RNA–Protein interactions for RNA: ENST00000400634.2

RSPO4-202, Transcript of R-spondin 4, humanhuman

TSL 1 (best) BASIC

Gene RSPO4, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4-202ENST00000400634 PTPRKQ15262 1439 aa37.5■■■■□ 3.59
RSPO4-202ENST00000400634 DUOX2Q9NRD8 1548 aa37.5■■■■□ 3.59
RSPO4-202ENST00000400634 RNF17Q9BXT8 1623 aaKnown RBP37.5■■■■□ 3.59
RSPO4-202ENST00000400634 DAPK1P53355 1430 aa37.49■■■■□ 3.59
RSPO4-202ENST00000400634 WASHC2CQ9Y4E1 1318 aa37.46■■■■□ 3.59
RSPO4-202ENST00000400634 STRCQ7RTU9 1775 aa37.46■■■■□ 3.59
RSPO4-202ENST00000400634 MYO3AQ8NEV4 1616 aa37.44■■■■□ 3.58
RSPO4-202ENST00000400634 DMRT2Q9Y5R5 561 aa37.43■■■■□ 3.58
RSPO4-202ENST00000400634 ZNF142P52746 1687 aaPredicted RBP37.42■■■■□ 3.58
RSPO4-202ENST00000400634 KIF15Q9NS87 1388 aa37.42■■■■□ 3.58
RSPO4-202ENST00000400634 ZC3H13Q5T200 1668 aaKnown RBP37.41■■■■□ 3.58
RSPO4-202ENST00000400634 PZPP20742 1482 aa37.39■■■■□ 3.58
RSPO4-202ENST00000400634 ERBINQ96RT1 1412 aa37.37■■■■□ 3.57
RSPO4-202ENST00000400634 CEP170BQ9Y4F5 1589 aaPredicted RBP37.36■■■■□ 3.57
RSPO4-202ENST00000400634 ANKRD30AQ9BXX3 1397 aa37.34■■■■□ 3.57
RSPO4-202ENST00000400634 RRP7BPQ9NSQ0 103 aa37.34■■■■□ 3.57
RSPO4-202ENST00000400634 ABCC3O15438 1527 aa37.32■■■■□ 3.57
RSPO4-202ENST00000400634 FAM50AQ14320 339 aaKnown RBP37.32■■■■□ 3.56
RSPO4-202ENST00000400634 ILDR1Q86SU0 546 aaPredicted RBP37.32■■■■□ 3.56
RSPO4-202ENST00000400634 NCOA1Q15788 1441 aa37.32■■■■□ 3.56
RSPO4-202ENST00000400634 CAMSAP1Q5T5Y3 1602 aa37.32■■■■□ 3.56
RSPO4-202ENST00000400634 MROH1Q8NDA8 1641 aa37.32■■■■□ 3.56
RSPO4-202ENST00000400634 TNRQ92752 1358 aa37.28■■■■□ 3.56
RSPO4-202ENST00000400634 CHIC2Q9UKJ5 165 aa37.27■■■■□ 3.56
RSPO4-202ENST00000400634 PTPRTO14522 1441 aa37.27■■■■□ 3.56
RSPO4-202ENST00000400634 A2ML1A8K2U0 1454 aa37.26■■■■□ 3.56
RSPO4-202ENST00000400634 CEP152O94986 1710 aa37.26■■■■□ 3.56
RSPO4-202ENST00000400634 FBXO31Q5XUX0 539 aaPredicted RBP37.25■■■■□ 3.55
RSPO4-202ENST00000400634 ADGRL2O95490 1459 aa37.25■■■■□ 3.55
RSPO4-202ENST00000400634 PRDM15P57071 1507 aaPredicted RBP37.25■■■■□ 3.55
RSPO4-202ENST00000400634 PLA2R1Q13018 1463 aa37.24■■■■□ 3.55
RSPO4-202ENST00000400634 DEPDC5O75140 1603 aa37.23■■■■□ 3.55
RSPO4-202ENST00000400634 NLRP1Q9C000 1473 aa37.18■■■■□ 3.54
RSPO4-202ENST00000400634 FBXO41Q8TF61 875 aa37.16■■■■□ 3.54
RSPO4-202ENST00000400634 SPATA31D1Q6ZQQ2 1576 aa37.16■■■■□ 3.54
RSPO4-202ENST00000400634 CFAP65Q6ZU64 1925 aaKnown RBP37.16■■■■□ 3.54
RSPO4-202ENST00000400634 PKD2Q13563 968 aa37.15■■■■□ 3.54
RSPO4-202ENST00000400634 KANK1Q14678 1352 aa37.15■■■■□ 3.54
RSPO4-202ENST00000400634 ERVK-7P63135 1459 aa37.11■■■■□ 3.53
RSPO4-202ENST00000400634 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.1■■■■□ 3.53
RSPO4-202ENST00000400634 ARHGAP31Q2M1Z3 1444 aa37.1■■■■□ 3.53
RSPO4-202ENST00000400634 CERKQ8TCT0 537 aa37.09■■■■□ 3.53
RSPO4-202ENST00000400634 NCKAP5LQ9HCH0 1330 aa37.09■■■■□ 3.53
RSPO4-202ENST00000400634 PPARGC1BQ86YN6 1023 aaKnown RBP37.07■■■■□ 3.52
RSPO4-202ENST00000400634 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.06■■■■□ 3.52
RSPO4-202ENST00000400634 UGGT1Q9NYU2 1555 aa37.06■■■■□ 3.52
RSPO4-202ENST00000400634 ANKRD50Q9ULJ7 1429 aa37.06■■■■□ 3.52
RSPO4-202ENST00000400634 POLR1AO95602 1720 aaPredicted RBP37.05■■■■□ 3.52
RSPO4-202ENST00000400634 VWDEQ8N2E2 1590 aa37.04■■■■□ 3.52
RSPO4-202ENST00000400634 THEMISQ8N1K5 641 aaPredicted RBP37.04■■■■□ 3.52
RSPO4-202ENST00000400634 LMTK2Q8IWU2 1503 aa37.03■■■■□ 3.52
RSPO4-202ENST00000400634 ROCK1Q13464 1354 aa37.01■■■■□ 3.51
RSPO4-202ENST00000400634 LTBP4Q8N2S1 1624 aa36.93■■■■□ 3.5
RSPO4-202ENST00000400634 ANKLE2Q86XL3 938 aa36.93■■■■□ 3.5
RSPO4-202ENST00000400634 EFCAB6Q5THR3 1501 aa36.91■■■■□ 3.5
RSPO4-202ENST00000400634 UBR1Q8IWV7 1749 aa36.9■■■■□ 3.5
RSPO4-202ENST00000400634 NEURL4Q96JN8 1562 aa36.9■■■■□ 3.5
RSPO4-202ENST00000400634 ITGAEP38570 1179 aa36.88■■■■□ 3.49
RSPO4-202ENST00000400634 UNC13BO14795 1591 aa36.87■■■■□ 3.49
RSPO4-202ENST00000400634 RRBP1Q9P2E9 1410 aaKnown RBP36.87■■■■□ 3.49
RSPO4-202ENST00000400634 TET3O43151 1660 aa36.84■■■■□ 3.49
RSPO4-202ENST00000400634 IQSEC2Q5JU85 1478 aa36.83■■■■□ 3.49
RSPO4-202ENST00000400634 RPRD2Q5VT52 1461 aaKnown RBP36.83■■■■□ 3.49
RSPO4-202ENST00000400634 MED14O60244 1454 aa36.82■■■■□ 3.49
RSPO4-202ENST00000400634 GCC2Q8IWJ2 1684 aa36.81■■■■□ 3.48
RSPO4-202ENST00000400634 ZNF335Q9H4Z2 1342 aaPredicted RBP36.81■■■■□ 3.48
RSPO4-202ENST00000400634 KDM5AP29375 1690 aaKnown RBP36.8■■■■□ 3.48
RSPO4-202ENST00000400634 PIK3C2BO00750 1634 aa36.79■■■■□ 3.48
RSPO4-202ENST00000400634 IQGAP1P46940 1657 aa36.78■■■■□ 3.48
RSPO4-202ENST00000400634 NPHP4O75161 1426 aaPredicted RBP36.77■■■■□ 3.48
RSPO4-202ENST00000400634 NOS1P29475 1434 aa36.77■■■■□ 3.48
RSPO4-202ENST00000400634 SYNMO15061 1565 aa36.76■■■■□ 3.48
RSPO4-202ENST00000400634 SLIT1O75093 1534 aa36.74■■■■□ 3.47
RSPO4-202ENST00000400634 IQGAP3Q86VI3 1631 aa36.74■■■■□ 3.47
RSPO4-202ENST00000400634 STAG3Q9UJ98 1225 aa36.73■■■■□ 3.47
RSPO4-202ENST00000400634 ARHGAP23Q9P227 1491 aa36.72■■■■□ 3.47
RSPO4-202ENST00000400634 SLC52A1Q9NWF4 448 aa36.71■■■■□ 3.47
RSPO4-202ENST00000400634 SCAF11Q99590 1463 aaKnown RBP36.7■■■■□ 3.47
RSPO4-202ENST00000400634 IDI1Q13907 227 aa36.7■■■■□ 3.47
RSPO4-202ENST00000400634 EID1Q9Y6B2 187 aa36.66■■■■□ 3.46
RSPO4-202ENST00000400634 NUP155O75694 1391 aa36.66■■■■□ 3.46
RSPO4-202ENST00000400634 CPS1P31327 1500 aa36.65■■■■□ 3.46
RSPO4-202ENST00000400634 E9PCH4 1651 aa36.65■■■■□ 3.46
RSPO4-202ENST00000400634 TXNDC2Q86VQ3 553 aa36.64■■■■□ 3.46
RSPO4-202ENST00000400634 TMEM2Q9UHN6 1383 aa36.64■■■■□ 3.46
RSPO4-202ENST00000400634 ADGRB3O60242 1522 aa36.64■■■■□ 3.46
RSPO4-202ENST00000400634 LTKP29376 864 aa36.59■■■■□ 3.45
RSPO4-202ENST00000400634 NAIPQ13075 1403 aa36.54■■■■□ 3.44
RSPO4-202ENST00000400634 MYO5BQ9ULV0 1848 aa36.52■■■■□ 3.44
RSPO4-202ENST00000400634 HFM1A2PYH4 1435 aa36.49■■■■□ 3.43
RSPO4-202ENST00000400634 TMEM131LA2VDJ0 1609 aa36.48■■■■□ 3.43
RSPO4-202ENST00000400634 STRCP1A6NGW2 1772 aa36.46■■■■□ 3.43
RSPO4-202ENST00000400634 UBAP1LF5GYI3 381 aa36.45■■■■□ 3.43
RSPO4-202ENST00000400634 SPHKAPQ2M3C7 1700 aa36.44■■■■□ 3.42
RSPO4-202ENST00000400634 HDGFP51858 240 aaKnown RBP36.43■■■■□ 3.42
RSPO4-202ENST00000400634 ZFYVE9O95405 1425 aa36.39■■■■□ 3.42
RSPO4-202ENST00000400634 CHGAP10645 457 aaKnown RBP36.37■■■■□ 3.41
RSPO4-202ENST00000400634 RIMS2Q9UQ26 1411 aa36.36■■■■□ 3.41
RSPO4-202ENST00000400634 LRRC7Q96NW7 1537 aa36.35■■■■□ 3.41
RSPO4-202ENST00000400634 TOM1O60784 492 aa36.34■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms