -1.56
RTN4-208ENST00000404909 VWDEQ8N2E2 1590 aa5.28□□□□□ -1.56
RTN4-208ENST00000404909 ARHGEF40Q8TER5 1519 aa5.28□□□□□ -1.56
RTN4-208ENST00000404909 RNF17Q9BXT8 1623 aaKnown RBP5.28□□□□□ -1.56
RTN4-208ENST00000404909 CFAP65Q6ZU64 1925 aaKnown RBP5.28□□□□□ -1.56
RTN4-208ENST00000404909 E9PCH4 1651 aa5.28□□□□□ -1.56
RTN4-208ENST00000404909 NPATQ14207 1427 aa5.28□□□□□ -1.56
RTN4-208ENST00000404909 TET3O43151 1660 aa5.28□□□□□ -1.56
RTN4-208ENST00000404909 ABCC3O15438 1527 aa5.28□□□□□ -1.56
RTN4-208ENST00000404909 NBPF8Q3BBV2 869 aa5.28□□□□□ -1.56
RTN4-208ENST00000404909 CEP152O94986 1710 aa5.28□□□□□ -1.56
RTN4-208ENST00000404909 PLPPR3Q6T4P5 718 aa5.27□□□□□ -1.57
RTN4-208ENST00000404909 EFCAB6Q5THR3 1501 aa5.27□□□□□ -1.57
RTN4-208ENST00000404909 FBXO31Q5XUX0 539 aaPredicted RBP5.27□□□□□ -1.57
RTN4-208ENST00000404909 LMTK2Q8IWU2 1503 aa5.27□□□□□ -1.57
RTN4-208ENST00000404909 PTPRTO14522 1441 aa5.27□□□□□ -1.57
RTN4-208ENST00000404909 AGLP35573 1532 aa5.26□□□□□ -1.57
RTN4-208ENST00000404909 PPP6R1Q9UPN7 881 aa5.26□□□□□ -1.57
RTN4-208ENST00000404909 UGGT1Q9NYU2 1555 aa5.26□□□□□ -1.57
RTN4-208ENST00000404909 BCORL1Q5H9F3 1711 aa5.26□□□□□ -1.57
RTN4-208ENST00000404909 SIGLEC1Q9BZZ2 1709 aa5.26□□□□□ -1.57
RTN4-208ENST00000404909 TRPM2O94759 1503 aa5.26□□□□□ -1.57
RTN4-208ENST00000404909 REREQ9P2R6 1566 aa5.25□□□□□ -1.57
RTN4-208ENST00000404909 SPHKAPQ2M3C7 1700 aa5.25□□□□□ -1.57
RTN4-208ENST00000404909 CAMSAP1Q5T5Y3 1602 aa5.25□□□□□ -1.57
RTN4-208ENST00000404909 IDI1Q13907 227 aa5.25□□□□□ -1.57
RTN4-208ENST00000404909 STAG3Q9UJ98 1225 aa5.25□□□□□ -1.57
RTN4-208ENST00000404909 NUTM2DQ5VT03 806 aaPredicted RBP5.24□□□□□ -1.57
RTN4-208ENST00000404909 SENP3Q9H4L4 574 aaPredicted RBP5.24□□□□□ -1.57
RTN4-208ENST00000404909 ZMYM3Q14202 1370 aa5.24□□□□□ -1.57
RTN4-208ENST00000404909 CLTCL1P53675 1640 aa5.24□□□□□ -1.57
RTN4-208ENST00000404909 ARHGAP31Q2M1Z3 1444 aa5.24□□□□□ -1.57
RTN4-208ENST00000404909 SPATA31E1Q6ZUB1 1445 aa5.24□□□□□ -1.57
RTN4-208ENST00000404909 CNTLNQ9NXG0 1405 aa5.24□□□□□ -1.57
RTN4-208ENST00000404909 CEBPAP49715 358 aaPredicted RBP5.24□□□□□ -1.57
RTN4-208ENST00000404909 EIF4G2P78344 907 aaKnown RBP eCLIP5.24□□□□□ -1.579e-7■■■■□ 19.9
RTN4-208ENST00000404909 DIEXFQ68CQ4 756 aaKnown RBP5.24□□□□□ -1.57
RTN4-208ENST00000404909 HSPA5P11021 654 aaKnown RBP5.24□□□□□ -1.57
RTN4-208ENST00000404909 CARD11Q9BXL7 1154 aa5.24□□□□□ -1.57
RTN4-208ENST00000404909 SLC52A1Q9NWF4 448 aa5.24□□□□□ -1.57
RTN4-208ENST00000404909 NOS1P29475 1434 aa5.23□□□□□ -1.57
RTN4-208ENST00000404909 CLTCQ00610 1675 aaKnown RBP5.23□□□□□ -1.57
RTN4-208ENST00000404909 ZC3H13Q5T200 1668 aaKnown RBP5.23□□□□□ -1.57
RTN4-208ENST00000404909 ROCK2O75116 1388 aaKnown RBP5.23□□□□□ -1.57
RTN4-208ENST00000404909 NBPF1Q3BBV0 1214 aa5.23□□□□□ -1.57
RTN4-208ENST00000404909 PRAG1Q86YV5 1406 aa5.22□□□□□ -1.57
RTN4-208ENST00000404909 UHRF1BP1Q6BDS2 1440 aa5.22□□□□□ -1.57
RTN4-208ENST00000404909 ERVK-7P63135 1459 aa5.22□□□□□ -1.57
RTN4-208ENST00000404909 ADGRF5Q8IZF2 1346 aa5.22□□□□□ -1.57
RTN4-208ENST00000404909 SYNMO15061 1565 aa5.21□□□□□ -1.57
RTN4-208ENST00000404909 USP47Q96K76 1375 aa5.21□□□□□ -1.58
RTN4-208ENST00000404909 KIF1BO60333 1816 aa5.21□□□□□ -1.58
RTN4-208ENST00000404909 DDX10Q13206 875 aaKnown RBP5.21□□□□□ -1.58
RTN4-208ENST00000404909 CFAP70Q5T0N1 1121 aa5.21□□□□□ -1.58
RTN4-208ENST00000404909 STAC3Q96MF2 364 aa5.21□□□□□ -1.58
RTN4-208ENST00000404909 POLR3GLQ9BT43 218 aa5.21□□□□□ -1.58
RTN4-208ENST00000404909 PREX1Q8TCU6 1659 aa5.2□□□□□ -1.58
RTN4-208ENST00000404909 TNRQ92752 1358 aa5.2□□□□□ -1.58
RTN4-208ENST00000404909 RALGAPBQ86X10 1494 aa5.2□□□□□ -1.58
RTN4-208ENST00000404909 RPGRIP1LQ68CZ1 1315 aa5.2□□□□□ -1.58
RTN4-208ENST00000404909 ADGRB3O60242 1522 aa5.2□□□□□ -1.58
RTN4-208ENST00000404909 ST20-MTHFSA0A0A6YYL1 179 aa5.2□□□□□ -1.58
RTN4-208ENST00000404909 VGFO15240 615 aaPredicted RBP5.2□□□□□ -1.58
RTN4-208ENST00000404909 MROH2AA6NES4 1674 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms