RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 USP35Q9P2H5 1018 aa5.73□□□□□ -1.49
CLHC1-201ENST00000401408 LMOD2Q6P5Q4 547 aa5.72□□□□□ -1.49
CLHC1-201ENST00000401408 JPH4Q96JJ6 628 aa5.72□□□□□ -1.49
CLHC1-201ENST00000401408 PKNOX2Q96KN3 472 aa5.72□□□□□ -1.49
CLHC1-201ENST00000401408 MARVELD3Q96A59 401 aa5.72□□□□□ -1.49
CLHC1-201ENST00000401408 ERICH3Q5RHP9 1530 aa5.72□□□□□ -1.49
CLHC1-201ENST00000401408 RGL2O15211 777 aa5.71□□□□□ -1.49
CLHC1-201ENST00000401408 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.71□□□□□ -1.5
CLHC1-201ENST00000401408 ATF5Q9Y2D1 282 aaPredicted RBP5.71□□□□□ -1.5
CLHC1-201ENST00000401408 CHGAP10645 457 aaKnown RBP5.7□□□□□ -1.5
CLHC1-201ENST00000401408 ADAMTSL3P82987 1691 aa5.7□□□□□ -1.5
CLHC1-201ENST00000401408 TMCO4Q5TGY1 634 aa5.7□□□□□ -1.5
CLHC1-201ENST00000401408 AEBP1Q8IUX7 1158 aa5.7□□□□□ -1.5
CLHC1-201ENST00000401408 FAM177A1Q8N128 213 aaPredicted RBP5.69□□□□□ -1.5
CLHC1-201ENST00000401408 ABCC2Q92887 1545 aa5.69□□□□□ -1.5
CLHC1-201ENST00000401408 ZNF692Q9BU19 519 aaPredicted RBP5.68□□□□□ -1.5
CLHC1-201ENST00000401408 MYCNP04198 464 aaPredicted RBP5.68□□□□□ -1.5
CLHC1-201ENST00000401408 PLB1Q6P1J6 1458 aa5.68□□□□□ -1.5
CLHC1-201ENST00000401408 ASXL2Q76L83 1435 aa5.68□□□□□ -1.5
CLHC1-201ENST00000401408 PCF11O94913 1555 aaKnown RBP5.67□□□□□ -1.5
CLHC1-201ENST00000401408 E9PSI1 815 aa5.67□□□□□ -1.5
CLHC1-201ENST00000401408 MFAP1P55081 439 aaKnown RBP5.67□□□□□ -1.5
CLHC1-201ENST00000401408 FGD1P98174 961 aa5.67□□□□□ -1.5
CLHC1-201ENST00000401408 ZNF326Q5BKZ1 582 aaKnown RBP5.67□□□□□ -1.5
CLHC1-201ENST00000401408 SLAIN1Q8ND83 568 aa5.67□□□□□ -1.5
CLHC1-201ENST00000401408 DISP3Q9P2K9 1392 aa5.67□□□□□ -1.5
CLHC1-201ENST00000401408 TICAM2Q86XR7 235 aa5.67□□□□□ -1.5
CLHC1-201ENST00000401408 ZNF592Q92610 1267 aa5.67□□□□□ -1.5
CLHC1-201ENST00000401408 SSUH2Q9Y2M2 353 aa5.67□□□□□ -1.5
CLHC1-201ENST00000401408 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.67□□□□□ -1.5
CLHC1-201ENST00000401408 SPATA31D1Q6ZQQ2 1576 aa5.66□□□□□ -1.5
CLHC1-201ENST00000401408 EPRSP07814 1512 aaKnown RBP5.66□□□□□ -1.5
CLHC1-201ENST00000401408 KIAA0586Q9BVV6 1533 aa5.66□□□□□ -1.5
CLHC1-201ENST00000401408 CUL7Q14999 1698 aa5.66□□□□□ -1.5
CLHC1-201ENST00000401408 UHRF1BP1LA0JNW5 1464 aa5.66□□□□□ -1.5
CLHC1-201ENST00000401408 PTPRMP28827 1452 aa5.66□□□□□ -1.5
CLHC1-201ENST00000401408 RNF166Q96A37 237 aaPredicted RBP5.66□□□□□ -1.5
CLHC1-201ENST00000401408 TEX14Q8IWB6 1497 aa5.66□□□□□ -1.5
CLHC1-201ENST00000401408 KIF21BO75037 1637 aa5.66□□□□□ -1.5
CLHC1-201ENST00000401408 BIVM-ERCC5R4GMW8 1640 aa5.66□□□□□ -1.5
CLHC1-201ENST00000401408 RSPH4AQ5TD94 716 aa5.66□□□□□ -1.5
CLHC1-201ENST00000401408 PSMD1Q99460 953 aa5.66□□□□□ -1.5
CLHC1-201ENST00000401408 CWC22Q9HCG8 908 aaKnown RBP5.66□□□□□ -1.5
CLHC1-201ENST00000401408 PPM1GO15355 546 aaPredicted RBP5.65□□□□□ -1.5
CLHC1-201ENST00000401408 CLSTN1O94985 981 aa5.65□□□□□ -1.5
CLHC1-201ENST00000401408 ZFP91Q96JP5 570 aaPredicted RBP5.65□□□□□ -1.5
CLHC1-201ENST00000401408 SLC24A3Q9HC58 644 aa5.65□□□□□ -1.5
CLHC1-201ENST00000401408 WRNQ14191 1432 aaPredicted RBP eCLIP5.64□□□□□ -1.51
CLHC1-201ENST00000401408 ATN1P54259 1190 aaPredicted RBP5.64□□□□□ -1.51
CLHC1-201ENST00000401408 CCDC82Q8N4S0 544 aa5.64□□□□□ -1.51
CLHC1-201ENST00000401408 TRAIPQ9BWF2 469 aa5.64□□□□□ -1.51
CLHC1-201ENST00000401408 BRPF3Q9ULD4 1205 aa5.64□□□□□ -1.51
CLHC1-201ENST00000401408 ARID4BQ4LE39 1312 aaPredicted RBP5.64□□□□□ -1.51
CLHC1-201ENST00000401408 KDM5BQ9UGL1 1544 aa5.64□□□□□ -1.51
CLHC1-201ENST00000401408 IRX6P78412 446 aaPredicted RBP5.63□□□□□ -1.51
CLHC1-201ENST00000401408 CERS3Q8IU89 383 aa5.63□□□□□ -1.51
CLHC1-201ENST00000401408 CERKQ8TCT0 537 aa5.63□□□□□ -1.51
CLHC1-201ENST00000401408 GZF1Q9H116 711 aaPredicted RBP5.63□□□□□ -1.51
CLHC1-201ENST00000401408 MAGI3Q5TCQ9 1506 aa5.62□□□□□ -1.51
CLHC1-201ENST00000401408 MS4A3Q96HJ5 214 aa5.62□□□□□ -1.51
CLHC1-201ENST00000401408 BCORL1Q5H9F3 1711 aa5.62□□□□□ -1.51
CLHC1-201ENST00000401408 PTPRGP23470 1445 aa5.61□□□□□ -1.51
CLHC1-201ENST00000401408 ARAP3Q8WWN8 1544 aa5.61□□□□□ -1.51
CLHC1-201ENST00000401408 CFAP43Q8NDM7 1665 aa5.61□□□□□ -1.51
CLHC1-201ENST00000401408 POTEB3A0JP26 581 aa5.6□□□□□ -1.51
CLHC1-201ENST00000401408 POTEBQ6S5H4 581 aa5.6□□□□□ -1.51
CLHC1-201ENST00000401408 ZC3H15Q8WU90 426 aaKnown RBP5.6□□□□□ -1.51
CLHC1-201ENST00000401408 CCDC136Q96JN2 1154 aa5.6□□□□□ -1.51
CLHC1-201ENST00000401408 ZCCHC11Q5TAX3 1644 aaKnown RBP5.6□□□□□ -1.51
CLHC1-201ENST00000401408 MADDQ8WXG6 1647 aa5.6□□□□□ -1.51
CLHC1-201ENST00000401408 CC2D2BQ6DHV5 1058 aa5.59□□□□□ -1.51
CLHC1-201ENST00000401408 SPOCK2Q92563 424 aa5.59□□□□□ -1.52
CLHC1-201ENST00000401408 A0A0U1RQG5 324 aaPredicted RBP5.58□□□□□ -1.52
CLHC1-201ENST00000401408 SPDYE4A6NLX3 237 aa5.58□□□□□ -1.52
CLHC1-201ENST00000401408 TNIKQ9UKE5 1360 aa5.58□□□□□ -1.52
CLHC1-201ENST00000401408 UACAQ9BZF9 1416 aa5.58□□□□□ -1.52
CLHC1-201ENST00000401408 STRCQ7RTU9 1775 aa5.58□□□□□ -1.52
CLHC1-201ENST00000401408 TMED8Q6PL24 325 aaPredicted RBP5.58□□□□□ -1.52
CLHC1-201ENST00000401408 P3H3Q8IVL6 736 aa5.58□□□□□ -1.52
CLHC1-201ENST00000401408 IL27Q8NEV9 243 aa5.58□□□□□ -1.52
CLHC1-201ENST00000401408 COLQQ9Y215 455 aaPredicted RBP5.58□□□□□ -1.52
CLHC1-201ENST00000401408 PAK3O75914 559 aaPredicted RBP5.57□□□□□ -1.52
CLHC1-201ENST00000401408 ZEB1P37275 1124 aaPredicted RBP5.57□□□□□ -1.52
CLHC1-201ENST00000401408 MKRN3Q13064 507 aaKnown RBP5.57□□□□□ -1.52
CLHC1-201ENST00000401408 WDR70Q9NW82 654 aa5.57□□□□□ -1.52
CLHC1-201ENST00000401408 WDR7Q9Y4E6 1490 aa5.57□□□□□ -1.52
CLHC1-201ENST00000401408 HS3ST6Q96QI5 342 aa5.56□□□□□ -1.52
CLHC1-201ENST00000401408 DISP1Q96F81 1524 aa5.56□□□□□ -1.52
CLHC1-201ENST00000401408 ZNF526Q8TF50 670 aaPredicted RBP5.56□□□□□ -1.52
CLHC1-201ENST00000401408 NAP1L5Q96NT1 182 aaPredicted RBP5.56□□□□□ -1.52
CLHC1-201ENST00000401408 SRCAPQ6ZRS2 3230 aa5.55□□□□□ -1.52
CLHC1-201ENST00000401408 EMP3P54852 163 aa5.55□□□□□ -1.52
CLHC1-201ENST00000401408 CCDC125Q86Z20 511 aa5.55□□□□□ -1.52
CLHC1-201ENST00000401408 PROM2Q8N271 834 aa5.55□□□□□ -1.52
CLHC1-201ENST00000401408 FRMPD1Q5SYB0 1578 aa5.55□□□□□ -1.52
CLHC1-201ENST00000401408 RIMS1Q86UR5 1692 aaKnown RBP5.54□□□□□ -1.52
CLHC1-201ENST00000401408 CD109Q6YHK3 1445 aa5.54□□□□□ -1.52
CLHC1-201ENST00000401408 FBXW7Q969H0 707 aa5.54□□□□□ -1.52
CLHC1-201ENST00000401408 LTBP4Q8N2S1 1624 aa5.54□□□□□ -1.52
CLHC1-201ENST00000401408 IQSEC2Q5JU85 1478 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms