RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 MCCP23508 829 aa17.48■□□□□ 0.39
CACNA1C-211ENST00000399617 SMC4Q9NTJ3 1288 aa17.48■□□□□ 0.39
CACNA1C-211ENST00000399617 DRC7Q8IY82 874 aa17.46■□□□□ 0.38
CACNA1C-211ENST00000399617 MROH2BQ7Z745 1585 aa17.45■□□□□ 0.38
CACNA1C-211ENST00000399617 RTN4Q9NQC3 1192 aaKnown RBP17.45■□□□□ 0.38
CACNA1C-211ENST00000399617 RASSF8Q8NHQ8 419 aa17.44■□□□□ 0.38
CACNA1C-211ENST00000399617 BCL2L13Q9BXK5 485 aa17.44■□□□□ 0.38
CACNA1C-211ENST00000399617 STRN4Q9NRL3 753 aa17.44■□□□□ 0.38
CACNA1C-211ENST00000399617 DCAF8L1A6NGE4 600 aa17.44■□□□□ 0.38
CACNA1C-211ENST00000399617 FOXD4L5Q5VV16 416 aaPredicted RBP17.43■□□□□ 0.38
CACNA1C-211ENST00000399617 HSCBQ8IWL3 235 aa17.43■□□□□ 0.38
CACNA1C-211ENST00000399617 FOXD4L4Q8WXT5 416 aaPredicted RBP17.43■□□□□ 0.38
CACNA1C-211ENST00000399617 COG3Q96JB2 828 aa17.43■□□□□ 0.38
CACNA1C-211ENST00000399617 MARCH6O60337 910 aa17.43■□□□□ 0.38
CACNA1C-211ENST00000399617 SETD5Q9C0A6 1442 aa17.43■□□□□ 0.38
CACNA1C-211ENST00000399617 CWC22Q9HCG8 908 aaKnown RBP17.43■□□□□ 0.38
CACNA1C-211ENST00000399617 TTC5Q8N0Z6 440 aa17.43■□□□□ 0.38
CACNA1C-211ENST00000399617 PTPRGP23470 1445 aa17.41■□□□□ 0.38
CACNA1C-211ENST00000399617 IPO8O15397 1037 aaKnown RBP17.41■□□□□ 0.38
CACNA1C-211ENST00000399617 TRIM34Q9BYJ4 488 aa17.41■□□□□ 0.38
CACNA1C-211ENST00000399617 CTDP1Q9Y5B0 961 aaPredicted RBP17.39■□□□□ 0.37
CACNA1C-211ENST00000399617 TEFQ10587 303 aa17.38■□□□□ 0.37
CACNA1C-211ENST00000399617 MFAP1P55081 439 aaKnown RBP17.38■□□□□ 0.37
CACNA1C-211ENST00000399617 NLRP2Q9NX02 1062 aa17.37■□□□□ 0.37
CACNA1C-211ENST00000399617 EIF3AQ14152 1382 aaKnown RBP17.37■□□□□ 0.37
CACNA1C-211ENST00000399617 FYB1O15117 783 aa17.37■□□□□ 0.37
CACNA1C-211ENST00000399617 L3MBTL2Q969R5 705 aa17.37■□□□□ 0.37
CACNA1C-211ENST00000399617 GOLGA6L6A8MZA4 724 aa17.36■□□□□ 0.37
CACNA1C-211ENST00000399617 CALD1Q05682 793 aaKnown RBP17.36■□□□□ 0.37
CACNA1C-211ENST00000399617 FBXO3Q9UK99 471 aa17.36■□□□□ 0.37
CACNA1C-211ENST00000399617 MTMR7Q9Y216 660 aa17.36■□□□□ 0.37
CACNA1C-211ENST00000399617 CADPSQ9ULU8 1353 aa17.35■□□□□ 0.37
CACNA1C-211ENST00000399617 AIMP1Q12904 312 aaKnown RBP17.35■□□□□ 0.37
CACNA1C-211ENST00000399617 ESCO1Q5FWF5 840 aa17.35■□□□□ 0.37
CACNA1C-211ENST00000399617 VPS37DQ86XT2 251 aa17.35■□□□□ 0.37
CACNA1C-211ENST00000399617 GPATCH3Q96I76 525 aa17.35■□□□□ 0.37
CACNA1C-211ENST00000399617 PLIN1O60240 522 aa17.34■□□□□ 0.37
CACNA1C-211ENST00000399617 RILPL2Q969X0 211 aa17.34■□□□□ 0.37
CACNA1C-211ENST00000399617 PPP4R2Q9NY27 417 aa17.34■□□□□ 0.37
CACNA1C-211ENST00000399617 SF3B2Q13435 895 aaKnown RBP17.34■□□□□ 0.37
CACNA1C-211ENST00000399617 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.33■□□□□ 0.37
CACNA1C-211ENST00000399617 RAB3GAP2Q9H2M9 1393 aa17.33■□□□□ 0.37
CACNA1C-211ENST00000399617 PANK3Q9H999 370 aa17.33■□□□□ 0.36
CACNA1C-211ENST00000399617 KDM4AO75164 1064 aa17.32■□□□□ 0.36
CACNA1C-211ENST00000399617 SLC4A3P48751 1232 aa17.32■□□□□ 0.36
CACNA1C-211ENST00000399617 TMEM132EQ6IEE7 984 aa17.32■□□□□ 0.36
CACNA1C-211ENST00000399617 FOXD4L6Q3SYB3 417 aaPredicted RBP17.32■□□□□ 0.36
CACNA1C-211ENST00000399617 FOXD4L3Q6VB84 417 aaPredicted RBP17.32■□□□□ 0.36
CACNA1C-211ENST00000399617 PROSER2Q86WR7 435 aaPredicted RBP17.31■□□□□ 0.36
CACNA1C-211ENST00000399617 PMFBP1Q8TBY8 1022 aa17.31■□□□□ 0.36
CACNA1C-211ENST00000399617 WIZO95785 1651 aa17.31■□□□□ 0.36
CACNA1C-211ENST00000399617 DHX16O60231 1041 aaKnown RBP17.31■□□□□ 0.36
CACNA1C-211ENST00000399617 HMOX1P09601 288 aa17.31■□□□□ 0.36
CACNA1C-211ENST00000399617 GZF1Q9H116 711 aaPredicted RBP17.31■□□□□ 0.36
CACNA1C-211ENST00000399617 XPCQ01831 940 aaPredicted RBP17.31■□□□□ 0.36
CACNA1C-211ENST00000399617 RBM42Q9BTD8 480 aaKnown RBP17.31■□□□□ 0.36
CACNA1C-211ENST00000399617 KRI1Q8N9T8 703 aaKnown RBP17.3■□□□□ 0.36
CACNA1C-211ENST00000399617 FMN1Q68DA7 1419 aa17.29■□□□□ 0.36
CACNA1C-211ENST00000399617 VGFO15240 615 aaPredicted RBP17.29■□□□□ 0.36
CACNA1C-211ENST00000399617 L1TD1Q5T7N2 865 aaKnown RBP17.29■□□□□ 0.36
CACNA1C-211ENST00000399617 ST20-MTHFSA0A0A6YYL1 179 aa17.29■□□□□ 0.36
CACNA1C-211ENST00000399617 SLKQ9H2G2 1235 aaPredicted RBP17.29■□□□□ 0.36
CACNA1C-211ENST00000399617 FANCD2Q9BXW9 1451 aa17.28■□□□□ 0.36
CACNA1C-211ENST00000399617 APPP05067 770 aa17.28■□□□□ 0.36
CACNA1C-211ENST00000399617 CNKSR2Q8WXI2 1034 aa17.28■□□□□ 0.36
CACNA1C-211ENST00000399617 CABP2Q9NPB3 220 aa17.28■□□□□ 0.36
CACNA1C-211ENST00000399617 RBM33Q96EV2 1170 aaKnown RBP17.28■□□□□ 0.36
CACNA1C-211ENST00000399617 RCAN3Q9UKA8 241 aa17.28■□□□□ 0.36
CACNA1C-211ENST00000399617 NOL10Q9BSC4 688 aaKnown RBP17.27■□□□□ 0.36
CACNA1C-211ENST00000399617 TCEAL9Q9UHQ7 104 aa17.27■□□□□ 0.35
CACNA1C-211ENST00000399617 NAP1L5Q96NT1 182 aaPredicted RBP17.26■□□□□ 0.35
CACNA1C-211ENST00000399617 ARID3AQ99856 593 aa17.26■□□□□ 0.35
CACNA1C-211ENST00000399617 C9orf78Q9NZ63 289 aaPredicted RBP17.25■□□□□ 0.35
CACNA1C-211ENST00000399617 ZNF644Q9H582 1327 aaPredicted RBP17.25■□□□□ 0.35
CACNA1C-211ENST00000399617 PES1O00541 588 aaKnown RBP17.25■□□□□ 0.35
CACNA1C-211ENST00000399617 FOSBP53539 338 aa17.25■□□□□ 0.35
CACNA1C-211ENST00000399617 AQRO60306 1485 aaKnown RBP eCLIP17.25■□□□□ 0.35
CACNA1C-211ENST00000399617 RAPGEF4Q8WZA2 1011 aa17.24■□□□□ 0.35
CACNA1C-211ENST00000399617 RWDD1Q9H446 243 aaPredicted RBP17.24■□□□□ 0.35
CACNA1C-211ENST00000399617 EVC2Q86UK5 1308 aa17.24■□□□□ 0.35
CACNA1C-211ENST00000399617 RAD54L2Q9Y4B4 1467 aa17.23■□□□□ 0.35
CACNA1C-211ENST00000399617 TXNDC2Q86VQ3 553 aa17.23■□□□□ 0.35
CACNA1C-211ENST00000399617 DDX54Q8TDD1 881 aaKnown RBP17.23■□□□□ 0.35
CACNA1C-211ENST00000399617 CCDC18Q5T9S5 1454 aa17.23■□□□□ 0.35
CACNA1C-211ENST00000399617 RAPGEF2Q9Y4G8 1499 aa17.23■□□□□ 0.35
CACNA1C-211ENST00000399617 KIAA2012Q0VF49 1180 aa17.23■□□□□ 0.35
CACNA1C-211ENST00000399617 NOC3LQ8WTT2 800 aaKnown RBP17.23■□□□□ 0.35
CACNA1C-211ENST00000399617 CCDC27Q2M243 656 aa17.23■□□□□ 0.35
CACNA1C-211ENST00000399617 CCDC144AA2RUR9 1427 aa17.22■□□□□ 0.35
CACNA1C-211ENST00000399617 HMMRO75330 724 aa17.22■□□□□ 0.35
CACNA1C-211ENST00000399617 PRDM2Q13029 1718 aa17.21■□□□□ 0.35
CACNA1C-211ENST00000399617 NLRP6P59044 892 aa17.21■□□□□ 0.35
CACNA1C-211ENST00000399617 LMOD3Q0VAK6 560 aa17.21■□□□□ 0.35
CACNA1C-211ENST00000399617 GGNBP2Q9H3C7 697 aa17.21■□□□□ 0.35
CACNA1C-211ENST00000399617 ABTB2Q8N961 1025 aa17.2■□□□□ 0.34
CACNA1C-211ENST00000399617 CENPJQ9HC77 1338 aaPredicted RBP17.19■□□□□ 0.34
CACNA1C-211ENST00000399617 NEXNQ0ZGT2 675 aa17.19■□□□□ 0.34
CACNA1C-211ENST00000399617 ANP32EQ9BTT0 268 aa17.19■□□□□ 0.34
CACNA1C-211ENST00000399617 AFAP1Q8N556 730 aa17.19■□□□□ 0.34
CACNA1C-211ENST00000399617 NRDCO43847 1150 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms