RNA–Protein interactions for RNA: ENST00000398030.8

APEX1-202, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APEX1, Length 1,387 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-202ENST00000398030 ABCA6Q8N139 1617 aa17.02■□□□□ 0.31
APEX1-202ENST00000398030 YEATS2Q9ULM3 1422 aa17.02■□□□□ 0.31
APEX1-202ENST00000398030 SLC4A1APQ9BWU0 796 aaKnown RBP17.02■□□□□ 0.31
APEX1-202ENST00000398030 COL17A1Q9UMD9 1497 aaPredicted RBP17.01■□□□□ 0.31
APEX1-202ENST00000398030 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.01■□□□□ 0.311e-8■□□□□ 10
APEX1-202ENST00000398030 REREQ9P2R6 1566 aa17■□□□□ 0.31
APEX1-202ENST00000398030 ZEB1P37275 1124 aaPredicted RBP17■□□□□ 0.31
APEX1-202ENST00000398030 DHX57Q6P158 1386 aaKnown RBP16.99■□□□□ 0.31
APEX1-202ENST00000398030 ESF1Q9H501 851 aaKnown RBP16.99■□□□□ 0.31
APEX1-202ENST00000398030 ARID4BQ4LE39 1312 aaPredicted RBP16.98■□□□□ 0.31
APEX1-202ENST00000398030 KDM5DQ9BY66 1539 aa16.98■□□□□ 0.31
APEX1-202ENST00000398030 UNC13BO14795 1591 aa16.97■□□□□ 0.31
APEX1-202ENST00000398030 MPHOSPH9Q99550 1183 aa16.97■□□□□ 0.31
APEX1-202ENST00000398030 PPP6R1Q9UPN7 881 aa16.97■□□□□ 0.31
APEX1-202ENST00000398030 AGLP35573 1532 aa16.96■□□□□ 0.31
APEX1-202ENST00000398030 GGT6Q6P531 493 aa16.96■□□□□ 0.31
APEX1-202ENST00000398030 FAM135AQ9P2D6 1515 aa16.94■□□□□ 0.3
APEX1-202ENST00000398030 PRDM15P57071 1507 aaPredicted RBP16.93■□□□□ 0.3
APEX1-202ENST00000398030 WASHC2CQ9Y4E1 1318 aa16.93■□□□□ 0.3
APEX1-202ENST00000398030 BCORL1Q5H9F3 1711 aa16.92■□□□□ 0.3
APEX1-202ENST00000398030 RNF17Q9BXT8 1623 aaKnown RBP16.92■□□□□ 0.3
APEX1-202ENST00000398030 PKD2Q13563 968 aa16.9■□□□□ 0.3
APEX1-202ENST00000398030 DEPDC5O75140 1603 aa16.9■□□□□ 0.3
APEX1-202ENST00000398030 IQGAP3Q86VI3 1631 aa16.9■□□□□ 0.3
APEX1-202ENST00000398030 PZPP20742 1482 aa16.89■□□□□ 0.29
APEX1-202ENST00000398030 ZC3H13Q5T200 1668 aaKnown RBP16.86■□□□□ 0.29
APEX1-202ENST00000398030 LMTK2Q8IWU2 1503 aa16.86■□□□□ 0.29
APEX1-202ENST00000398030 MLECQ14165 292 aa16.86■□□□□ 0.29
APEX1-202ENST00000398030 CNTLNQ9NXG0 1405 aa16.85■□□□□ 0.29
APEX1-202ENST00000398030 RPRD2Q5VT52 1461 aaKnown RBP16.84■□□□□ 0.29
APEX1-202ENST00000398030 VWDEQ8N2E2 1590 aa16.84■□□□□ 0.29
APEX1-202ENST00000398030 TET3O43151 1660 aa16.83■□□□□ 0.28
APEX1-202ENST00000398030 TIMELESSQ9UNS1 1208 aa16.82■□□□□ 0.28
APEX1-202ENST00000398030 ABCC3O15438 1527 aa16.82■□□□□ 0.28
APEX1-202ENST00000398030 MROH1Q8NDA8 1641 aa16.81■□□□□ 0.28
APEX1-202ENST00000398030 CCDC144AA2RUR9 1427 aa16.81■□□□□ 0.28
APEX1-202ENST00000398030 TONSLQ96HA7 1378 aa16.8■□□□□ 0.28
APEX1-202ENST00000398030 EFCAB6Q5THR3 1501 aa16.8■□□□□ 0.28
APEX1-202ENST00000398030 ARHGAP31Q2M1Z3 1444 aa16.79■□□□□ 0.28
APEX1-202ENST00000398030 ANKRD30BQ9BXX2 1392 aa16.78■□□□□ 0.28
APEX1-202ENST00000398030 NEUROD1Q13562 356 aa16.78■□□□□ 0.28
APEX1-202ENST00000398030 FOXD1Q16676 465 aa16.77■□□□□ 0.28
APEX1-202ENST00000398030 CAMSAP1Q5T5Y3 1602 aa16.75■□□□□ 0.27
APEX1-202ENST00000398030 NPATQ14207 1427 aa16.73■□□□□ 0.27
APEX1-202ENST00000398030 CEP152O94986 1710 aa16.73■□□□□ 0.27
APEX1-202ENST00000398030 TRPM2O94759 1503 aa16.72■□□□□ 0.27
APEX1-202ENST00000398030 PTPRTO14522 1441 aa16.72■□□□□ 0.27
APEX1-202ENST00000398030 SIN3AQ96ST3 1273 aa16.71■□□□□ 0.27
APEX1-202ENST00000398030 ZMYM3Q14202 1370 aa16.71■□□□□ 0.27
APEX1-202ENST00000398030 SLC52A1Q9NWF4 448 aa16.7■□□□□ 0.26
APEX1-202ENST00000398030 E9PCH4 1651 aa16.7■□□□□ 0.26
APEX1-202ENST00000398030 CLTCQ00610 1675 aaKnown RBP16.69■□□□□ 0.26
APEX1-202ENST00000398030 STAG3Q9UJ98 1225 aa16.67■□□□□ 0.26
APEX1-202ENST00000398030 MROH2AA6NES4 1674 aa16.67■□□□□ 0.26
APEX1-202ENST00000398030 SPHKAPQ2M3C7 1700 aa16.67■□□□□ 0.26
APEX1-202ENST00000398030 ERVK-7P63135 1459 aa16.66■□□□□ 0.26
APEX1-202ENST00000398030 STAC3Q96MF2 364 aa16.66■□□□□ 0.26
APEX1-202ENST00000398030 NOS1P29475 1434 aa16.66■□□□□ 0.26
APEX1-202ENST00000398030 SIGLEC1Q9BZZ2 1709 aa16.65■□□□□ 0.26
APEX1-202ENST00000398030 FER1L4A9Z1Z3 1794 aa16.65■□□□□ 0.26
APEX1-202ENST00000398030 CHGAP10645 457 aaKnown RBP16.64■□□□□ 0.26
APEX1-202ENST00000398030 TNRQ92752 1358 aa16.64■□□□□ 0.25
APEX1-202ENST00000398030 PLA2R1Q13018 1463 aa16.63■□□□□ 0.25
APEX1-202ENST00000398030 SPATA31D1Q6ZQQ2 1576 aa16.62■□□□□ 0.25
APEX1-202ENST00000398030 ZNF326Q5BKZ1 582 aaKnown RBP16.62■□□□□ 0.25
APEX1-202ENST00000398030 PREX1Q8TCU6 1659 aa16.6■□□□□ 0.25
APEX1-202ENST00000398030 HDGFP51858 240 aaKnown RBP16.6■□□□□ 0.25
APEX1-202ENST00000398030 NEURL4Q96JN8 1562 aa16.6■□□□□ 0.25
APEX1-202ENST00000398030 RPGRIP1LQ68CZ1 1315 aa16.6■□□□□ 0.25
APEX1-202ENST00000398030 RGL3Q3MIN7 710 aa16.59■□□□□ 0.25
APEX1-202ENST00000398030 FBXO31Q5XUX0 539 aaPredicted RBP16.59■□□□□ 0.25
APEX1-202ENST00000398030 MADDQ8WXG6 1647 aa16.59■□□□□ 0.25
APEX1-202ENST00000398030 NLRP1Q9C000 1473 aa16.58■□□□□ 0.25
APEX1-202ENST00000398030 PLPPR3Q6T4P5 718 aa16.58■□□□□ 0.24
APEX1-202ENST00000398030 L3MBTL2Q969R5 705 aa16.58■□□□□ 0.24
APEX1-202ENST00000398030 CLTCL1P53675 1640 aa16.57■□□□□ 0.24
APEX1-202ENST00000398030 ADAMTSL3P82987 1691 aa16.57■□□□□ 0.24
APEX1-202ENST00000398030 DCAF11Q8TEB1 546 aa16.56■□□□□ 0.24
APEX1-202ENST00000398030 RIMS1Q86UR5 1692 aaKnown RBP16.56■□□□□ 0.24
APEX1-202ENST00000398030 SYNMO15061 1565 aa16.55■□□□□ 0.24
APEX1-202ENST00000398030 PPP1R15AO75807 674 aaPredicted RBP16.55■□□□□ 0.24
APEX1-202ENST00000398030 IDI1Q13907 227 aa16.55■□□□□ 0.24
APEX1-202ENST00000398030 SPATA31E1Q6ZUB1 1445 aa16.54■□□□□ 0.24
APEX1-202ENST00000398030 ADGRB3O60242 1522 aa16.54■□□□□ 0.24
APEX1-202ENST00000398030 CEBPAP49715 358 aaPredicted RBP16.53■□□□□ 0.24
APEX1-202ENST00000398030 PIK3C2BO00750 1634 aa16.53■□□□□ 0.24
APEX1-202ENST00000398030 UGGT1Q9NYU2 1555 aa16.53■□□□□ 0.24
APEX1-202ENST00000398030 KIF1BO60333 1816 aa16.53■□□□□ 0.24
APEX1-202ENST00000398030 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.52■□□□□ 0.24
APEX1-202ENST00000398030 KDM2AQ9Y2K7 1162 aa16.52■□□□□ 0.24
APEX1-202ENST00000398030 C3P01024 1663 aa16.52■□□□□ 0.23
APEX1-202ENST00000398030 VGFO15240 615 aaPredicted RBP16.51■□□□□ 0.23
APEX1-202ENST00000398030 PTPRMP28827 1452 aa16.51■□□□□ 0.23
APEX1-202ENST00000398030 THEMISQ8N1K5 641 aaPredicted RBP16.5■□□□□ 0.23
APEX1-202ENST00000398030 MYOM2P54296 1465 aa16.49■□□□□ 0.23
APEX1-202ENST00000398030 UHRF1BP1Q6BDS2 1440 aa16.49■□□□□ 0.23
APEX1-202ENST00000398030 EID1Q9Y6B2 187 aa16.48■□□□□ 0.23
APEX1-202ENST00000398030 A2ML1A8K2U0 1454 aa16.47■□□□□ 0.23
APEX1-202ENST00000398030 KDM5AP29375 1690 aaKnown RBP16.45■□□□□ 0.22
APEX1-202ENST00000398030 PRAG1Q86YV5 1406 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms