RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 ZNF644Q9H582 1327 aaPredicted RBP13.39□□□□□ -0.27
APTX-207ENST00000397172 TCOF1Q13428 1488 aaKnown RBP13.39□□□□□ -0.27
APTX-207ENST00000397172 ARHGEF12Q9NZN5 1544 aa13.39□□□□□ -0.27
APTX-207ENST00000397172 PPM1GO15355 546 aaPredicted RBP13.38□□□□□ -0.27
APTX-207ENST00000397172 RICTORQ6R327 1708 aa13.37□□□□□ -0.27
APTX-207ENST00000397172 SYCP2Q9BX26 1530 aa13.37□□□□□ -0.27
APTX-207ENST00000397172 MBD5Q9P267 1494 aa13.37□□□□□ -0.27
APTX-207ENST00000397172 WASHC2AQ641Q2 1341 aa13.37□□□□□ -0.27
APTX-207ENST00000397172 PTPN23Q9H3S7 1636 aa13.37□□□□□ -0.27
APTX-207ENST00000397172 FRMPD1Q5SYB0 1578 aa13.37□□□□□ -0.27
APTX-207ENST00000397172 MAGI2Q86UL8 1455 aa13.37□□□□□ -0.27
APTX-207ENST00000397172 HNRNPMP52272 730 aaKnown RBP eCLIP13.36□□□□□ -0.27
APTX-207ENST00000397172 RSPH6AQ9H0K4 717 aa13.36□□□□□ -0.27
APTX-207ENST00000397172 KDM5CP41229 1560 aa13.36□□□□□ -0.27
APTX-207ENST00000397172 ZMYM4Q5VZL5 1548 aa13.36□□□□□ -0.27
APTX-207ENST00000397172 TRAPPC8Q9Y2L5 1435 aa13.36□□□□□ -0.27
APTX-207ENST00000397172 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.35□□□□□ -0.27
APTX-207ENST00000397172 ARHGEF5Q12774 1597 aa13.35□□□□□ -0.27
APTX-207ENST00000397172 AFAP1Q8N556 730 aa13.35□□□□□ -0.27
APTX-207ENST00000397172 CCDC141Q6ZP82 1450 aa13.33□□□□□ -0.27
APTX-207ENST00000397172 MLH3Q9UHC1 1453 aa13.33□□□□□ -0.27
APTX-207ENST00000397172 IL27Q8NEV9 243 aa13.33□□□□□ -0.28
APTX-207ENST00000397172 SETD5Q9C0A6 1442 aa13.33□□□□□ -0.28
APTX-207ENST00000397172 RAB3GAP2Q9H2M9 1393 aa13.32□□□□□ -0.28
APTX-207ENST00000397172 WASHC2CQ9Y4E1 1318 aa13.32□□□□□ -0.28
APTX-207ENST00000397172 RTEL1-TNFRSF6BF6WH68 1400 aa13.32□□□□□ -0.28
APTX-207ENST00000397172 EIF5BO60841 1220 aaKnown RBP13.31□□□□□ -0.28
APTX-207ENST00000397172 PAK3O75914 559 aaPredicted RBP13.31□□□□□ -0.28
APTX-207ENST00000397172 TSPY4P0CV99 314 aa13.31□□□□□ -0.28
APTX-207ENST00000397172 TSPY10P0CW01 314 aa13.31□□□□□ -0.28
APTX-207ENST00000397172 NCBP3Q53F19 620 aaKnown RBP13.31□□□□□ -0.28
APTX-207ENST00000397172 SPAG9O60271 1321 aaKnown RBP13.31□□□□□ -0.28
APTX-207ENST00000397172 HECW2Q9P2P5 1572 aa13.3□□□□□ -0.28
APTX-207ENST00000397172 FAM50AQ14320 339 aaKnown RBP13.3□□□□□ -0.28
APTX-207ENST00000397172 ZFYVE16Q7Z3T8 1539 aa13.29□□□□□ -0.28
APTX-207ENST00000397172 SHANK2Q9UPX8 1470 aa13.29□□□□□ -0.28
APTX-207ENST00000397172 DNMT1P26358 1616 aaKnown RBP13.29□□□□□ -0.28
APTX-207ENST00000397172 ABCC5O15440 1437 aa13.29□□□□□ -0.28
APTX-207ENST00000397172 DAPK1P53355 1430 aa13.29□□□□□ -0.28
APTX-207ENST00000397172 IRX6P78412 446 aaPredicted RBP13.28□□□□□ -0.28
APTX-207ENST00000397172 PKNOX2Q96KN3 472 aa13.28□□□□□ -0.28
APTX-207ENST00000397172 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.28□□□□□ -0.28
APTX-207ENST00000397172 ARHGEF40Q8TER5 1519 aa13.28□□□□□ -0.28
APTX-207ENST00000397172 MAST1Q9Y2H9 1570 aa13.28□□□□□ -0.28
APTX-207ENST00000397172 INO80Q9ULG1 1556 aaPredicted RBP13.27□□□□□ -0.28
APTX-207ENST00000397172 ATP7AQ04656 1500 aa13.27□□□□□ -0.29
APTX-207ENST00000397172 KIDINS220Q9ULH0 1771 aa13.26□□□□□ -0.29
APTX-207ENST00000397172 NEFMP07197 916 aa13.26□□□□□ -0.29
APTX-207ENST00000397172 B4GALNT3Q6L9W6 998 aa13.26□□□□□ -0.29
APTX-207ENST00000397172 C9orf84Q5VXU9 1444 aa13.26□□□□□ -0.29
APTX-207ENST00000397172 YEATS2Q9ULM3 1422 aa13.26□□□□□ -0.29
APTX-207ENST00000397172 ZBED9Q6R2W3 1325 aa13.26□□□□□ -0.29
APTX-207ENST00000397172 ATP10AO60312 1499 aa13.26□□□□□ -0.29
APTX-207ENST00000397172 RTN4Q9NQC3 1192 aaKnown RBP13.25□□□□□ -0.29
APTX-207ENST00000397172 DDRGK1Q96HY6 314 aa13.25□□□□□ -0.29
APTX-207ENST00000397172 CROCC2H7BZ55 1655 aa13.24□□□□□ -0.29
APTX-207ENST00000397172 REREQ9P2R6 1566 aa13.24□□□□□ -0.29
APTX-207ENST00000397172 RNF216Q9NWF9 866 aaPredicted RBP13.24□□□□□ -0.29
APTX-207ENST00000397172 DIP2CQ9Y2E4 1556 aa13.24□□□□□ -0.29
APTX-207ENST00000397172 ABCA6Q8N139 1617 aa13.23□□□□□ -0.29
APTX-207ENST00000397172 TONSLQ96HA7 1378 aa13.22□□□□□ -0.29
APTX-207ENST00000397172 ADGRL2O95490 1459 aa13.22□□□□□ -0.29
APTX-207ENST00000397172 PLXNC1O60486 1568 aa13.22□□□□□ -0.29
APTX-207ENST00000397172 ANKRD30AQ9BXX3 1397 aa13.21□□□□□ -0.29
APTX-207ENST00000397172 ROCK1Q13464 1354 aa13.21□□□□□ -0.3
APTX-207ENST00000397172 ADGBQ8N7X0 1667 aa13.2□□□□□ -0.3
APTX-207ENST00000397172 GSE1Q14687 1217 aa13.2□□□□□ -0.3
APTX-207ENST00000397172 DHX29Q7Z478 1369 aaKnown RBP13.2□□□□□ -0.3
APTX-207ENST00000397172 PTPRKQ15262 1439 aa13.2□□□□□ -0.3
APTX-207ENST00000397172 NCOA1Q15788 1441 aa13.2□□□□□ -0.3
APTX-207ENST00000397172 A2MP01023 1474 aa13.2□□□□□ -0.3
APTX-207ENST00000397172 AGLP35573 1532 aa13.19□□□□□ -0.3
APTX-207ENST00000397172 FAM43AQ8N2R8 423 aa13.19□□□□□ -0.3
APTX-207ENST00000397172 TCERG1O14776 1098 aaKnown RBP13.19□□□□□ -0.3
APTX-207ENST00000397172 CHIC2Q9UKJ5 165 aa13.18□□□□□ -0.3
APTX-207ENST00000397172 DUOX2Q9NRD8 1548 aa13.17□□□□□ -0.3
APTX-207ENST00000397172 KIF15Q9NS87 1388 aa13.17□□□□□ -0.3
APTX-207ENST00000397172 SMG6Q86US8 1419 aaKnown RBP13.16□□□□□ -0.3
APTX-207ENST00000397172 ARID4BQ4LE39 1312 aaPredicted RBP13.16□□□□□ -0.3
APTX-207ENST00000397172 MS4A1P11836 297 aa13.16□□□□□ -0.3
APTX-207ENST00000397172 RRP7BPQ9NSQ0 103 aa13.16□□□□□ -0.3
APTX-207ENST00000397172 ERBINQ96RT1 1412 aa13.15□□□□□ -0.3
APTX-207ENST00000397172 C1QBPQ07021 282 aaKnown RBP13.15□□□□□ -0.3
APTX-207ENST00000397172 SIN3AQ96ST3 1273 aa13.13□□□□□ -0.31
APTX-207ENST00000397172 BCORL1Q5H9F3 1711 aa13.13□□□□□ -0.31
APTX-207ENST00000397172 SIGLEC1Q9BZZ2 1709 aa13.13□□□□□ -0.31
APTX-207ENST00000397172 EIF2AK4Q9P2K8 1649 aaKnown RBP13.13□□□□□ -0.31
APTX-207ENST00000397172 KCNA4P22459 653 aa13.13□□□□□ -0.31
APTX-207ENST00000397172 DAXXQ9UER7 740 aaPredicted RBP13.12□□□□□ -0.31
APTX-207ENST00000397172 ANKRD50Q9ULJ7 1429 aa13.11□□□□□ -0.31
APTX-207ENST00000397172 HFM1A2PYH4 1435 aa13.11□□□□□ -0.31
APTX-207ENST00000397172 CNTLNQ9NXG0 1405 aa13.11□□□□□ -0.31
APTX-207ENST00000397172 KIF3BO15066 747 aa13.1□□□□□ -0.31
APTX-207ENST00000397172 RNF123Q5XPI4 1314 aa13.1□□□□□ -0.31
APTX-207ENST00000397172 NPM3O75607 178 aaKnown RBP13.1□□□□□ -0.31
APTX-207ENST00000397172 NUDCQ9Y266 331 aa13.09□□□□□ -0.31
APTX-207ENST00000397172 NAIPQ13075 1403 aa13.09□□□□□ -0.31
APTX-207ENST00000397172 FAM135AQ9P2D6 1515 aa13.08□□□□□ -0.32
APTX-207ENST00000397172 ADAMTSL3P82987 1691 aa13.08□□□□□ -0.32
APTX-207ENST00000397172 RNF17Q9BXT8 1623 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms