RNA–Protein interactions for RNA: ENST00000400318.6

LSM14B-205, Transcript of LSM family member 14B, humanhuman

TSL 1 (best)

Gene LSM14B, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14B-205ENST00000400318 CERKQ8TCT0 537 aa41.06■■■■■ 4.16
LSM14B-205ENST00000400318 PTPRTO14522 1441 aa41.06■■■■■ 4.16
LSM14B-205ENST00000400318 CAMSAP1Q5T5Y3 1602 aa41.04■■■■■ 4.16
LSM14B-205ENST00000400318 PTPN23Q9H3S7 1636 aa41.01■■■■■ 4.16
LSM14B-205ENST00000400318 ZNF142P52746 1687 aaPredicted RBP41.01■■■■■ 4.15
LSM14B-205ENST00000400318 CEP170BQ9Y4F5 1589 aaPredicted RBP41■■■■■ 4.15
LSM14B-205ENST00000400318 PZPP20742 1482 aa40.98■■■■■ 4.15
LSM14B-205ENST00000400318 FGD6Q6ZV73 1430 aa40.98■■■■■ 4.15
LSM14B-205ENST00000400318 ABCC5O15440 1437 aa40.94■■■■■ 4.14
LSM14B-205ENST00000400318 RNF17Q9BXT8 1623 aaKnown RBP40.94■■■■■ 4.14
LSM14B-205ENST00000400318 FBXO31Q5XUX0 539 aaPredicted RBP40.94■■■■■ 4.14
LSM14B-205ENST00000400318 TNRQ92752 1358 aa40.94■■■■■ 4.14
LSM14B-205ENST00000400318 SHANK2Q9UPX8 1470 aa40.94■■■■■ 4.14
LSM14B-205ENST00000400318 EIF2AK4Q9P2K8 1649 aaKnown RBP40.93■■■■■ 4.14
LSM14B-205ENST00000400318 DUOX2Q9NRD8 1548 aa40.92■■■■■ 4.14
LSM14B-205ENST00000400318 A2ML1A8K2U0 1454 aa40.91■■■■■ 4.14
LSM14B-205ENST00000400318 PLA2R1Q13018 1463 aa40.91■■■■■ 4.14
LSM14B-205ENST00000400318 TCOF1Q13428 1488 aaKnown RBP40.9■■■■■ 4.14
LSM14B-205ENST00000400318 NCKAP5LQ9HCH0 1330 aa40.9■■■■■ 4.14
LSM14B-205ENST00000400318 KIF15Q9NS87 1388 aa40.89■■■■■ 4.14
LSM14B-205ENST00000400318 CROCC2H7BZ55 1655 aa40.88■■■■■ 4.14
LSM14B-205ENST00000400318 DAPK1P53355 1430 aa40.88■■■■■ 4.13
LSM14B-205ENST00000400318 PKD2Q13563 968 aa40.86■■■■■ 4.13
LSM14B-205ENST00000400318 ABCC3O15438 1527 aa40.85■■■■■ 4.13
LSM14B-205ENST00000400318 DNMT1P26358 1616 aaKnown RBP40.85■■■■■ 4.13
LSM14B-205ENST00000400318 RRP7BPQ9NSQ0 103 aa40.84■■■■■ 4.13
LSM14B-205ENST00000400318 ZC3H13Q5T200 1668 aaKnown RBP40.82■■■■■ 4.13
LSM14B-205ENST00000400318 ERBINQ96RT1 1412 aa40.79■■■■■ 4.12
LSM14B-205ENST00000400318 MROH1Q8NDA8 1641 aa40.78■■■■■ 4.12
LSM14B-205ENST00000400318 CHIC2Q9UKJ5 165 aa40.75■■■■■ 4.11
LSM14B-205ENST00000400318 NLRP1Q9C000 1473 aa40.75■■■■■ 4.11
LSM14B-205ENST00000400318 ANKRD30AQ9BXX3 1397 aa40.74■■■■■ 4.11
LSM14B-205ENST00000400318 LTBP4Q8N2S1 1624 aa40.71■■■■■ 4.11
LSM14B-205ENST00000400318 FAM50AQ14320 339 aaKnown RBP40.71■■■■■ 4.11
LSM14B-205ENST00000400318 PRDM15P57071 1507 aaPredicted RBP40.67■■■■■ 4.1
LSM14B-205ENST00000400318 THEMISQ8N1K5 641 aaPredicted RBP40.67■■■■■ 4.1
LSM14B-205ENST00000400318 CEP152O94986 1710 aa40.67■■■■■ 4.1
LSM14B-205ENST00000400318 SPATA31D1Q6ZQQ2 1576 aa40.66■■■■■ 4.1
LSM14B-205ENST00000400318 ERVK-7P63135 1459 aa40.66■■■■■ 4.1
LSM14B-205ENST00000400318 GRWD1Q9BQ67 446 aaKnown RBP eCLIP40.65■■■■■ 4.13e-8■■□□□ 13.3
LSM14B-205ENST00000400318 UGGT1Q9NYU2 1555 aa40.65■■■■■ 4.1
LSM14B-205ENST00000400318 ZNF335Q9H4Z2 1342 aaPredicted RBP40.64■■■■■ 4.1
LSM14B-205ENST00000400318 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.62■■■■■ 4.09
LSM14B-205ENST00000400318 KANK1Q14678 1352 aa40.61■■■■■ 4.09
LSM14B-205ENST00000400318 ANKLE2Q86XL3 938 aa40.59■■■■■ 4.09
LSM14B-205ENST00000400318 ADGRL2O95490 1459 aa40.58■■■■■ 4.09
LSM14B-205ENST00000400318 IQSEC2Q5JU85 1478 aa40.58■■■■■ 4.09
LSM14B-205ENST00000400318 DEPDC5O75140 1603 aa40.57■■■■■ 4.09
LSM14B-205ENST00000400318 POLR1AO95602 1720 aaPredicted RBP40.57■■■■■ 4.09
LSM14B-205ENST00000400318 ARHGAP31Q2M1Z3 1444 aa40.56■■■■■ 4.08
LSM14B-205ENST00000400318 NEURL4Q96JN8 1562 aa40.54■■■■■ 4.08
LSM14B-205ENST00000400318 CFAP65Q6ZU64 1925 aaKnown RBP40.46■■■■■ 4.07
LSM14B-205ENST00000400318 NPHP4O75161 1426 aaPredicted RBP40.43■■■■■ 4.06
LSM14B-205ENST00000400318 ANKRD50Q9ULJ7 1429 aa40.43■■■■■ 4.06
LSM14B-205ENST00000400318 LMTK2Q8IWU2 1503 aa40.43■■■■■ 4.06
LSM14B-205ENST00000400318 MED14O60244 1454 aa40.42■■■■■ 4.06
LSM14B-205ENST00000400318 VWDEQ8N2E2 1590 aa40.42■■■■■ 4.06
LSM14B-205ENST00000400318 UBR1Q8IWV7 1749 aa40.37■■■■■ 4.05
LSM14B-205ENST00000400318 PPARGC1BQ86YN6 1023 aaKnown RBP40.37■■■■■ 4.05
LSM14B-205ENST00000400318 IQGAP1P46940 1657 aa40.32■■■■■ 4.05
LSM14B-205ENST00000400318 CPS1P31327 1500 aa40.32■■■■■ 4.04
LSM14B-205ENST00000400318 EFCAB6Q5THR3 1501 aa40.32■■■■■ 4.04
LSM14B-205ENST00000400318 UBAP1LF5GYI3 381 aa40.3■■■■■ 4.04
LSM14B-205ENST00000400318 STAG3Q9UJ98 1225 aa40.29■■■■■ 4.04
LSM14B-205ENST00000400318 SCAF11Q99590 1463 aaKnown RBP40.28■■■■■ 4.04
LSM14B-205ENST00000400318 ROCK1Q13464 1354 aa40.28■■■■■ 4.04
LSM14B-205ENST00000400318 PIK3C2BO00750 1634 aa40.26■■■■■ 4.04
LSM14B-205ENST00000400318 SLIT1O75093 1534 aa40.25■■■■■ 4.03
LSM14B-205ENST00000400318 ARHGAP23Q9P227 1491 aa40.25■■■■■ 4.03
LSM14B-205ENST00000400318 ITGAEP38570 1179 aa40.24■■■■■ 4.03
LSM14B-205ENST00000400318 TXNDC2Q86VQ3 553 aa40.24■■■■■ 4.03
LSM14B-205ENST00000400318 EID1Q9Y6B2 187 aa40.23■■■■■ 4.03
LSM14B-205ENST00000400318 NOS1P29475 1434 aa40.23■■■■■ 4.03
LSM14B-205ENST00000400318 IDI1Q13907 227 aa40.22■■■■■ 4.03
LSM14B-205ENST00000400318 LTKP29376 864 aa40.21■■■■■ 4.03
LSM14B-205ENST00000400318 SYNMO15061 1565 aa40.2■■■■■ 4.03
LSM14B-205ENST00000400318 RPRD2Q5VT52 1461 aaKnown RBP40.19■■■■■ 4.03
LSM14B-205ENST00000400318 TMEM2Q9UHN6 1383 aa40.18■■■■■ 4.02
LSM14B-205ENST00000400318 UNC13BO14795 1591 aa40.16■■■■■ 4.02
LSM14B-205ENST00000400318 SLC52A1Q9NWF4 448 aa40.15■■■■■ 4.02
LSM14B-205ENST00000400318 TET3O43151 1660 aa40.15■■■■■ 4.02
LSM14B-205ENST00000400318 KDM5AP29375 1690 aaKnown RBP40.15■■■■■ 4.02
LSM14B-205ENST00000400318 ADGRB3O60242 1522 aa40.08■■■■■ 4.01
LSM14B-205ENST00000400318 TOM1O60784 492 aa40.08■■■■■ 4.01
LSM14B-205ENST00000400318 GCC2Q8IWJ2 1684 aa40.06■■■■■ 4
LSM14B-205ENST00000400318 SCAF1Q9H7N4 1312 aaKnown RBP40.04■■■■■ 4
LSM14B-205ENST00000400318 NUP155O75694 1391 aa40.01■■■■■ 4
LSM14B-205ENST00000400318 PIP4K2BP78356 416 aa40.01■■■■■ 4
LSM14B-205ENST00000400318 IQGAP3Q86VI3 1631 aa40.01■■■■■ 4
LSM14B-205ENST00000400318 RRBP1Q9P2E9 1410 aaKnown RBP40■■■■□ 3.99
LSM14B-205ENST00000400318 STRCP1A6NGW2 1772 aa40■■■■□ 3.99
LSM14B-205ENST00000400318 LRRC7Q96NW7 1537 aa40■■■■□ 3.99
LSM14B-205ENST00000400318 E9PCH4 1651 aa39.95■■■■□ 3.99
LSM14B-205ENST00000400318 DISP3Q9P2K9 1392 aa39.95■■■■□ 3.99
LSM14B-205ENST00000400318 BCANQ96GW7 911 aa39.89■■■■□ 3.98
LSM14B-205ENST00000400318 CHGAP10645 457 aaKnown RBP39.88■■■■□ 3.97
LSM14B-205ENST00000400318 SLC26A8Q96RN1 970 aa39.88■■■■□ 3.97
LSM14B-205ENST00000400318 HDGFP51858 240 aaKnown RBP39.87■■■■□ 3.97
LSM14B-205ENST00000400318 RIMS2Q9UQ26 1411 aa39.85■■■■□ 3.97
LSM14B-205ENST00000400318 TMEM131LA2VDJ0 1609 aa39.85■■■■□ 3.97
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms