RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 TRHP20396 242 aaPredicted RBP33.53■■■□□ 2.96
TRIOBP-203ENST00000403663 COL17A1Q9UMD9 1497 aaPredicted RBP33.53■■■□□ 2.96
TRIOBP-203ENST00000403663 ABCA6Q8N139 1617 aa33.53■■■□□ 2.96
TRIOBP-203ENST00000403663 ERBINQ96RT1 1412 aa33.52■■■□□ 2.96
TRIOBP-203ENST00000403663 FOXD1Q16676 465 aa33.49■■■□□ 2.95
TRIOBP-203ENST00000403663 NUP155O75694 1391 aa33.49■■■□□ 2.95
TRIOBP-203ENST00000403663 UNC13BO14795 1591 aa33.47■■■□□ 2.95
TRIOBP-203ENST00000403663 SLC4A1APQ9BWU0 796 aaKnown RBP33.46■■■□□ 2.95
TRIOBP-203ENST00000403663 SIN3AQ96ST3 1273 aa33.46■■■□□ 2.95
TRIOBP-203ENST00000403663 YEATS2Q9ULM3 1422 aa33.45■■■□□ 2.95
TRIOBP-203ENST00000403663 ANP32EQ9BTT0 268 aa33.45■■■□□ 2.94
TRIOBP-203ENST00000403663 KDM5DQ9BY66 1539 aa33.44■■■□□ 2.94
TRIOBP-203ENST00000403663 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.44■■■□□ 2.941e-6■■□□□ 13.9
TRIOBP-203ENST00000403663 DHX29Q7Z478 1369 aaKnown RBP33.43■■■□□ 2.94
TRIOBP-203ENST00000403663 DIP2CQ9Y2E4 1556 aa33.43■■■□□ 2.94
TRIOBP-203ENST00000403663 ZMYM4Q5VZL5 1548 aa33.42■■■□□ 2.94
TRIOBP-203ENST00000403663 A2MP01023 1474 aa33.41■■■□□ 2.94
TRIOBP-203ENST00000403663 MAGI2Q86UL8 1455 aa33.38■■■□□ 2.93
TRIOBP-203ENST00000403663 FAM135AQ9P2D6 1515 aa33.38■■■□□ 2.93
TRIOBP-203ENST00000403663 KIF3BO15066 747 aa33.36■■■□□ 2.93
TRIOBP-203ENST00000403663 EIF2AK4Q9P2K8 1649 aaKnown RBP33.36■■■□□ 2.93
TRIOBP-203ENST00000403663 DEPDC5O75140 1603 aa33.35■■■□□ 2.93
TRIOBP-203ENST00000403663 IQGAP3Q86VI3 1631 aa33.34■■■□□ 2.93
TRIOBP-203ENST00000403663 PKD2Q13563 968 aa33.34■■■□□ 2.93
TRIOBP-203ENST00000403663 MROH1Q8NDA8 1641 aa33.32■■■□□ 2.93
TRIOBP-203ENST00000403663 ANKRD30BQ9BXX2 1392 aa33.27■■■□□ 2.92
TRIOBP-203ENST00000403663 PRDM15P57071 1507 aaPredicted RBP33.24■■■□□ 2.91
TRIOBP-203ENST00000403663 RNF17Q9BXT8 1623 aaKnown RBP33.23■■■□□ 2.91
TRIOBP-203ENST00000403663 SIGLEC1Q9BZZ2 1709 aa33.22■■■□□ 2.91
TRIOBP-203ENST00000403663 BCORL1Q5H9F3 1711 aa33.22■■■□□ 2.91
TRIOBP-203ENST00000403663 VWDEQ8N2E2 1590 aa33.22■■■□□ 2.91
TRIOBP-203ENST00000403663 ATP10AO60312 1499 aa33.2■■■□□ 2.9
TRIOBP-203ENST00000403663 ARHGEF40Q8TER5 1519 aa33.18■■■□□ 2.9
TRIOBP-203ENST00000403663 GGT6Q6P531 493 aa33.17■■■□□ 2.9
TRIOBP-203ENST00000403663 CEP152O94986 1710 aa33.16■■■□□ 2.9
TRIOBP-203ENST00000403663 E9PCH4 1651 aa33.15■■■□□ 2.9
TRIOBP-203ENST00000403663 KANK1Q14678 1352 aa33.12■■■□□ 2.89
TRIOBP-203ENST00000403663 TET3O43151 1660 aa33.11■■■□□ 2.89
TRIOBP-203ENST00000403663 REREQ9P2R6 1566 aa33.1■■■□□ 2.89
TRIOBP-203ENST00000403663 PLA2R1Q13018 1463 aa33.09■■■□□ 2.89
TRIOBP-203ENST00000403663 RPRD2Q5VT52 1461 aaKnown RBP33.09■■■□□ 2.89
TRIOBP-203ENST00000403663 BCL11AQ9H165 835 aa33.06■■■□□ 2.88
TRIOBP-203ENST00000403663 TONSLQ96HA7 1378 aa33.05■■■□□ 2.88
TRIOBP-203ENST00000403663 ABCC3O15438 1527 aa33.02■■■□□ 2.88
TRIOBP-203ENST00000403663 EFCAB6Q5THR3 1501 aa33.02■■■□□ 2.88
TRIOBP-203ENST00000403663 AGLP35573 1532 aa33.02■■■□□ 2.88
TRIOBP-203ENST00000403663 LMTK2Q8IWU2 1503 aa33.02■■■□□ 2.88
TRIOBP-203ENST00000403663 CFAP65Q6ZU64 1925 aaKnown RBP32.99■■■□□ 2.87
TRIOBP-203ENST00000403663 WASHC2CQ9Y4E1 1318 aa32.99■■■□□ 2.87
TRIOBP-203ENST00000403663 BCANQ96GW7 911 aa32.97■■■□□ 2.87
TRIOBP-203ENST00000403663 TIMELESSQ9UNS1 1208 aa32.97■■■□□ 2.87
TRIOBP-203ENST00000403663 SPHKAPQ2M3C7 1700 aa32.97■■■□□ 2.87
TRIOBP-203ENST00000403663 CAMSAP1Q5T5Y3 1602 aa32.95■■■□□ 2.87
TRIOBP-203ENST00000403663 MLECQ14165 292 aa32.94■■■□□ 2.86
TRIOBP-203ENST00000403663 L3MBTL2Q969R5 705 aa32.94■■■□□ 2.86
TRIOBP-203ENST00000403663 PPP1R15AO75807 674 aaPredicted RBP32.93■■■□□ 2.86
TRIOBP-203ENST00000403663 FKBP8Q14318 412 aa32.93■■■□□ 2.86
TRIOBP-203ENST00000403663 CCDC144AA2RUR9 1427 aa32.92■■■□□ 2.86
TRIOBP-203ENST00000403663 NPATQ14207 1427 aa32.91■■■□□ 2.86
TRIOBP-203ENST00000403663 ZC3H13Q5T200 1668 aaKnown RBP32.91■■■□□ 2.86
TRIOBP-203ENST00000403663 PTPRTO14522 1441 aa32.9■■■□□ 2.86
TRIOBP-203ENST00000403663 TRPM2O94759 1503 aa32.89■■■□□ 2.86
TRIOBP-203ENST00000403663 UGGT1Q9NYU2 1555 aa32.86■■■□□ 2.85
TRIOBP-203ENST00000403663 CLTCL1P53675 1640 aa32.86■■■□□ 2.85
TRIOBP-203ENST00000403663 ARID4BQ4LE39 1312 aaPredicted RBP32.85■■■□□ 2.85
TRIOBP-203ENST00000403663 CLTCQ00610 1675 aaKnown RBP32.85■■■□□ 2.85
TRIOBP-203ENST00000403663 RBM19Q9Y4C8 960 aaKnown RBP32.79■■■□□ 2.84
TRIOBP-203ENST00000403663 RGL3Q3MIN7 710 aa32.76■■■□□ 2.83
TRIOBP-203ENST00000403663 ARHGAP31Q2M1Z3 1444 aa32.76■■■□□ 2.83
TRIOBP-203ENST00000403663 DDX10Q13206 875 aaKnown RBP32.73■■■□□ 2.83
TRIOBP-203ENST00000403663 SYNMO15061 1565 aa32.73■■■□□ 2.83
TRIOBP-203ENST00000403663 NBPF8Q3BBV2 869 aa32.72■■■□□ 2.83
TRIOBP-203ENST00000403663 PREX1Q8TCU6 1659 aa32.71■■■□□ 2.83
TRIOBP-203ENST00000403663 NOS1P29475 1434 aa32.71■■■□□ 2.83
TRIOBP-203ENST00000403663 SPATA31E1Q6ZUB1 1445 aa32.71■■■□□ 2.83
TRIOBP-203ENST00000403663 PPP6R1Q9UPN7 881 aa32.71■■■□□ 2.83
TRIOBP-203ENST00000403663 FBXO31Q5XUX0 539 aaPredicted RBP32.7■■■□□ 2.83
TRIOBP-203ENST00000403663 CNTLNQ9NXG0 1405 aa32.68■■■□□ 2.82
TRIOBP-203ENST00000403663 NEFLP07196 543 aa32.68■■■□□ 2.82
TRIOBP-203ENST00000403663 DCAF11Q8TEB1 546 aa32.68■■■□□ 2.82
TRIOBP-203ENST00000403663 KDM2AQ9Y2K7 1162 aa32.67■■■□□ 2.82
TRIOBP-203ENST00000403663 KIF1BO60333 1816 aa32.66■■■□□ 2.82
TRIOBP-203ENST00000403663 MROH2AA6NES4 1674 aa32.66■■■□□ 2.82
TRIOBP-203ENST00000403663 ZNF326Q5BKZ1 582 aaKnown RBP32.65■■■□□ 2.82
TRIOBP-203ENST00000403663 PIK3C2BO00750 1634 aa32.63■■■□□ 2.81
TRIOBP-203ENST00000403663 ERVK-7P63135 1459 aa32.61■■■□□ 2.81
TRIOBP-203ENST00000403663 ESF1Q9H501 851 aaKnown RBP32.61■■■□□ 2.81
TRIOBP-203ENST00000403663 ZMYM3Q14202 1370 aa32.6■■■□□ 2.81
TRIOBP-203ENST00000403663 FER1L4A9Z1Z3 1794 aa32.57■■■□□ 2.8
TRIOBP-203ENST00000403663 CCER2I3L3R5 266 aa32.56■■■□□ 2.8
TRIOBP-203ENST00000403663 ADGRB3O60242 1522 aa32.55■■■□□ 2.8
TRIOBP-203ENST00000403663 UHRF1BP1Q6BDS2 1440 aa32.55■■■□□ 2.8
TRIOBP-203ENST00000403663 CHGAP10645 457 aaKnown RBP32.55■■■□□ 2.8
TRIOBP-203ENST00000403663 IDI1Q13907 227 aa32.55■■■□□ 2.8
TRIOBP-203ENST00000403663 SPATA31D1Q6ZQQ2 1576 aa32.54■■■□□ 2.8
TRIOBP-203ENST00000403663 MYO5BQ9ULV0 1848 aa32.52■■■□□ 2.8
TRIOBP-203ENST00000403663 NEURL4Q96JN8 1562 aa32.52■■■□□ 2.8
TRIOBP-203ENST00000403663 HIRIP3Q9BW71 556 aaPredicted RBP32.51■■■□□ 2.8
TRIOBP-203ENST00000403663 PRAG1Q86YV5 1406 aa32.5■■■□□ 2.79
TRIOBP-203ENST00000403663 IFT172Q9UG01 1749 aa32.49■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms