RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 MAP3K1Q13233 1512 aa30.9■■■□□ 2.54
HDAC11-205ENST00000404548 PZPP20742 1482 aa30.88■■■□□ 2.53
HDAC11-205ENST00000404548 KIF3BO15066 747 aa30.87■■■□□ 2.53
HDAC11-205ENST00000404548 NCKAP5LQ9HCH0 1330 aa30.87■■■□□ 2.53
HDAC11-205ENST00000404548 DNMT1P26358 1616 aaKnown RBP30.84■■■□□ 2.53
HDAC11-205ENST00000404548 TSPY4P0CV99 314 aa30.83■■■□□ 2.53
HDAC11-205ENST00000404548 TSPY10P0CW01 314 aa30.83■■■□□ 2.53
HDAC11-205ENST00000404548 MAST1Q9Y2H9 1570 aa30.83■■■□□ 2.53
HDAC11-205ENST00000404548 TNRQ92752 1358 aa30.81■■■□□ 2.52
HDAC11-205ENST00000404548 MIA2Q96PC5 1412 aa30.8■■■□□ 2.52
HDAC11-205ENST00000404548 WASHC2CQ9Y4E1 1318 aa30.79■■■□□ 2.52
HDAC11-205ENST00000404548 ZNF335Q9H4Z2 1342 aaPredicted RBP30.77■■■□□ 2.52
HDAC11-205ENST00000404548 RNF17Q9BXT8 1623 aaKnown RBP30.77■■■□□ 2.52
HDAC11-205ENST00000404548 MYOM3Q5VTT5 1437 aa30.75■■■□□ 2.51
HDAC11-205ENST00000404548 NLRP1Q9C000 1473 aa30.75■■■□□ 2.51
HDAC11-205ENST00000404548 LOC105371045A0A1W2PR82 267 aa30.74■■■□□ 2.51
HDAC11-205ENST00000404548 FBXO31Q5XUX0 539 aaPredicted RBP30.74■■■□□ 2.51
HDAC11-205ENST00000404548 EIF2AK4Q9P2K8 1649 aaKnown RBP30.73■■■□□ 2.51
HDAC11-205ENST00000404548 ZC3H13Q5T200 1668 aaKnown RBP30.71■■■□□ 2.51
HDAC11-205ENST00000404548 KANK4Q5T7N3 995 aaPredicted RBP30.7■■■□□ 2.51
HDAC11-205ENST00000404548 POLR1AO95602 1720 aaPredicted RBP30.7■■■□□ 2.5
HDAC11-205ENST00000404548 NEURL4Q96JN8 1562 aa30.69■■■□□ 2.5
HDAC11-205ENST00000404548 ABCC3O15438 1527 aa30.68■■■□□ 2.5
HDAC11-205ENST00000404548 UGGT1Q9NYU2 1555 aa30.64■■■□□ 2.5
HDAC11-205ENST00000404548 THEMISQ8N1K5 641 aaPredicted RBP30.64■■■□□ 2.5
HDAC11-205ENST00000404548 SPATA31D1Q6ZQQ2 1576 aa30.63■■■□□ 2.49
HDAC11-205ENST00000404548 DISP3Q9P2K9 1392 aa30.63■■■□□ 2.49
HDAC11-205ENST00000404548 MROH1Q8NDA8 1641 aa30.62■■■□□ 2.49
HDAC11-205ENST00000404548 SHANK2Q9UPX8 1470 aa30.62■■■□□ 2.49
HDAC11-205ENST00000404548 CPS1P31327 1500 aa30.62■■■□□ 2.49
HDAC11-205ENST00000404548 DUOX2Q9NRD8 1548 aa30.62■■■□□ 2.49
HDAC11-205ENST00000404548 MED14O60244 1454 aa30.61■■■□□ 2.49
HDAC11-205ENST00000404548 DEPDC5O75140 1603 aa30.61■■■□□ 2.49
HDAC11-205ENST00000404548 ANKLE2Q86XL3 938 aa30.6■■■□□ 2.49
HDAC11-205ENST00000404548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.6■■■□□ 2.49
HDAC11-205ENST00000404548 UBAP1LF5GYI3 381 aa30.59■■■□□ 2.49
HDAC11-205ENST00000404548 ERVK-7P63135 1459 aa30.57■■■□□ 2.48
HDAC11-205ENST00000404548 ERBINQ96RT1 1412 aa30.54■■■□□ 2.48
HDAC11-205ENST00000404548 PRDM15P57071 1507 aaPredicted RBP30.53■■■□□ 2.48
HDAC11-205ENST00000404548 CROCC2H7BZ55 1655 aa30.53■■■□□ 2.48
HDAC11-205ENST00000404548 NPHP4O75161 1426 aaPredicted RBP30.53■■■□□ 2.48
HDAC11-205ENST00000404548 VWDEQ8N2E2 1590 aa30.52■■■□□ 2.48
HDAC11-205ENST00000404548 KIF15Q9NS87 1388 aa30.52■■■□□ 2.48
HDAC11-205ENST00000404548 ABCC5O15440 1437 aa30.51■■■□□ 2.47
HDAC11-205ENST00000404548 PTPN23Q9H3S7 1636 aa30.51■■■□□ 2.47
HDAC11-205ENST00000404548 ARHGAP31Q2M1Z3 1444 aa30.5■■■□□ 2.47
HDAC11-205ENST00000404548 APLP2Q06481 763 aa30.48■■■□□ 2.47
HDAC11-205ENST00000404548 CEP152O94986 1710 aa30.47■■■□□ 2.47
HDAC11-205ENST00000404548 IQGAP1P46940 1657 aa30.46■■■□□ 2.47
HDAC11-205ENST00000404548 FGD6Q6ZV73 1430 aa30.46■■■□□ 2.47
HDAC11-205ENST00000404548 ILDR2Q71H61 639 aa30.45■■■□□ 2.47
HDAC11-205ENST00000404548 DAPK1P53355 1430 aa30.45■■■□□ 2.46
HDAC11-205ENST00000404548 UBR1Q8IWV7 1749 aa30.42■■■□□ 2.46
HDAC11-205ENST00000404548 TOM1O60784 492 aa30.41■■■□□ 2.46
HDAC11-205ENST00000404548 RRP7BPQ9NSQ0 103 aa30.38■■■□□ 2.45
HDAC11-205ENST00000404548 ARHGAP23Q9P227 1491 aa30.38■■■□□ 2.45
HDAC11-205ENST00000404548 SLIT1O75093 1534 aa30.37■■■□□ 2.45
HDAC11-205ENST00000404548 SOCS7O14512 581 aa30.37■■■□□ 2.45
HDAC11-205ENST00000404548 SCAF11Q99590 1463 aaKnown RBP30.36■■■□□ 2.45
HDAC11-205ENST00000404548 LMTK2Q8IWU2 1503 aa30.36■■■□□ 2.45
HDAC11-205ENST00000404548 ANKRD30AQ9BXX3 1397 aa30.35■■■□□ 2.45
HDAC11-205ENST00000404548 SYNMO15061 1565 aa30.35■■■□□ 2.45
HDAC11-205ENST00000404548 KANK1Q14678 1352 aa30.34■■■□□ 2.45
HDAC11-205ENST00000404548 LRRC7Q96NW7 1537 aa30.29■■■□□ 2.44
HDAC11-205ENST00000404548 ADGRL2O95490 1459 aa30.29■■■□□ 2.44
HDAC11-205ENST00000404548 ALKQ9UM73 1620 aa30.29■■■□□ 2.44
HDAC11-205ENST00000404548 CFAP65Q6ZU64 1925 aaKnown RBP30.28■■■□□ 2.44
HDAC11-205ENST00000404548 KDM5AP29375 1690 aaKnown RBP30.28■■■□□ 2.44
HDAC11-205ENST00000404548 STRCP1A6NGW2 1772 aa30.28■■■□□ 2.44
HDAC11-205ENST00000404548 HSPA1LP34931 641 aa30.27■■■□□ 2.44
HDAC11-205ENST00000404548 PIP4K2BP78356 416 aa30.27■■■□□ 2.44
HDAC11-205ENST00000404548 SCAF1Q9H7N4 1312 aaKnown RBP30.26■■■□□ 2.44
HDAC11-205ENST00000404548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.25■■■□□ 2.43
HDAC11-205ENST00000404548 LTKP29376 864 aa30.24■■■□□ 2.43
HDAC11-205ENST00000404548 PIK3C2BO00750 1634 aa30.24■■■□□ 2.43
HDAC11-205ENST00000404548 TXNDC2Q86VQ3 553 aa30.23■■■□□ 2.43
HDAC11-205ENST00000404548 TMEM2Q9UHN6 1383 aa30.23■■■□□ 2.43
HDAC11-205ENST00000404548 EID1Q9Y6B2 187 aa30.22■■■□□ 2.43
HDAC11-205ENST00000404548 EFCAB6Q5THR3 1501 aa30.22■■■□□ 2.43
HDAC11-205ENST00000404548 CHIC2Q9UKJ5 165 aa30.2■■■□□ 2.43
HDAC11-205ENST00000404548 NOS1P29475 1434 aa30.2■■■□□ 2.42
HDAC11-205ENST00000404548 MED1Q15648 1581 aaPredicted RBP30.16■■■□□ 2.42
HDAC11-205ENST00000404548 RPRD2Q5VT52 1461 aaKnown RBP30.15■■■□□ 2.42
HDAC11-205ENST00000404548 IDI1Q13907 227 aa30.14■■■□□ 2.42
HDAC11-205ENST00000404548 STAG3Q9UJ98 1225 aa30.13■■■□□ 2.41
HDAC11-205ENST00000404548 ANKRD50Q9ULJ7 1429 aa30.13■■■□□ 2.41
HDAC11-205ENST00000404548 ADGRB3O60242 1522 aa30.12■■■□□ 2.41
HDAC11-205ENST00000404548 SLC52A1Q9NWF4 448 aa30.11■■■□□ 2.41
HDAC11-205ENST00000404548 FAM50AQ14320 339 aaKnown RBP30.08■■■□□ 2.41
HDAC11-205ENST00000404548 TET3O43151 1660 aa30.07■■■□□ 2.41
HDAC11-205ENST00000404548 XIRP1Q702N8 1843 aaKnown RBP30.04■■■□□ 2.4
HDAC11-205ENST00000404548 UNC13BO14795 1591 aa30■■■□□ 2.39
HDAC11-205ENST00000404548 KCNA6P17658 529 aa30■■■□□ 2.39
HDAC11-205ENST00000404548 ROCK1Q13464 1354 aa29.99■■■□□ 2.39
HDAC11-205ENST00000404548 NKTRP30414 1462 aaKnown RBP29.99■■■□□ 2.39
HDAC11-205ENST00000404548 NWD1Q149M9 1564 aa29.98■■■□□ 2.39
HDAC11-205ENST00000404548 TMEM94Q12767 1356 aa29.97■■■□□ 2.39
HDAC11-205ENST00000404548 ZFYVE9O95405 1425 aa29.96■■■□□ 2.39
HDAC11-205ENST00000404548 GCC2Q8IWJ2 1684 aa29.96■■■□□ 2.39
HDAC11-205ENST00000404548 FAM135BQ49AJ0 1406 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms