RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 PLEKHH2Q8IVE3 1493 aa18.46■□□□□ 0.55
GABPA-202ENST00000400075 LMOD3Q0VAK6 560 aa18.46■□□□□ 0.54
GABPA-202ENST00000400075 MAGI1Q96QZ7 1491 aaPredicted RBP18.45■□□□□ 0.54
GABPA-202ENST00000400075 FGD6Q6ZV73 1430 aa18.45■□□□□ 0.54
GABPA-202ENST00000400075 ESCO1Q5FWF5 840 aa18.44■□□□□ 0.54
GABPA-202ENST00000400075 CGNL1Q0VF96 1302 aa18.44■□□□□ 0.54
GABPA-202ENST00000400075 TEFQ10587 303 aa18.44■□□□□ 0.54
GABPA-202ENST00000400075 TAF7LQ5H9L4 462 aa18.44■□□□□ 0.54
GABPA-202ENST00000400075 IPO8O15397 1037 aaKnown RBP18.44■□□□□ 0.54
GABPA-202ENST00000400075 TROQ12816 1431 aaPredicted RBP18.43■□□□□ 0.54
GABPA-202ENST00000400075 KCNJ4P48050 445 aa18.43■□□□□ 0.54
GABPA-202ENST00000400075 DCAF8L1A6NGE4 600 aa18.42■□□□□ 0.54
GABPA-202ENST00000400075 SLC26A8Q96RN1 970 aa18.42■□□□□ 0.54
GABPA-202ENST00000400075 SYNJ1O43426 1573 aa18.42■□□□□ 0.54
GABPA-202ENST00000400075 CENPJQ9HC77 1338 aaPredicted RBP18.42■□□□□ 0.54
GABPA-202ENST00000400075 FGD1P98174 961 aa18.42■□□□□ 0.54
GABPA-202ENST00000400075 GPRASP1Q5JY77 1395 aa18.42■□□□□ 0.54
GABPA-202ENST00000400075 HDAC5Q9UQL6 1122 aa18.42■□□□□ 0.54
GABPA-202ENST00000400075 TMEM132EQ6IEE7 984 aa18.42■□□□□ 0.54
GABPA-202ENST00000400075 ISY1Q9ULR0 285 aaKnown RBP18.42■□□□□ 0.54
GABPA-202ENST00000400075 CHMP3Q9Y3E7 222 aa18.41■□□□□ 0.54
GABPA-202ENST00000400075 EIF5BO60841 1220 aaKnown RBP18.41■□□□□ 0.54
GABPA-202ENST00000400075 ABCA10Q8WWZ4 1543 aa18.41■□□□□ 0.54
GABPA-202ENST00000400075 RAPGEF4Q8WZA2 1011 aa18.4■□□□□ 0.54
GABPA-202ENST00000400075 NUTM2BA6NNL0 878 aaPredicted RBP18.4■□□□□ 0.54
GABPA-202ENST00000400075 NUTM2EB1AL46 878 aaPredicted RBP18.4■□□□□ 0.54
GABPA-202ENST00000400075 NLRP6P59044 892 aa18.4■□□□□ 0.54
GABPA-202ENST00000400075 NUTM2AQ8IVF1 878 aaPredicted RBP18.4■□□□□ 0.54
GABPA-202ENST00000400075 NLRP2Q9NX02 1062 aa18.4■□□□□ 0.54
GABPA-202ENST00000400075 FYCO1Q9BQS8 1478 aa18.4■□□□□ 0.54
GABPA-202ENST00000400075 NCOA2Q15596 1464 aa18.4■□□□□ 0.54
GABPA-202ENST00000400075 SF3B2Q13435 895 aaKnown RBP18.4■□□□□ 0.54
GABPA-202ENST00000400075 TTC5Q8N0Z6 440 aa18.39■□□□□ 0.53
GABPA-202ENST00000400075 NUTM2GQ5VZR2 741 aa18.37■□□□□ 0.53
GABPA-202ENST00000400075 ANP32BQ92688 251 aaKnown RBP18.37■□□□□ 0.53
GABPA-202ENST00000400075 USP35Q9P2H5 1018 aa18.37■□□□□ 0.53
GABPA-202ENST00000400075 DMRT2Q9Y5R5 561 aa18.37■□□□□ 0.53
GABPA-202ENST00000400075 KLHL34Q8N239 644 aa18.37■□□□□ 0.53
GABPA-202ENST00000400075 TOP2BQ02880 1626 aa18.37■□□□□ 0.53
GABPA-202ENST00000400075 GRIN2AQ12879 1464 aa18.37■□□□□ 0.53
GABPA-202ENST00000400075 GORABQ5T7V8 394 aa18.37■□□□□ 0.53
GABPA-202ENST00000400075 PANK3Q9H999 370 aa18.37■□□□□ 0.53
GABPA-202ENST00000400075 ZNF608Q9ULD9 1512 aaPredicted RBP18.36■□□□□ 0.53
GABPA-202ENST00000400075 TAOK2Q9UL54 1235 aa18.34■□□□□ 0.53
GABPA-202ENST00000400075 NLRP13Q86W25 1043 aa18.34■□□□□ 0.53
GABPA-202ENST00000400075 ERICH3Q5RHP9 1530 aa18.33■□□□□ 0.53
GABPA-202ENST00000400075 LRRC9Q6ZRR7 1453 aa18.33■□□□□ 0.53
GABPA-202ENST00000400075 ABTB2Q8N961 1025 aa18.33■□□□□ 0.53
GABPA-202ENST00000400075 PHLDB1Q86UU1 1377 aa18.33■□□□□ 0.52
GABPA-202ENST00000400075 CDK11BP21127 795 aaKnown RBP18.33■□□□□ 0.52
GABPA-202ENST00000400075 URB2Q14146 1524 aaKnown RBP18.32■□□□□ 0.52
GABPA-202ENST00000400075 FRAT2O75474 233 aaPredicted RBP18.32■□□□□ 0.52
GABPA-202ENST00000400075 EFCAB5A4FU69 1503 aa18.32■□□□□ 0.52
GABPA-202ENST00000400075 NAP1L2Q9ULW6 460 aaPredicted RBP18.31■□□□□ 0.52
GABPA-202ENST00000400075 CFAP70Q5T0N1 1121 aa18.31■□□□□ 0.52
GABPA-202ENST00000400075 SUPT16HQ9Y5B9 1047 aaKnown RBP18.3■□□□□ 0.52
GABPA-202ENST00000400075 PRXQ9BXM0 1461 aa18.3■□□□□ 0.52
GABPA-202ENST00000400075 APBB1O00213 710 aa18.3■□□□□ 0.52
GABPA-202ENST00000400075 PMFBP1Q8TBY8 1022 aa18.3■□□□□ 0.52
GABPA-202ENST00000400075 C9orf84Q5VXU9 1444 aa18.3■□□□□ 0.52
GABPA-202ENST00000400075 SLC4A10Q6U841 1118 aa18.3■□□□□ 0.52
GABPA-202ENST00000400075 STRN4Q9NRL3 753 aa18.3■□□□□ 0.52
GABPA-202ENST00000400075 TULP1O00294 542 aaPredicted RBP18.29■□□□□ 0.52
GABPA-202ENST00000400075 CEBPAP49715 358 aaPredicted RBP18.28■□□□□ 0.52
GABPA-202ENST00000400075 RGS3P49796 1198 aa18.28■□□□□ 0.52
GABPA-202ENST00000400075 CABP2Q9NPB3 220 aa18.28■□□□□ 0.52
GABPA-202ENST00000400075 CCDC146Q8IYE0 955 aa18.27■□□□□ 0.52
GABPA-202ENST00000400075 IQGAP2Q13576 1575 aa18.27■□□□□ 0.51
GABPA-202ENST00000400075 KIF21BO75037 1637 aa18.26■□□□□ 0.51
GABPA-202ENST00000400075 PRAM1Q96QH2 718 aa18.26■□□□□ 0.51
GABPA-202ENST00000400075 MIA2Q96PC5 1412 aa18.26■□□□□ 0.51
GABPA-202ENST00000400075 DIAPH1O60610 1272 aaKnown RBP18.25■□□□□ 0.51
GABPA-202ENST00000400075 NGEFQ8N5V2 710 aa18.25■□□□□ 0.51
GABPA-202ENST00000400075 USP47Q96K76 1375 aa18.25■□□□□ 0.51
GABPA-202ENST00000400075 RRBP1Q9P2E9 1410 aaKnown RBP18.25■□□□□ 0.51
GABPA-202ENST00000400075 SMC4Q9NTJ3 1288 aa18.25■□□□□ 0.51
GABPA-202ENST00000400075 ARAP1Q96P48 1450 aa18.24■□□□□ 0.51
GABPA-202ENST00000400075 NCLP19338 710 aaKnown RBP18.24■□□□□ 0.51
GABPA-202ENST00000400075 PRDM11Q9NQV5 511 aa18.24■□□□□ 0.51
GABPA-202ENST00000400075 CCER2I3L3R5 266 aa18.24■□□□□ 0.51
GABPA-202ENST00000400075 PLB1Q6P1J6 1458 aa18.23■□□□□ 0.51
GABPA-202ENST00000400075 BECN1Q14457 450 aa18.23■□□□□ 0.51
GABPA-202ENST00000400075 ITPRIPQ8IWB1 547 aa18.22■□□□□ 0.51
GABPA-202ENST00000400075 ADGRL1O94910 1474 aa18.22■□□□□ 0.51
GABPA-202ENST00000400075 GGNBP2Q9H3C7 697 aa18.21■□□□□ 0.51
GABPA-202ENST00000400075 ELL2O00472 640 aaPredicted RBP18.21■□□□□ 0.51
GABPA-202ENST00000400075 NEXNQ0ZGT2 675 aa18.21■□□□□ 0.51
GABPA-202ENST00000400075 AKNAQ7Z591 1439 aa18.21■□□□□ 0.51
GABPA-202ENST00000400075 RRP7AQ9Y3A4 280 aaKnown RBP18.21■□□□□ 0.51
GABPA-202ENST00000400075 DENND4BO75064 1496 aaPredicted RBP18.2■□□□□ 0.5
GABPA-202ENST00000400075 ZRSR1Q15695 479 aaKnown RBP18.2■□□□□ 0.5
GABPA-202ENST00000400075 EIF2S2P20042 333 aaKnown RBP18.2■□□□□ 0.5
GABPA-202ENST00000400075 HECW1Q76N89 1606 aa18.19■□□□□ 0.5
GABPA-202ENST00000400075 PPP6R1Q9UPN7 881 aa18.19■□□□□ 0.5
GABPA-202ENST00000400075 HMMRO75330 724 aa18.19■□□□□ 0.5
GABPA-202ENST00000400075 TOM1L2Q6ZVM7 507 aa18.18■□□□□ 0.5
GABPA-202ENST00000400075 HFM1A2PYH4 1435 aa18.18■□□□□ 0.5
GABPA-202ENST00000400075 ARHGEF11O15085 1522 aa18.17■□□□□ 0.5
GABPA-202ENST00000400075 RPGRIP1LQ68CZ1 1315 aa18.17■□□□□ 0.5
GABPA-202ENST00000400075 KIAA1211Q6ZU35 1233 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 409.5 ms