RNA–Protein interactions for RNA: ENST00000398399.6

VGLL3-202, Transcript of vestigial like family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VGLL3, Length 10,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3-202ENST00000398399 NLRP13Q86W25 1043 aa16.88■□□□□ 0.29
VGLL3-202ENST00000398399 ANKRD20A12PQ8NF67 263 aa16.88■□□□□ 0.29
VGLL3-202ENST00000398399 REC8O95072 547 aa16.88■□□□□ 0.29
VGLL3-202ENST00000398399 RASSF8Q8NHQ8 419 aa16.88■□□□□ 0.29
VGLL3-202ENST00000398399 DCTN1Q14203 1278 aa16.88■□□□□ 0.29
VGLL3-202ENST00000398399 H3BQV1 296 aa16.87■□□□□ 0.29
VGLL3-202ENST00000398399 LMOD3Q0VAK6 560 aa16.87■□□□□ 0.29
VGLL3-202ENST00000398399 IFFO2Q5TF58 517 aa16.87■□□□□ 0.29
VGLL3-202ENST00000398399 CCAR2Q8N163 923 aaKnown RBP16.87■□□□□ 0.29
VGLL3-202ENST00000398399 RUFY1Q96T51 708 aa16.87■□□□□ 0.29
VGLL3-202ENST00000398399 RAB3GAP2Q9H2M9 1393 aa16.87■□□□□ 0.29
VGLL3-202ENST00000398399 SMC4Q9NTJ3 1288 aa16.87■□□□□ 0.29
VGLL3-202ENST00000398399 TPD52L1Q16890 204 aaPredicted RBP16.87■□□□□ 0.29
VGLL3-202ENST00000398399 CCDC39Q9UFE4 941 aa16.86■□□□□ 0.29
VGLL3-202ENST00000398399 ROCK1Q13464 1354 aa16.86■□□□□ 0.29
VGLL3-202ENST00000398399 HSPA5P11021 654 aaKnown RBP16.86■□□□□ 0.29
VGLL3-202ENST00000398399 HMGN5P82970 282 aaKnown RBP16.85■□□□□ 0.29
VGLL3-202ENST00000398399 STK31Q9BXU1 1019 aa16.85■□□□□ 0.29
VGLL3-202ENST00000398399 PLPPR3Q6T4P5 718 aa16.85■□□□□ 0.29
VGLL3-202ENST00000398399 CGNL1Q0VF96 1302 aa16.84■□□□□ 0.29
VGLL3-202ENST00000398399 AAMPQ13685 434 aa16.84■□□□□ 0.29
VGLL3-202ENST00000398399 SF3A1Q15459 793 aaKnown RBP16.84■□□□□ 0.29
VGLL3-202ENST00000398399 PDE4AP27815 886 aa16.84■□□□□ 0.29
VGLL3-202ENST00000398399 CCDC191Q8NCU4 936 aa16.84■□□□□ 0.29
VGLL3-202ENST00000398399 RDXP35241 583 aaKnown RBP16.84■□□□□ 0.29
VGLL3-202ENST00000398399 ABCC8Q09428 1581 aa16.84■□□□□ 0.29
VGLL3-202ENST00000398399 SMARCA2P51531 1590 aa16.83■□□□□ 0.28
VGLL3-202ENST00000398399 CCDC18Q5T9S5 1454 aa16.83■□□□□ 0.28
VGLL3-202ENST00000398399 NAT10Q9H0A0 1025 aaKnown RBP16.83■□□□□ 0.28
VGLL3-202ENST00000398399 HDGFP51858 240 aaKnown RBP16.82■□□□□ 0.28
VGLL3-202ENST00000398399 HDGFL2Q7Z4V5 671 aaPredicted RBP16.82■□□□□ 0.28
VGLL3-202ENST00000398399 CUX1P39880 1505 aa16.81■□□□□ 0.28
VGLL3-202ENST00000398399 CCP110O43303 1012 aa16.81■□□□□ 0.28
VGLL3-202ENST00000398399 LRRFIP1Q32MZ4 808 aaKnown RBP16.81■□□□□ 0.28
VGLL3-202ENST00000398399 NASPP49321 788 aaPredicted RBP16.81■□□□□ 0.28
VGLL3-202ENST00000398399 MYBBP1AQ9BQG0 1328 aaKnown RBP16.81■□□□□ 0.28
VGLL3-202ENST00000398399 SRPK2P78362 688 aaKnown RBP16.8■□□□□ 0.28
VGLL3-202ENST00000398399 DHX8Q14562 1220 aaKnown RBP16.8■□□□□ 0.28
VGLL3-202ENST00000398399 APBB1O00213 710 aa16.8■□□□□ 0.28
VGLL3-202ENST00000398399 HOMER1Q86YM7 354 aa16.8■□□□□ 0.28
VGLL3-202ENST00000398399 ZNF592Q92610 1267 aa16.8■□□□□ 0.28
VGLL3-202ENST00000398399 RRP9O43818 475 aaKnown RBP16.79■□□□□ 0.28
VGLL3-202ENST00000398399 WIZO95785 1651 aa16.79■□□□□ 0.28
VGLL3-202ENST00000398399 MRE11P49959 708 aa16.79■□□□□ 0.28
VGLL3-202ENST00000398399 ERCC4Q92889 916 aaPredicted RBP16.79■□□□□ 0.28
VGLL3-202ENST00000398399 ISY1Q9ULR0 285 aaKnown RBP16.79■□□□□ 0.28
VGLL3-202ENST00000398399 NUCB2P80303 420 aa16.78■□□□□ 0.28
VGLL3-202ENST00000398399 NGEFQ8N5V2 710 aa16.78■□□□□ 0.28
VGLL3-202ENST00000398399 MYO6Q9UM54 1294 aa16.78■□□□□ 0.28
VGLL3-202ENST00000398399 U2AF1L5P0DN76 240 aaPredicted RBP16.78■□□□□ 0.28
VGLL3-202ENST00000398399 U2AF1Q01081 240 aaKnown RBP eCLIP16.78■□□□□ 0.28
VGLL3-202ENST00000398399 UACAQ9BZF9 1416 aa16.77■□□□□ 0.28
VGLL3-202ENST00000398399 RRP1P56182 461 aaKnown RBP16.77■□□□□ 0.27
VGLL3-202ENST00000398399 PES1O00541 588 aaKnown RBP16.77■□□□□ 0.27
VGLL3-202ENST00000398399 LETM1O95202 739 aaPredicted RBP16.76■□□□□ 0.27
VGLL3-202ENST00000398399 GORABQ5T7V8 394 aa16.76■□□□□ 0.27
VGLL3-202ENST00000398399 CREBRFQ8IUR6 639 aa16.76■□□□□ 0.27
VGLL3-202ENST00000398399 CHMP5Q9NZZ3 219 aa16.76■□□□□ 0.27
VGLL3-202ENST00000398399 H0YHG0 523 aa16.75■□□□□ 0.27
VGLL3-202ENST00000398399 FAM184AQ8NB25 1140 aa16.74■□□□□ 0.27
VGLL3-202ENST00000398399 MNS1Q8NEH6 495 aa16.74■□□□□ 0.27
VGLL3-202ENST00000398399 IFT57Q9NWB7 429 aa16.74■□□□□ 0.27
VGLL3-202ENST00000398399 KIF7Q2M1P5 1343 aa16.74■□□□□ 0.27
VGLL3-202ENST00000398399 LEKR1Q6ZMV7 388 aa16.74■□□□□ 0.27
VGLL3-202ENST00000398399 ANKRD30AQ9BXX3 1397 aa16.74■□□□□ 0.27
VGLL3-202ENST00000398399 RUFY2Q8WXA3 655 aa16.73■□□□□ 0.27
VGLL3-202ENST00000398399 E9PSI1 815 aa16.73■□□□□ 0.27
VGLL3-202ENST00000398399 PRM3Q9NNZ6 103 aa16.73■□□□□ 0.27
VGLL3-202ENST00000398399 PATL2C9JE40 543 aaKnown RBP16.72■□□□□ 0.27
VGLL3-202ENST00000398399 TOP2AP11388 1531 aaKnown RBP16.72■□□□□ 0.27
VGLL3-202ENST00000398399 TERF2IPQ9NYB0 399 aa16.72■□□□□ 0.27
VGLL3-202ENST00000398399 NCBP3Q53F19 620 aaKnown RBP16.71■□□□□ 0.27
VGLL3-202ENST00000398399 CCDC173Q0VFZ6 552 aa16.7■□□□□ 0.26
VGLL3-202ENST00000398399 USP8P40818 1118 aa16.7■□□□□ 0.26
VGLL3-202ENST00000398399 KCNH8Q96L42 1107 aa16.7■□□□□ 0.26
VGLL3-202ENST00000398399 FOXD4L1Q9NU39 408 aa16.7■□□□□ 0.26
VGLL3-202ENST00000398399 ZKSCAN1P17029 563 aaPredicted RBP16.69■□□□□ 0.26
VGLL3-202ENST00000398399 CAVIN1Q6NZI2 390 aaKnown RBP16.69■□□□□ 0.26
VGLL3-202ENST00000398399 SASS6Q6UVJ0 657 aa16.69■□□□□ 0.26
VGLL3-202ENST00000398399 AKAP17AQ02040 695 aaKnown RBP16.68■□□□□ 0.26
VGLL3-202ENST00000398399 CUX2O14529 1486 aa16.68■□□□□ 0.26
VGLL3-202ENST00000398399 DDX19BQ9UMR2 479 aa16.67■□□□□ 0.26
VGLL3-202ENST00000398399 TSPYL1Q9H0U9 437 aa16.67■□□□□ 0.26
VGLL3-202ENST00000398399 SUPT6HQ7KZ85 1726 aaKnown RBP16.67■□□□□ 0.26
VGLL3-202ENST00000398399 RNF20Q5VTR2 975 aa16.67■□□□□ 0.26
VGLL3-202ENST00000398399 NOL8Q76FK4 1167 aaKnown RBP16.67■□□□□ 0.26
VGLL3-202ENST00000398399 PLEKHG5O94827 1062 aa16.67■□□□□ 0.26
VGLL3-202ENST00000398399 MBD3O95983 291 aa16.67■□□□□ 0.26
VGLL3-202ENST00000398399 CPLX2Q6PUV4 134 aaKnown RBP16.67■□□□□ 0.26
VGLL3-202ENST00000398399 CCDC47Q96A33 483 aaKnown RBP16.67■□□□□ 0.26
VGLL3-202ENST00000398399 INCENPQ9NQS7 918 aa16.66■□□□□ 0.26
VGLL3-202ENST00000398399 GOLGA6L7A0A1B0GV03 622 aa16.66■□□□□ 0.26
VGLL3-202ENST00000398399 CAGE1Q8TC20 777 aa16.66■□□□□ 0.26
VGLL3-202ENST00000398399 ZKSCAN2Q63HK3 967 aa16.65■□□□□ 0.26
VGLL3-202ENST00000398399 TRIM29Q14134 588 aa16.65■□□□□ 0.26
VGLL3-202ENST00000398399 MCTP1Q6DN14 999 aa16.65■□□□□ 0.26
VGLL3-202ENST00000398399 PODXL2Q9NZ53 605 aa16.64■□□□□ 0.25
VGLL3-202ENST00000398399 CARMIL1Q5VZK9 1371 aa16.64■□□□□ 0.25
VGLL3-202ENST00000398399 LMOD2Q6P5Q4 547 aa16.64■□□□□ 0.25
VGLL3-202ENST00000398399 TMX4Q9H1E5 349 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms