RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 CD109Q6YHK3 1445 aa5.87□□□□□ -1.47
FNDC3A-202ENST00000398316 ADGRL1O94910 1474 aa5.87□□□□□ -1.47
FNDC3A-202ENST00000398316 SYNMO15061 1565 aa5.87□□□□□ -1.47
FNDC3A-202ENST00000398316 NPATQ14207 1427 aa5.87□□□□□ -1.47
FNDC3A-202ENST00000398316 KIF1BO60333 1816 aa5.86□□□□□ -1.47
FNDC3A-202ENST00000398316 NWD1Q149M9 1564 aa5.86□□□□□ -1.47
FNDC3A-202ENST00000398316 CLTCQ00610 1675 aaKnown RBP5.86□□□□□ -1.47
FNDC3A-202ENST00000398316 IQGAP1P46940 1657 aa5.86□□□□□ -1.47
FNDC3A-202ENST00000398316 NOS1P29475 1434 aa5.85□□□□□ -1.47
FNDC3A-202ENST00000398316 SLIT1O75093 1534 aa5.85□□□□□ -1.47
FNDC3A-202ENST00000398316 COL17A1Q9UMD9 1497 aaPredicted RBP5.85□□□□□ -1.47
FNDC3A-202ENST00000398316 LMTK3Q96Q04 1460 aa5.85□□□□□ -1.47
FNDC3A-202ENST00000398316 CDK11AQ9UQ88 783 aaPredicted RBP5.85□□□□□ -1.47
FNDC3A-202ENST00000398316 MYOM2P54296 1465 aa5.85□□□□□ -1.47
FNDC3A-202ENST00000398316 ZFYVE9O95405 1425 aa5.85□□□□□ -1.47
FNDC3A-202ENST00000398316 CNTLNQ9NXG0 1405 aa5.85□□□□□ -1.47
FNDC3A-202ENST00000398316 NRXN3Q9Y4C0 1643 aa5.84□□□□□ -1.47
FNDC3A-202ENST00000398316 A2MP01023 1474 aa5.83□□□□□ -1.48
FNDC3A-202ENST00000398316 ARHGAP23Q9P227 1491 aa5.83□□□□□ -1.48
FNDC3A-202ENST00000398316 TRAPPC8Q9Y2L5 1435 aa5.83□□□□□ -1.48
FNDC3A-202ENST00000398316 DHX29Q7Z478 1369 aaKnown RBP5.83□□□□□ -1.48
FNDC3A-202ENST00000398316 TRPM1Q7Z4N2 1603 aa5.83□□□□□ -1.48
FNDC3A-202ENST00000398316 TSPOAP1O95153 1857 aa5.83□□□□□ -1.48
FNDC3A-202ENST00000398316 ADGRB2O60241 1585 aa5.83□□□□□ -1.48
FNDC3A-202ENST00000398316 UHRF1BP1Q6BDS2 1440 aa5.82□□□□□ -1.48
FNDC3A-202ENST00000398316 CLTCL1P53675 1640 aa5.82□□□□□ -1.48
FNDC3A-202ENST00000398316 MTUS2Q5JR59 1369 aa5.82□□□□□ -1.48
FNDC3A-202ENST00000398316 XRN1Q8IZH2 1706 aaKnown RBP5.81□□□□□ -1.48
FNDC3A-202ENST00000398316 MED14O60244 1454 aa5.8□□□□□ -1.48
FNDC3A-202ENST00000398316 LRRC7Q96NW7 1537 aa5.8□□□□□ -1.48
FNDC3A-202ENST00000398316 PLA2R1Q13018 1463 aa5.8□□□□□ -1.48
FNDC3A-202ENST00000398316 MYO5BQ9ULV0 1848 aa5.79□□□□□ -1.48
FNDC3A-202ENST00000398316 NEXMIFQ5QGS0 1516 aa5.79□□□□□ -1.48
FNDC3A-202ENST00000398316 DLC1Q96QB1 1528 aa5.79□□□□□ -1.48
FNDC3A-202ENST00000398316 KANK4Q5T7N3 995 aaPredicted RBP5.79□□□□□ -1.48
FNDC3A-202ENST00000398316 TOPAZ1Q8N9V7 1692 aa5.79□□□□□ -1.48
FNDC3A-202ENST00000398316 TRHP20396 242 aaPredicted RBP5.79□□□□□ -1.48
FNDC3A-202ENST00000398316 USP32Q8NFA0 1604 aa5.79□□□□□ -1.48
FNDC3A-202ENST00000398316 ALKQ9UM73 1620 aa5.79□□□□□ -1.48
FNDC3A-202ENST00000398316 NLRP1Q9C000 1473 aa5.78□□□□□ -1.48
FNDC3A-202ENST00000398316 SETD5Q9C0A6 1442 aa5.78□□□□□ -1.48
FNDC3A-202ENST00000398316 LOC105371045A0A1W2PR82 267 aa5.77□□□□□ -1.48
FNDC3A-202ENST00000398316 PLEKHD1A6NEE1 506 aa5.77□□□□□ -1.48
FNDC3A-202ENST00000398316 SPATA31E1Q6ZUB1 1445 aa5.77□□□□□ -1.49
FNDC3A-202ENST00000398316 ANKRD30AQ9BXX3 1397 aa5.77□□□□□ -1.49
FNDC3A-202ENST00000398316 CHD2O14647 1828 aaKnown RBP5.77□□□□□ -1.49
FNDC3A-202ENST00000398316 SCAPERQ9BY12 1400 aa5.77□□□□□ -1.49
FNDC3A-202ENST00000398316 CPS1P31327 1500 aa5.77□□□□□ -1.49
FNDC3A-202ENST00000398316 UBTFP17480 764 aaKnown RBP5.77□□□□□ -1.49
FNDC3A-202ENST00000398316 ERVK-7P63135 1459 aa5.77□□□□□ -1.49
FNDC3A-202ENST00000398316 IQSEC2Q5JU85 1478 aa5.76□□□□□ -1.49
FNDC3A-202ENST00000398316 TIMELESSQ9UNS1 1208 aa5.75□□□□□ -1.49
FNDC3A-202ENST00000398316 STRCQ7RTU9 1775 aa5.75□□□□□ -1.49
FNDC3A-202ENST00000398316 ARHGEF28Q8N1W1 1705 aaKnown RBP5.75□□□□□ -1.49
FNDC3A-202ENST00000398316 SETD1BQ9UPS6 1966 aaKnown RBP5.75□□□□□ -1.49
FNDC3A-202ENST00000398316 EFCAB2Q5VUJ9 269 aa5.75□□□□□ -1.49
FNDC3A-202ENST00000398316 ANKRD50Q9ULJ7 1429 aa5.75□□□□□ -1.49
FNDC3A-202ENST00000398316 ADGRB1O14514 1584 aa5.74□□□□□ -1.49
FNDC3A-202ENST00000398316 XIRP1Q702N8 1843 aaKnown RBP5.74□□□□□ -1.49
FNDC3A-202ENST00000398316 STAC3Q96MF2 364 aa5.74□□□□□ -1.49
FNDC3A-202ENST00000398316 CEP170BQ9Y4F5 1589 aaPredicted RBP5.74□□□□□ -1.49
FNDC3A-202ENST00000398316 ANKRD26Q9UPS8 1709 aa5.74□□□□□ -1.49
FNDC3A-202ENST00000398316 PHRF1Q9P1Y6 1649 aaKnown RBP5.73□□□□□ -1.49
FNDC3A-202ENST00000398316 GPRASP1Q5JY77 1395 aa5.73□□□□□ -1.49
FNDC3A-202ENST00000398316 TECPR2O15040 1411 aa5.73□□□□□ -1.49
FNDC3A-202ENST00000398316 ANKRD30BQ9BXX2 1392 aa5.72□□□□□ -1.49
FNDC3A-202ENST00000398316 MST1RQ04912 1400 aa5.72□□□□□ -1.49
FNDC3A-202ENST00000398316 A2ML1A8K2U0 1454 aa5.72□□□□□ -1.49
FNDC3A-202ENST00000398316 YEATS2Q9ULM3 1422 aa5.72□□□□□ -1.49
FNDC3A-202ENST00000398316 CRYBG1Q9Y4K1 1723 aa5.72□□□□□ -1.49
FNDC3A-202ENST00000398316 KIF15Q9NS87 1388 aa5.71□□□□□ -1.49
FNDC3A-202ENST00000398316 MYOM1P52179 1685 aa5.71□□□□□ -1.5
FNDC3A-202ENST00000398316 DHX57Q6P158 1386 aaKnown RBP5.71□□□□□ -1.5
FNDC3A-202ENST00000398316 NRKQ7Z2Y5 1582 aa5.71□□□□□ -1.5
FNDC3A-202ENST00000398316 AKAP12Q02952 1782 aa5.71□□□□□ -1.5
FNDC3A-202ENST00000398316 RALGAPBQ86X10 1494 aa5.7□□□□□ -1.5
FNDC3A-202ENST00000398316 ASXL1Q8IXJ9 1541 aa5.7□□□□□ -1.5
FNDC3A-202ENST00000398316 ITSN1Q15811 1721 aa5.7□□□□□ -1.5
FNDC3A-202ENST00000398316 NCOA3Q9Y6Q9 1424 aa5.69□□□□□ -1.5
FNDC3A-202ENST00000398316 TRIM26Q12899 539 aaPredicted RBP5.69□□□□□ -1.5
FNDC3A-202ENST00000398316 NALCNQ8IZF0 1738 aa5.69□□□□□ -1.5
FNDC3A-202ENST00000398316 MARF1Q9Y4F3 1742 aaKnown RBP5.69□□□□□ -1.5
FNDC3A-202ENST00000398316 MON2Q7Z3U7 1717 aa5.68□□□□□ -1.5
FNDC3A-202ENST00000398316 RAB3GAP2Q9H2M9 1393 aa5.67□□□□□ -1.5
FNDC3A-202ENST00000398316 FMN2Q9NZ56 1722 aa5.67□□□□□ -1.5
FNDC3A-202ENST00000398316 PIK3C2GO75747 1445 aa5.67□□□□□ -1.5
FNDC3A-202ENST00000398316 STRCP1A6NGW2 1772 aa5.67□□□□□ -1.5
FNDC3A-202ENST00000398316 SBNO2Q9Y2G9 1366 aa5.67□□□□□ -1.5
FNDC3A-202ENST00000398316 ABCC6O95255 1503 aa5.67□□□□□ -1.5
FNDC3A-202ENST00000398316 PIK3R4Q99570 1358 aa5.66□□□□□ -1.5
FNDC3A-202ENST00000398316 CDC42BPGQ6DT37 1551 aa5.66□□□□□ -1.5
FNDC3A-202ENST00000398316 FBLN2P98095 1184 aa5.66□□□□□ -1.5
FNDC3A-202ENST00000398316 CAMTA1Q9Y6Y1 1673 aa5.65□□□□□ -1.5
FNDC3A-202ENST00000398316 CFDP1Q9UEE9 299 aaPredicted RBP5.65□□□□□ -1.5
FNDC3A-202ENST00000398316 KIF1AQ12756 1690 aa5.65□□□□□ -1.5
FNDC3A-202ENST00000398316 NPM1P06748 294 aaKnown RBP eCLIP5.65□□□□□ -1.5
FNDC3A-202ENST00000398316 COL22A1Q8NFW1 1626 aaPredicted RBP5.65□□□□□ -1.51
FNDC3A-202ENST00000398316 PTPRMP28827 1452 aa5.65□□□□□ -1.51
FNDC3A-202ENST00000398316 MYT1Q01538 1121 aa5.65□□□□□ -1.51
FNDC3A-202ENST00000398316 NKTRP30414 1462 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms