RNA–Protein interactions for RNA: ENST00000403160.4

COPS9-202, Transcript of COP9 signalosome subunit 9, humanhuman

TSL 2

Gene COPS9, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-202ENST00000403160 PTPRTO14522 1441 aa24.61■■□□□ 1.53
COPS9-202ENST00000403160 TCOF1Q13428 1488 aaKnown RBP24.58■■□□□ 1.53
COPS9-202ENST00000403160 CROCC2H7BZ55 1655 aa24.58■■□□□ 1.53
COPS9-202ENST00000403160 ABCC5O15440 1437 aa24.56■■□□□ 1.52
COPS9-202ENST00000403160 SHANK2Q9UPX8 1470 aa24.56■■□□□ 1.52
COPS9-202ENST00000403160 DNMT1P26358 1616 aaKnown RBP24.55■■□□□ 1.52
COPS9-202ENST00000403160 DAPK1P53355 1430 aa24.54■■□□□ 1.52
COPS9-202ENST00000403160 NCOA1Q15788 1441 aa24.52■■□□□ 1.52
COPS9-202ENST00000403160 KDM5DQ9BY66 1539 aa24.51■■□□□ 1.51
COPS9-202ENST00000403160 FAM135AQ9P2D6 1515 aa24.51■■□□□ 1.51
COPS9-202ENST00000403160 EIF2AK4Q9P2K8 1649 aaKnown RBP24.51■■□□□ 1.51
COPS9-202ENST00000403160 DUOX2Q9NRD8 1548 aa24.51■■□□□ 1.51
COPS9-202ENST00000403160 WASHC2CQ9Y4E1 1318 aa24.5■■□□□ 1.51
COPS9-202ENST00000403160 FAM50AQ14320 339 aaKnown RBP24.49■■□□□ 1.51
COPS9-202ENST00000403160 PTPRKQ15262 1439 aa24.49■■□□□ 1.51
COPS9-202ENST00000403160 RNF17Q9BXT8 1623 aaKnown RBP24.49■■□□□ 1.51
COPS9-202ENST00000403160 KIF15Q9NS87 1388 aa24.48■■□□□ 1.51
COPS9-202ENST00000403160 RRBP1Q9P2E9 1410 aaKnown RBP24.48■■□□□ 1.51
COPS9-202ENST00000403160 CAMSAP1Q5T5Y3 1602 aa24.47■■□□□ 1.51
COPS9-202ENST00000403160 RRP7BPQ9NSQ0 103 aa24.47■■□□□ 1.51
COPS9-202ENST00000403160 PKD2Q13563 968 aa24.44■■□□□ 1.5
COPS9-202ENST00000403160 CHIC2Q9UKJ5 165 aa24.44■■□□□ 1.5
COPS9-202ENST00000403160 ANKRD30AQ9BXX3 1397 aa24.43■■□□□ 1.5
COPS9-202ENST00000403160 MYO3AQ8NEV4 1616 aa24.43■■□□□ 1.5
COPS9-202ENST00000403160 ERBINQ96RT1 1412 aa24.43■■□□□ 1.5
COPS9-202ENST00000403160 NCKAP5LQ9HCH0 1330 aa24.41■■□□□ 1.5
COPS9-202ENST00000403160 ZC3H13Q5T200 1668 aaKnown RBP24.41■■□□□ 1.5
COPS9-202ENST00000403160 PZPP20742 1482 aa24.41■■□□□ 1.5
COPS9-202ENST00000403160 PLA2R1Q13018 1463 aa24.41■■□□□ 1.5
COPS9-202ENST00000403160 LTBP4Q8N2S1 1624 aa24.41■■□□□ 1.5
COPS9-202ENST00000403160 ZNF142P52746 1687 aaPredicted RBP24.4■■□□□ 1.5
COPS9-202ENST00000403160 MROH1Q8NDA8 1641 aa24.39■■□□□ 1.5
COPS9-202ENST00000403160 CEP170BQ9Y4F5 1589 aaPredicted RBP24.39■■□□□ 1.5
COPS9-202ENST00000403160 ABCC3O15438 1527 aa24.39■■□□□ 1.49
COPS9-202ENST00000403160 IQSEC2Q5JU85 1478 aa24.38■■□□□ 1.49
COPS9-202ENST00000403160 FBXO31Q5XUX0 539 aaPredicted RBP24.37■■□□□ 1.49
COPS9-202ENST00000403160 ADGRL2O95490 1459 aa24.36■■□□□ 1.49
COPS9-202ENST00000403160 TNRQ92752 1358 aa24.35■■□□□ 1.49
COPS9-202ENST00000403160 CEP152O94986 1710 aa24.35■■□□□ 1.49
COPS9-202ENST00000403160 A2ML1A8K2U0 1454 aa24.34■■□□□ 1.49
COPS9-202ENST00000403160 PRDM15P57071 1507 aaPredicted RBP24.34■■□□□ 1.49
COPS9-202ENST00000403160 DEPDC5O75140 1603 aa24.32■■□□□ 1.48
COPS9-202ENST00000403160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.31■■□□□ 1.48
COPS9-202ENST00000403160 KANK1Q14678 1352 aa24.29■■□□□ 1.48
COPS9-202ENST00000403160 ZNF335Q9H4Z2 1342 aaPredicted RBP24.29■■□□□ 1.48
COPS9-202ENST00000403160 NLRP1Q9C000 1473 aa24.26■■□□□ 1.47
COPS9-202ENST00000403160 SPATA31D1Q6ZQQ2 1576 aa24.25■■□□□ 1.47
COPS9-202ENST00000403160 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.25■■□□□ 1.47
COPS9-202ENST00000403160 ANKRD50Q9ULJ7 1429 aa24.25■■□□□ 1.47
COPS9-202ENST00000403160 ERVK-7P63135 1459 aa24.25■■□□□ 1.47
COPS9-202ENST00000403160 CFAP65Q6ZU64 1925 aaKnown RBP24.24■■□□□ 1.47
COPS9-202ENST00000403160 ITGAEP38570 1179 aa24.23■■□□□ 1.47
COPS9-202ENST00000403160 THEMISQ8N1K5 641 aaPredicted RBP24.23■■□□□ 1.47
COPS9-202ENST00000403160 ARHGAP31Q2M1Z3 1444 aa24.22■■□□□ 1.47
COPS9-202ENST00000403160 ROCK1Q13464 1354 aa24.22■■□□□ 1.47
COPS9-202ENST00000403160 ANKLE2Q86XL3 938 aa24.21■■□□□ 1.47
COPS9-202ENST00000403160 VWDEQ8N2E2 1590 aa24.2■■□□□ 1.46
COPS9-202ENST00000403160 UGGT1Q9NYU2 1555 aa24.2■■□□□ 1.46
COPS9-202ENST00000403160 DISP3Q9P2K9 1392 aa24.19■■□□□ 1.46
COPS9-202ENST00000403160 LMTK2Q8IWU2 1503 aa24.19■■□□□ 1.46
COPS9-202ENST00000403160 UBAP1LF5GYI3 381 aa24.18■■□□□ 1.46
COPS9-202ENST00000403160 POLR1AO95602 1720 aaPredicted RBP24.15■■□□□ 1.46
COPS9-202ENST00000403160 EFCAB6Q5THR3 1501 aa24.13■■□□□ 1.45
COPS9-202ENST00000403160 UNC13BO14795 1591 aa24.12■■□□□ 1.45
COPS9-202ENST00000403160 NEURL4Q96JN8 1562 aa24.12■■□□□ 1.45
COPS9-202ENST00000403160 CPS1P31327 1500 aa24.1■■□□□ 1.45
COPS9-202ENST00000403160 MED14O60244 1454 aa24.09■■□□□ 1.45
COPS9-202ENST00000403160 UBR1Q8IWV7 1749 aa24.09■■□□□ 1.45
COPS9-202ENST00000403160 NPHP4O75161 1426 aaPredicted RBP24.08■■□□□ 1.44
COPS9-202ENST00000403160 TET3O43151 1660 aa24.08■■□□□ 1.44
COPS9-202ENST00000403160 RPRD2Q5VT52 1461 aaKnown RBP24.06■■□□□ 1.44
COPS9-202ENST00000403160 TOM1O60784 492 aa24.05■■□□□ 1.44
COPS9-202ENST00000403160 GCC2Q8IWJ2 1684 aa24.05■■□□□ 1.44
COPS9-202ENST00000403160 PIK3C2BO00750 1634 aa24.04■■□□□ 1.44
COPS9-202ENST00000403160 ILDR2Q71H61 639 aa24.04■■□□□ 1.44
COPS9-202ENST00000403160 SYNMO15061 1565 aa24.03■■□□□ 1.44
COPS9-202ENST00000403160 NOS1P29475 1434 aa24.03■■□□□ 1.44
COPS9-202ENST00000403160 STAG3Q9UJ98 1225 aa24.02■■□□□ 1.44
COPS9-202ENST00000403160 IQGAP3Q86VI3 1631 aa24.02■■□□□ 1.44
COPS9-202ENST00000403160 NUP155O75694 1391 aa24.01■■□□□ 1.43
COPS9-202ENST00000403160 IDI1Q13907 227 aa24■■□□□ 1.43
COPS9-202ENST00000403160 IQGAP1P46940 1657 aa23.99■■□□□ 1.43
COPS9-202ENST00000403160 KDM5AP29375 1690 aaKnown RBP23.99■■□□□ 1.43
COPS9-202ENST00000403160 HRCP23327 699 aa23.98■■□□□ 1.43
COPS9-202ENST00000403160 SLC52A1Q9NWF4 448 aa23.98■■□□□ 1.43
COPS9-202ENST00000403160 SLIT1O75093 1534 aa23.98■■□□□ 1.43
COPS9-202ENST00000403160 E9PCH4 1651 aa23.97■■□□□ 1.43
COPS9-202ENST00000403160 SOCS7O14512 581 aa23.97■■□□□ 1.43
COPS9-202ENST00000403160 SCAF11Q99590 1463 aaKnown RBP23.97■■□□□ 1.43
COPS9-202ENST00000403160 ARHGAP23Q9P227 1491 aa23.97■■□□□ 1.43
COPS9-202ENST00000403160 SCAF1Q9H7N4 1312 aaKnown RBP23.96■■□□□ 1.43
COPS9-202ENST00000403160 SETD5Q9C0A6 1442 aa23.95■■□□□ 1.42
COPS9-202ENST00000403160 PIP4K2BP78356 416 aa23.95■■□□□ 1.42
COPS9-202ENST00000403160 TXNDC2Q86VQ3 553 aa23.95■■□□□ 1.42
COPS9-202ENST00000403160 EID1Q9Y6B2 187 aa23.95■■□□□ 1.42
COPS9-202ENST00000403160 NAIPQ13075 1403 aa23.94■■□□□ 1.42
COPS9-202ENST00000403160 ADGRB3O60242 1522 aa23.94■■□□□ 1.42
COPS9-202ENST00000403160 TMEM2Q9UHN6 1383 aa23.93■■□□□ 1.42
COPS9-202ENST00000403160 CCER1Q8TC90 406 aaPredicted RBP23.93■■□□□ 1.42
COPS9-202ENST00000403160 LTKP29376 864 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms