RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 MAGI2Q86UL8 1455 aa40.43■■■■■ 4.06
CPNE1-203ENST00000397442 NUP155O75694 1391 aa40.42■■■■■ 4.06
CPNE1-203ENST00000397442 DEPDC5O75140 1603 aa40.37■■■■■ 4.05
CPNE1-203ENST00000397442 SLC4A1APQ9BWU0 796 aaKnown RBP40.35■■■■■ 4.05
CPNE1-203ENST00000397442 FAM135AQ9P2D6 1515 aa40.32■■■■■ 4.05
CPNE1-203ENST00000397442 IQGAP3Q86VI3 1631 aa40.32■■■■■ 4.05
CPNE1-203ENST00000397442 BCORL1Q5H9F3 1711 aa40.31■■■■■ 4.04
CPNE1-203ENST00000397442 KIF3BO15066 747 aa40.3■■■■■ 4.04
CPNE1-203ENST00000397442 MROH1Q8NDA8 1641 aa40.28■■■■■ 4.04
CPNE1-203ENST00000397442 GRWD1Q9BQ67 446 aaKnown RBP eCLIP40.27■■■■■ 4.049e-9■□□□□ 10.7
CPNE1-203ENST00000397442 ATP10AO60312 1499 aa40.26■■■■■ 4.04
CPNE1-203ENST00000397442 RNF17Q9BXT8 1623 aaKnown RBP40.26■■■■■ 4.04
CPNE1-203ENST00000397442 PRDM15P57071 1507 aaPredicted RBP40.25■■■■■ 4.03
CPNE1-203ENST00000397442 FOXD1Q16676 465 aa40.24■■■■■ 4.03
CPNE1-203ENST00000397442 ARHGEF40Q8TER5 1519 aa40.23■■■■■ 4.03
CPNE1-203ENST00000397442 VWDEQ8N2E2 1590 aa40.23■■■■■ 4.03
CPNE1-203ENST00000397442 REREQ9P2R6 1566 aa40.23■■■■■ 4.03
CPNE1-203ENST00000397442 PKD2Q13563 968 aa40.21■■■■■ 4.03
CPNE1-203ENST00000397442 SIN3AQ96ST3 1273 aa40.19■■■■■ 4.02
CPNE1-203ENST00000397442 ANKRD30BQ9BXX2 1392 aa40.17■■■■■ 4.02
CPNE1-203ENST00000397442 SIGLEC1Q9BZZ2 1709 aa40.11■■■■■ 4.01
CPNE1-203ENST00000397442 KANK1Q14678 1352 aa40.11■■■■■ 4.01
CPNE1-203ENST00000397442 AGLP35573 1532 aa40.1■■■■■ 4.01
CPNE1-203ENST00000397442 TET3O43151 1660 aa40.07■■■■■ 4
CPNE1-203ENST00000397442 NEUROD1Q13562 356 aa40.06■■■■■ 4
CPNE1-203ENST00000397442 GGT6Q6P531 493 aa40.05■■■■■ 4
CPNE1-203ENST00000397442 LMTK2Q8IWU2 1503 aa40.04■■■■■ 4
CPNE1-203ENST00000397442 E9PCH4 1651 aa40.01■■■■■ 4
CPNE1-203ENST00000397442 CEP152O94986 1710 aa40.01■■■■■ 4
CPNE1-203ENST00000397442 ABCC3O15438 1527 aa39.96■■■■□ 3.99
CPNE1-203ENST00000397442 EFCAB6Q5THR3 1501 aa39.95■■■■□ 3.99
CPNE1-203ENST00000397442 PLA2R1Q13018 1463 aa39.95■■■■□ 3.99
CPNE1-203ENST00000397442 RPRD2Q5VT52 1461 aaKnown RBP39.94■■■■□ 3.98
CPNE1-203ENST00000397442 TIMELESSQ9UNS1 1208 aa39.91■■■■□ 3.98
CPNE1-203ENST00000397442 ZC3H13Q5T200 1668 aaKnown RBP39.9■■■■□ 3.98
CPNE1-203ENST00000397442 WASHC2CQ9Y4E1 1318 aa39.89■■■■□ 3.98
CPNE1-203ENST00000397442 CAMSAP1Q5T5Y3 1602 aa39.85■■■■□ 3.97
CPNE1-203ENST00000397442 PTPRTO14522 1441 aa39.84■■■■□ 3.97
CPNE1-203ENST00000397442 TONSLQ96HA7 1378 aa39.83■■■■□ 3.97
CPNE1-203ENST00000397442 SPHKAPQ2M3C7 1700 aa39.82■■■■□ 3.97
CPNE1-203ENST00000397442 PPP6R1Q9UPN7 881 aa39.8■■■■□ 3.96
CPNE1-203ENST00000397442 NPATQ14207 1427 aa39.8■■■■□ 3.96
CPNE1-203ENST00000397442 TRPM2O94759 1503 aa39.78■■■■□ 3.96
CPNE1-203ENST00000397442 CCDC144AA2RUR9 1427 aa39.76■■■■□ 3.96
CPNE1-203ENST00000397442 ARHGAP31Q2M1Z3 1444 aa39.75■■■■□ 3.95
CPNE1-203ENST00000397442 MLECQ14165 292 aa39.73■■■■□ 3.95
CPNE1-203ENST00000397442 ARID4BQ4LE39 1312 aaPredicted RBP39.71■■■■□ 3.95
CPNE1-203ENST00000397442 CLTCQ00610 1675 aaKnown RBP39.7■■■■□ 3.95
CPNE1-203ENST00000397442 PPP1R15AO75807 674 aaPredicted RBP39.68■■■■□ 3.94
CPNE1-203ENST00000397442 L3MBTL2Q969R5 705 aa39.67■■■■□ 3.94
CPNE1-203ENST00000397442 CLTCL1P53675 1640 aa39.66■■■■□ 3.94
CPNE1-203ENST00000397442 CFAP65Q6ZU64 1925 aaKnown RBP39.65■■■■□ 3.94
CPNE1-203ENST00000397442 NOS1P29475 1434 aa39.62■■■■□ 3.93
CPNE1-203ENST00000397442 CNTLNQ9NXG0 1405 aa39.6■■■■□ 3.93
CPNE1-203ENST00000397442 UGGT1Q9NYU2 1555 aa39.59■■■■□ 3.93
CPNE1-203ENST00000397442 PREX1Q8TCU6 1659 aa39.56■■■■□ 3.92
CPNE1-203ENST00000397442 SYNMO15061 1565 aa39.55■■■■□ 3.92
CPNE1-203ENST00000397442 SPATA31E1Q6ZUB1 1445 aa39.54■■■■□ 3.92
CPNE1-203ENST00000397442 PIK3C2BO00750 1634 aa39.49■■■■□ 3.91
CPNE1-203ENST00000397442 ESF1Q9H501 851 aaKnown RBP39.48■■■■□ 3.91
CPNE1-203ENST00000397442 ERVK-7P63135 1459 aa39.48■■■■□ 3.91
CPNE1-203ENST00000397442 ZMYM3Q14202 1370 aa39.48■■■■□ 3.91
CPNE1-203ENST00000397442 MROH2AA6NES4 1674 aa39.48■■■■□ 3.91
CPNE1-203ENST00000397442 FBXO31Q5XUX0 539 aaPredicted RBP39.47■■■■□ 3.91
CPNE1-203ENST00000397442 NEURL4Q96JN8 1562 aa39.47■■■■□ 3.91
CPNE1-203ENST00000397442 KIF1BO60333 1816 aa39.44■■■■□ 3.9
CPNE1-203ENST00000397442 SPATA31D1Q6ZQQ2 1576 aa39.43■■■■□ 3.9
CPNE1-203ENST00000397442 RGL3Q3MIN7 710 aa39.43■■■■□ 3.9
CPNE1-203ENST00000397442 FER1L4A9Z1Z3 1794 aa39.43■■■■□ 3.9
CPNE1-203ENST00000397442 NBPF8Q3BBV2 869 aa39.38■■■■□ 3.9
CPNE1-203ENST00000397442 DCAF11Q8TEB1 546 aa39.38■■■■□ 3.89
CPNE1-203ENST00000397442 ADGRB3O60242 1522 aa39.37■■■■□ 3.89
CPNE1-203ENST00000397442 UHRF1BP1Q6BDS2 1440 aa39.35■■■■□ 3.89
CPNE1-203ENST00000397442 SLC52A1Q9NWF4 448 aa39.35■■■■□ 3.89
CPNE1-203ENST00000397442 IDI1Q13907 227 aa39.33■■■■□ 3.89
CPNE1-203ENST00000397442 ADAMTSL3P82987 1691 aa39.31■■■■□ 3.88
CPNE1-203ENST00000397442 KDM2AQ9Y2K7 1162 aa39.3■■■■□ 3.88
CPNE1-203ENST00000397442 MADDQ8WXG6 1647 aa39.3■■■■□ 3.88
CPNE1-203ENST00000397442 C3P01024 1663 aa39.3■■■■□ 3.88
CPNE1-203ENST00000397442 IFT172Q9UG01 1749 aa39.24■■■■□ 3.87
CPNE1-203ENST00000397442 PRAG1Q86YV5 1406 aa39.24■■■■□ 3.87
CPNE1-203ENST00000397442 TMEM131LA2VDJ0 1609 aa39.23■■■■□ 3.87
CPNE1-203ENST00000397442 CHGAP10645 457 aaKnown RBP39.22■■■■□ 3.87
CPNE1-203ENST00000397442 ZNF326Q5BKZ1 582 aaKnown RBP39.22■■■■□ 3.87
CPNE1-203ENST00000397442 CEBPAP49715 358 aaPredicted RBP39.21■■■■□ 3.87
CPNE1-203ENST00000397442 RIMS1Q86UR5 1692 aaKnown RBP39.21■■■■□ 3.87
CPNE1-203ENST00000397442 TNRQ92752 1358 aa39.19■■■■□ 3.86
CPNE1-203ENST00000397442 MYO5BQ9ULV0 1848 aa39.19■■■■□ 3.86
CPNE1-203ENST00000397442 STAC3Q96MF2 364 aa39.18■■■■□ 3.86
CPNE1-203ENST00000397442 PPLO60437 1756 aa39.16■■■■□ 3.86
CPNE1-203ENST00000397442 RALGAPBQ86X10 1494 aa39.16■■■■□ 3.86
CPNE1-203ENST00000397442 MYOM2P54296 1465 aa39.15■■■■□ 3.86
CPNE1-203ENST00000397442 TRPM1Q7Z4N2 1603 aa39.13■■■■□ 3.85
CPNE1-203ENST00000397442 RPGRIP1LQ68CZ1 1315 aa39.12■■■■□ 3.85
CPNE1-203ENST00000397442 ZNF316A6NFI3 1004 aaPredicted RBP39.12■■■■□ 3.85
CPNE1-203ENST00000397442 NEXMIFQ5QGS0 1516 aa39.1■■■■□ 3.85
CPNE1-203ENST00000397442 A2ML1A8K2U0 1454 aa39.08■■■■□ 3.85
CPNE1-203ENST00000397442 NRXN1Q9ULB1 1477 aa39.07■■■■□ 3.85
CPNE1-203ENST00000397442 ADGRF5Q8IZF2 1346 aa39.04■■■■□ 3.84
CPNE1-203ENST00000397442 NLRP1Q9C000 1473 aa39.04■■■■□ 3.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms