RNA–Protein interactions for RNA: ENST00000402458.1

SNU13-204, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 3 BASIC

Gene SNU13, Length 462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-204ENST00000402458 FER1L4A9Z1Z3 1794 aa20.36■□□□□ 0.85
SNU13-204ENST00000402458 KANK1Q14678 1352 aa20.36■□□□□ 0.85
SNU13-204ENST00000402458 ADAMTSL3P82987 1691 aa20.35■□□□□ 0.85
SNU13-204ENST00000402458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.35■□□□□ 0.85
SNU13-204ENST00000402458 SETD5Q9C0A6 1442 aa20.35■□□□□ 0.85
SNU13-204ENST00000402458 DEPDC5O75140 1603 aa20.35■□□□□ 0.85
SNU13-204ENST00000402458 FAM135AQ9P2D6 1515 aa20.33■□□□□ 0.85
SNU13-204ENST00000402458 ACIN1Q9UKV3 1341 aaKnown RBP20.33■□□□□ 0.85
SNU13-204ENST00000402458 WASHC2CQ9Y4E1 1318 aa20.33■□□□□ 0.85
SNU13-204ENST00000402458 MADDQ8WXG6 1647 aa20.33■□□□□ 0.84
SNU13-204ENST00000402458 CNTLNQ9NXG0 1405 aa20.33■□□□□ 0.84
SNU13-204ENST00000402458 PRDM15P57071 1507 aaPredicted RBP20.32■□□□□ 0.84
SNU13-204ENST00000402458 UNC13BO14795 1591 aa20.31■□□□□ 0.84
SNU13-204ENST00000402458 KDM5DQ9BY66 1539 aa20.31■□□□□ 0.84
SNU13-204ENST00000402458 MROH1Q8NDA8 1641 aa20.31■□□□□ 0.84
SNU13-204ENST00000402458 ZC3H13Q5T200 1668 aaKnown RBP20.3■□□□□ 0.84
SNU13-204ENST00000402458 RIMS1Q86UR5 1692 aaKnown RBP20.3■□□□□ 0.84
SNU13-204ENST00000402458 CLTCQ00610 1675 aaKnown RBP20.29■□□□□ 0.84
SNU13-204ENST00000402458 KDM4FA0A1W2PPD8 638 aa20.29■□□□□ 0.84
SNU13-204ENST00000402458 TRIM52Q96A61 297 aa20.29■□□□□ 0.84
SNU13-204ENST00000402458 NUP155O75694 1391 aa20.27■□□□□ 0.84
SNU13-204ENST00000402458 RAB3GAP2Q9H2M9 1393 aa20.27■□□□□ 0.84
SNU13-204ENST00000402458 MROH2AA6NES4 1674 aa20.26■□□□□ 0.83
SNU13-204ENST00000402458 CEP152O94986 1710 aa20.26■□□□□ 0.83
SNU13-204ENST00000402458 ABCC3O15438 1527 aa20.26■□□□□ 0.83
SNU13-204ENST00000402458 VWDEQ8N2E2 1590 aa20.24■□□□□ 0.83
SNU13-204ENST00000402458 IQGAP3Q86VI3 1631 aa20.24■□□□□ 0.83
SNU13-204ENST00000402458 HRCP23327 699 aa20.23■□□□□ 0.83
SNU13-204ENST00000402458 PCGF6Q9BYE7 350 aa20.23■□□□□ 0.83
SNU13-204ENST00000402458 ZMYM3Q14202 1370 aa20.22■□□□□ 0.83
SNU13-204ENST00000402458 PTPRMP28827 1452 aa20.22■□□□□ 0.83
SNU13-204ENST00000402458 LMTK2Q8IWU2 1503 aa20.22■□□□□ 0.83
SNU13-204ENST00000402458 CAMSAP1Q5T5Y3 1602 aa20.21■□□□□ 0.83
SNU13-204ENST00000402458 PLPPR3Q6T4P5 718 aa20.21■□□□□ 0.83
SNU13-204ENST00000402458 TET3O43151 1660 aa20.19■□□□□ 0.82
SNU13-204ENST00000402458 C3P01024 1663 aa20.19■□□□□ 0.82
SNU13-204ENST00000402458 SLC4A1APQ9BWU0 796 aaKnown RBP20.17■□□□□ 0.82
SNU13-204ENST00000402458 PZPP20742 1482 aa20.17■□□□□ 0.82
SNU13-204ENST00000402458 EFCAB6Q5THR3 1501 aa20.17■□□□□ 0.82
SNU13-204ENST00000402458 CEBPAP49715 358 aaPredicted RBP20.16■□□□□ 0.82
SNU13-204ENST00000402458 ARHGAP31Q2M1Z3 1444 aa20.16■□□□□ 0.82
SNU13-204ENST00000402458 CFAP65Q6ZU64 1925 aaKnown RBP20.14■□□□□ 0.81
SNU13-204ENST00000402458 RPRD2Q5VT52 1461 aaKnown RBP20.13■□□□□ 0.81
SNU13-204ENST00000402458 NPATQ14207 1427 aa20.12■□□□□ 0.81
SNU13-204ENST00000402458 AEBP2Q6ZN18 517 aaPredicted RBP20.12■□□□□ 0.81
SNU13-204ENST00000402458 MPHOSPH9Q99550 1183 aa20.12■□□□□ 0.81
SNU13-204ENST00000402458 E9PCH4 1651 aa20.1■□□□□ 0.81
SNU13-204ENST00000402458 PKD2Q13563 968 aa20.1■□□□□ 0.81
SNU13-204ENST00000402458 SETD1BQ9UPS6 1966 aaKnown RBP20.1■□□□□ 0.81
SNU13-204ENST00000402458 PREX1Q8TCU6 1659 aa20.1■□□□□ 0.81
SNU13-204ENST00000402458 FBXO31Q5XUX0 539 aaPredicted RBP20.09■□□□□ 0.81
SNU13-204ENST00000402458 ERVK-7P63135 1459 aa20.08■□□□□ 0.81
SNU13-204ENST00000402458 SPATA31D1Q6ZQQ2 1576 aa20.07■□□□□ 0.8
SNU13-204ENST00000402458 TNRQ92752 1358 aa20.07■□□□□ 0.8
SNU13-204ENST00000402458 SPHKAPQ2M3C7 1700 aa20.03■□□□□ 0.8
SNU13-204ENST00000402458 NOS1P29475 1434 aa20.02■□□□□ 0.8
SNU13-204ENST00000402458 UHRF1BP1Q6BDS2 1440 aa20.02■□□□□ 0.79
SNU13-204ENST00000402458 FOXD1Q16676 465 aa20■□□□□ 0.79
SNU13-204ENST00000402458 SLC52A1Q9NWF4 448 aa20■□□□□ 0.79
SNU13-204ENST00000402458 MYO3AQ8NEV4 1616 aa20■□□□□ 0.79
SNU13-204ENST00000402458 NLRP1Q9C000 1473 aa19.99■□□□□ 0.79
SNU13-204ENST00000402458 PTPRTO14522 1441 aa19.98■□□□□ 0.79
SNU13-204ENST00000402458 SYNMO15061 1565 aa19.98■□□□□ 0.79
SNU13-204ENST00000402458 TRPM2O94759 1503 aa19.97■□□□□ 0.79
SNU13-204ENST00000402458 STAG3Q9UJ98 1225 aa19.96■□□□□ 0.79
SNU13-204ENST00000402458 A2ML1A8K2U0 1454 aa19.95■□□□□ 0.78
SNU13-204ENST00000402458 ZNF142P52746 1687 aaPredicted RBP19.94■□□□□ 0.78
SNU13-204ENST00000402458 IDI1Q13907 227 aa19.94■□□□□ 0.78
SNU13-204ENST00000402458 CEP170BQ9Y4F5 1589 aaPredicted RBP19.94■□□□□ 0.78
SNU13-204ENST00000402458 DHX57Q6P158 1386 aaKnown RBP19.93■□□□□ 0.78
SNU13-204ENST00000402458 CCDC144AA2RUR9 1427 aa19.93■□□□□ 0.78
SNU13-204ENST00000402458 PIK3C2BO00750 1634 aa19.92■□□□□ 0.78
SNU13-204ENST00000402458 PLA2R1Q13018 1463 aa19.92■□□□□ 0.78
SNU13-204ENST00000402458 CHGAP10645 457 aaKnown RBP19.91■□□□□ 0.78
SNU13-204ENST00000402458 UGGT1Q9NYU2 1555 aa19.91■□□□□ 0.78
SNU13-204ENST00000402458 THEMISQ8N1K5 641 aaPredicted RBP19.9■□□□□ 0.78
SNU13-204ENST00000402458 CLTCL1P53675 1640 aa19.9■□□□□ 0.78
SNU13-204ENST00000402458 KIF1BO60333 1816 aa19.9■□□□□ 0.78
SNU13-204ENST00000402458 KDM5AP29375 1690 aaKnown RBP19.89■□□□□ 0.77
SNU13-204ENST00000402458 LMTK3Q96Q04 1460 aa19.89■□□□□ 0.77
SNU13-204ENST00000402458 ANKRD30BQ9BXX2 1392 aa19.89■□□□□ 0.77
SNU13-204ENST00000402458 UBR1Q8IWV7 1749 aa19.88■□□□□ 0.77
SNU13-204ENST00000402458 ADGRB3O60242 1522 aa19.88■□□□□ 0.77
SNU13-204ENST00000402458 TMEM131LA2VDJ0 1609 aa19.84■□□□□ 0.77
SNU13-204ENST00000402458 MYO5BQ9ULV0 1848 aa19.83■□□□□ 0.77
SNU13-204ENST00000402458 ZNF326Q5BKZ1 582 aaKnown RBP19.83■□□□□ 0.77
SNU13-204ENST00000402458 HDGFP51858 240 aaKnown RBP19.82■□□□□ 0.76
SNU13-204ENST00000402458 HSPA2P54652 639 aa19.82■□□□□ 0.76
SNU13-204ENST00000402458 CCER1Q8TC90 406 aaPredicted RBP19.81■□□□□ 0.76
SNU13-204ENST00000402458 EID1Q9Y6B2 187 aa19.8■□□□□ 0.76
SNU13-204ENST00000402458 ANKLE2Q86XL3 938 aa19.78■□□□□ 0.76
SNU13-204ENST00000402458 TMEM2Q9UHN6 1383 aa19.78■□□□□ 0.76
SNU13-204ENST00000402458 SLIT1O75093 1534 aa19.77■□□□□ 0.76
SNU13-204ENST00000402458 RGL3Q3MIN7 710 aa19.77■□□□□ 0.76
SNU13-204ENST00000402458 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.77■□□□□ 0.76
SNU13-204ENST00000402458 NEURL4Q96JN8 1562 aa19.77■□□□□ 0.76
SNU13-204ENST00000402458 CLSPNQ9HAW4 1339 aa19.76■□□□□ 0.75
SNU13-204ENST00000402458 RIMS2Q9UQ26 1411 aa19.76■□□□□ 0.75
SNU13-204ENST00000402458 RPGRIP1LQ68CZ1 1315 aa19.76■□□□□ 0.75
SNU13-204ENST00000402458 ARHGAP23Q9P227 1491 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms