RNA–Protein interactions for RNA: ENST00000399395.7

SDR39U1-201, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR39U1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-201ENST00000399395 TCOF1Q13428 1488 aaKnown RBP28.02■■■□□ 2.08
SDR39U1-201ENST00000399395 LRRC9Q6ZRR7 1453 aa28■■■□□ 2.07
SDR39U1-201ENST00000399395 TSPY4P0CV99 314 aa27.98■■■□□ 2.07
SDR39U1-201ENST00000399395 TSPY10P0CW01 314 aa27.98■■■□□ 2.07
SDR39U1-201ENST00000399395 TNRQ92752 1358 aa27.98■■■□□ 2.07
SDR39U1-201ENST00000399395 PZPP20742 1482 aa27.97■■■□□ 2.07
SDR39U1-201ENST00000399395 DNMT1P26358 1616 aaKnown RBP27.96■■■□□ 2.07
SDR39U1-201ENST00000399395 ZNF335Q9H4Z2 1342 aaPredicted RBP27.96■■■□□ 2.07
SDR39U1-201ENST00000399395 WASHC2CQ9Y4E1 1318 aa27.94■■■□□ 2.06
SDR39U1-201ENST00000399395 DISP3Q9P2K9 1392 aa27.92■■■□□ 2.06
SDR39U1-201ENST00000399395 POLR1AO95602 1720 aaPredicted RBP27.91■■■□□ 2.06
SDR39U1-201ENST00000399395 MAST1Q9Y2H9 1570 aa27.9■■■□□ 2.06
SDR39U1-201ENST00000399395 LOC105371045A0A1W2PR82 267 aa27.9■■■□□ 2.06
SDR39U1-201ENST00000399395 MAP3K1Q13233 1512 aa27.9■■■□□ 2.06
SDR39U1-201ENST00000399395 FBXO31Q5XUX0 539 aaPredicted RBP27.89■■■□□ 2.06
SDR39U1-201ENST00000399395 RNF17Q9BXT8 1623 aaKnown RBP27.87■■■□□ 2.05
SDR39U1-201ENST00000399395 MYOM3Q5VTT5 1437 aa27.85■■■□□ 2.05
SDR39U1-201ENST00000399395 ZC3H13Q5T200 1668 aaKnown RBP27.85■■■□□ 2.05
SDR39U1-201ENST00000399395 NLRP1Q9C000 1473 aa27.85■■■□□ 2.05
SDR39U1-201ENST00000399395 SPATA31D1Q6ZQQ2 1576 aa27.85■■■□□ 2.05
SDR39U1-201ENST00000399395 EIF2AK4Q9P2K8 1649 aaKnown RBP27.85■■■□□ 2.05
SDR39U1-201ENST00000399395 MIA2Q96PC5 1412 aa27.84■■■□□ 2.05
SDR39U1-201ENST00000399395 UBAP1LF5GYI3 381 aa27.83■■■□□ 2.05
SDR39U1-201ENST00000399395 NEURL4Q96JN8 1562 aa27.82■■■□□ 2.04
SDR39U1-201ENST00000399395 KANK4Q5T7N3 995 aaPredicted RBP27.82■■■□□ 2.04
SDR39U1-201ENST00000399395 ABCC3O15438 1527 aa27.82■■■□□ 2.04
SDR39U1-201ENST00000399395 UGGT1Q9NYU2 1555 aa27.81■■■□□ 2.04
SDR39U1-201ENST00000399395 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.78■■■□□ 2.04
SDR39U1-201ENST00000399395 THEMISQ8N1K5 641 aaPredicted RBP27.78■■■□□ 2.04
SDR39U1-201ENST00000399395 ANKLE2Q86XL3 938 aa27.77■■■□□ 2.04
SDR39U1-201ENST00000399395 CPS1P31327 1500 aa27.77■■■□□ 2.04
SDR39U1-201ENST00000399395 DUOX2Q9NRD8 1548 aa27.75■■■□□ 2.03
SDR39U1-201ENST00000399395 MROH1Q8NDA8 1641 aa27.74■■■□□ 2.03
SDR39U1-201ENST00000399395 ERVK-7P63135 1459 aa27.73■■■□□ 2.03
SDR39U1-201ENST00000399395 APLP2Q06481 763 aa27.73■■■□□ 2.03
SDR39U1-201ENST00000399395 DEPDC5O75140 1603 aa27.73■■■□□ 2.03
SDR39U1-201ENST00000399395 CEP152O94986 1710 aa27.72■■■□□ 2.03
SDR39U1-201ENST00000399395 SHANK2Q9UPX8 1470 aa27.72■■■□□ 2.03
SDR39U1-201ENST00000399395 NPHP4O75161 1426 aaPredicted RBP27.71■■■□□ 2.03
SDR39U1-201ENST00000399395 CROCC2H7BZ55 1655 aa27.71■■■□□ 2.03
SDR39U1-201ENST00000399395 PTPN23Q9H3S7 1636 aa27.69■■■□□ 2.02
SDR39U1-201ENST00000399395 KIF15Q9NS87 1388 aa27.69■■■□□ 2.02
SDR39U1-201ENST00000399395 ILDR2Q71H61 639 aa27.68■■■□□ 2.02
SDR39U1-201ENST00000399395 MED14O60244 1454 aa27.68■■■□□ 2.02
SDR39U1-201ENST00000399395 IQGAP1P46940 1657 aa27.67■■■□□ 2.02
SDR39U1-201ENST00000399395 SCAF1Q9H7N4 1312 aaKnown RBP27.67■■■□□ 2.02
SDR39U1-201ENST00000399395 VWDEQ8N2E2 1590 aa27.66■■■□□ 2.02
SDR39U1-201ENST00000399395 ERBINQ96RT1 1412 aa27.66■■■□□ 2.02
SDR39U1-201ENST00000399395 PRDM15P57071 1507 aaPredicted RBP27.65■■■□□ 2.02
SDR39U1-201ENST00000399395 ABCC5O15440 1437 aa27.63■■■□□ 2.01
SDR39U1-201ENST00000399395 CFAP65Q6ZU64 1925 aaKnown RBP27.63■■■□□ 2.01
SDR39U1-201ENST00000399395 TOM1O60784 492 aa27.62■■■□□ 2.01
SDR39U1-201ENST00000399395 DAPK1P53355 1430 aa27.6■■■□□ 2.01
SDR39U1-201ENST00000399395 RRP7BPQ9NSQ0 103 aa27.6■■■□□ 2.01
SDR39U1-201ENST00000399395 FGD6Q6ZV73 1430 aa27.59■■■□□ 2.01
SDR39U1-201ENST00000399395 UBR1Q8IWV7 1749 aa27.59■■■□□ 2.01
SDR39U1-201ENST00000399395 PIP4K2BP78356 416 aa27.59■■■□□ 2.01
SDR39U1-201ENST00000399395 SOCS7O14512 581 aa27.58■■■□□ 2.01
SDR39U1-201ENST00000399395 ARHGAP31Q2M1Z3 1444 aa27.57■■■□□ 2
SDR39U1-201ENST00000399395 KANK1Q14678 1352 aa27.56■■■□□ 2
SDR39U1-201ENST00000399395 SCAF11Q99590 1463 aaKnown RBP27.55■■■□□ 2
SDR39U1-201ENST00000399395 SYNMO15061 1565 aa27.54■■■□□ 2
SDR39U1-201ENST00000399395 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.54■■■□□ 26e-6■□□□□ 8.3
SDR39U1-201ENST00000399395 ANKRD30AQ9BXX3 1397 aa27.53■■■□□ 2
SDR39U1-201ENST00000399395 HSPA1LP34931 641 aa27.51■■□□□ 1.99
SDR39U1-201ENST00000399395 SLIT1O75093 1534 aa27.49■■□□□ 1.99
SDR39U1-201ENST00000399395 STRCP1A6NGW2 1772 aa27.48■■□□□ 1.99
SDR39U1-201ENST00000399395 ARHGAP23Q9P227 1491 aa27.48■■□□□ 1.99
SDR39U1-201ENST00000399395 LRRC7Q96NW7 1537 aa27.47■■□□□ 1.99
SDR39U1-201ENST00000399395 CHIC2Q9UKJ5 165 aa27.47■■□□□ 1.99
SDR39U1-201ENST00000399395 PIK3C2BO00750 1634 aa27.46■■□□□ 1.99
SDR39U1-201ENST00000399395 TXNDC2Q86VQ3 553 aa27.45■■□□□ 1.98
SDR39U1-201ENST00000399395 STAG3Q9UJ98 1225 aa27.45■■□□□ 1.98
SDR39U1-201ENST00000399395 EID1Q9Y6B2 187 aa27.45■■□□□ 1.98
SDR39U1-201ENST00000399395 LMTK2Q8IWU2 1503 aa27.45■■□□□ 1.98
SDR39U1-201ENST00000399395 MED1Q15648 1581 aaPredicted RBP27.43■■□□□ 1.98
SDR39U1-201ENST00000399395 ALKQ9UM73 1620 aa27.42■■□□□ 1.98
SDR39U1-201ENST00000399395 LTKP29376 864 aa27.41■■□□□ 1.98
SDR39U1-201ENST00000399395 EFCAB6Q5THR3 1501 aa27.4■■□□□ 1.98
SDR39U1-201ENST00000399395 KDM5AP29375 1690 aaKnown RBP27.4■■□□□ 1.98
SDR39U1-201ENST00000399395 ADGRL2O95490 1459 aa27.39■■□□□ 1.98
SDR39U1-201ENST00000399395 TMEM2Q9UHN6 1383 aa27.39■■□□□ 1.98
SDR39U1-201ENST00000399395 FAM50AQ14320 339 aaKnown RBP27.37■■□□□ 1.97
SDR39U1-201ENST00000399395 ADGRB3O60242 1522 aa27.33■■□□□ 1.97
SDR39U1-201ENST00000399395 NOS1P29475 1434 aa27.32■■□□□ 1.96
SDR39U1-201ENST00000399395 IDI1Q13907 227 aa27.31■■□□□ 1.96
SDR39U1-201ENST00000399395 SENP3Q9H4L4 574 aaPredicted RBP27.31■■□□□ 1.96
SDR39U1-201ENST00000399395 ANKRD50Q9ULJ7 1429 aa27.3■■□□□ 1.96
SDR39U1-201ENST00000399395 PHF23Q9BUL5 403 aaPredicted RBP27.28■■□□□ 1.96
SDR39U1-201ENST00000399395 RPRD2Q5VT52 1461 aaKnown RBP27.27■■□□□ 1.96
SDR39U1-201ENST00000399395 XIRP1Q702N8 1843 aaKnown RBP27.27■■□□□ 1.96
SDR39U1-201ENST00000399395 TET3O43151 1660 aa27.25■■□□□ 1.95
SDR39U1-201ENST00000399395 SLC52A1Q9NWF4 448 aa27.25■■□□□ 1.95
SDR39U1-201ENST00000399395 GCC2Q8IWJ2 1684 aa27.21■■□□□ 1.95
SDR39U1-201ENST00000399395 BCANQ96GW7 911 aa27.2■■□□□ 1.94
SDR39U1-201ENST00000399395 SLC26A8Q96RN1 970 aa27.2■■□□□ 1.94
SDR39U1-201ENST00000399395 TMEM94Q12767 1356 aa27.2■■□□□ 1.94
SDR39U1-201ENST00000399395 UNC13BO14795 1591 aa27.19■■□□□ 1.94
SDR39U1-201ENST00000399395 KCNA6P17658 529 aa27.19■■□□□ 1.94
SDR39U1-201ENST00000399395 NKTRP30414 1462 aaKnown RBP27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms