RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 KIAA0556O60303 1618 aa12.14□□□□□ -0.47
CAPN3-206ENST00000397163 BACH2Q9BYV9 841 aa12.14□□□□□ -0.47
CAPN3-206ENST00000397163 MS4A1P11836 297 aa12.13□□□□□ -0.47
CAPN3-206ENST00000397163 DISP1Q96F81 1524 aa12.12□□□□□ -0.47
CAPN3-206ENST00000397163 KDM5CP41229 1560 aa12.12□□□□□ -0.47
CAPN3-206ENST00000397163 SLC4A3P48751 1232 aa12.12□□□□□ -0.47
CAPN3-206ENST00000397163 SKAP1Q86WV1 359 aa12.12□□□□□ -0.47
CAPN3-206ENST00000397163 USP35Q9P2H5 1018 aa12.12□□□□□ -0.47
CAPN3-206ENST00000397163 CARMIL2Q6F5E8 1435 aa12.12□□□□□ -0.47
CAPN3-206ENST00000397163 PPM1GO15355 546 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-206ENST00000397163 PDE3BQ13370 1112 aa12.11□□□□□ -0.47
CAPN3-206ENST00000397163 KIF14Q15058 1648 aa12.11□□□□□ -0.47
CAPN3-206ENST00000397163 WASHC2CQ9Y4E1 1318 aa12.11□□□□□ -0.47
CAPN3-206ENST00000397163 NLRP13Q86W25 1043 aa12.11□□□□□ -0.47
CAPN3-206ENST00000397163 KTN1Q86UP2 1357 aaKnown RBP12.11□□□□□ -0.47
CAPN3-206ENST00000397163 ANKRD30AQ9BXX3 1397 aa12.11□□□□□ -0.47
CAPN3-206ENST00000397163 PRG4Q92954 1404 aaPredicted RBP12.1□□□□□ -0.47
CAPN3-206ENST00000397163 RALGAPBQ86X10 1494 aa12.1□□□□□ -0.47
CAPN3-206ENST00000397163 NUP155O75694 1391 aa12.1□□□□□ -0.47
CAPN3-206ENST00000397163 CAMSAP2Q08AD1 1489 aa12.1□□□□□ -0.47
CAPN3-206ENST00000397163 DCAF11Q8TEB1 546 aa12.1□□□□□ -0.47
CAPN3-206ENST00000397163 FRAT1Q92837 279 aaPredicted RBP12.1□□□□□ -0.47
CAPN3-206ENST00000397163 NUP153P49790 1475 aaKnown RBP12.09□□□□□ -0.47
CAPN3-206ENST00000397163 UHRF1BP1Q6BDS2 1440 aa12.09□□□□□ -0.47
CAPN3-206ENST00000397163 GSE1Q14687 1217 aa12.09□□□□□ -0.47
CAPN3-206ENST00000397163 CDCA7LQ96GN5 454 aa12.09□□□□□ -0.47
CAPN3-206ENST00000397163 PLIN1O60240 522 aa12.09□□□□□ -0.47
CAPN3-206ENST00000397163 ANKRD50Q9ULJ7 1429 aa12.08□□□□□ -0.48
CAPN3-206ENST00000397163 DDRGK1Q96HY6 314 aa12.07□□□□□ -0.48
CAPN3-206ENST00000397163 TROQ12816 1431 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-206ENST00000397163 CRBNQ96SW2 442 aa12.06□□□□□ -0.48
CAPN3-206ENST00000397163 DNAJC5Q9H3Z4 198 aa12.05□□□□□ -0.48
CAPN3-206ENST00000397163 GPATCH8Q9UKJ3 1502 aaKnown RBP12.05□□□□□ -0.48
CAPN3-206ENST00000397163 CC2D1BQ5T0F9 858 aaKnown RBP12.05□□□□□ -0.48
CAPN3-206ENST00000397163 ADGRL2O95490 1459 aa12.04□□□□□ -0.48
CAPN3-206ENST00000397163 NFKBIBQ15653 356 aa12.04□□□□□ -0.48
CAPN3-206ENST00000397163 DAXXQ9UER7 740 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-206ENST00000397163 PARD3Q8TEW0 1356 aa12.03□□□□□ -0.48
CAPN3-206ENST00000397163 RAPGEF6Q8TEU7 1601 aa12.03□□□□□ -0.48
CAPN3-206ENST00000397163 TSPY4P0CV99 314 aa12.02□□□□□ -0.48
CAPN3-206ENST00000397163 TSPY10P0CW01 314 aa12.02□□□□□ -0.48
CAPN3-206ENST00000397163 ARHGEF12Q9NZN5 1544 aa12.02□□□□□ -0.48
CAPN3-206ENST00000397163 PTPRGP23470 1445 aa12.02□□□□□ -0.49
CAPN3-206ENST00000397163 ADGBQ8N7X0 1667 aa12.01□□□□□ -0.49
CAPN3-206ENST00000397163 VSIG10Q8N0Z9 540 aa12.01□□□□□ -0.49
CAPN3-206ENST00000397163 ABCA8O94911 1581 aa12.01□□□□□ -0.49
CAPN3-206ENST00000397163 ARXQ96QS3 562 aa12.01□□□□□ -0.49
CAPN3-206ENST00000397163 SLC24A1O60721 1099 aa12□□□□□ -0.49
CAPN3-206ENST00000397163 RGL3Q3MIN7 710 aa12□□□□□ -0.49
CAPN3-206ENST00000397163 PER1O15534 1290 aaPredicted RBP12□□□□□ -0.49
CAPN3-206ENST00000397163 ERCC6L2Q5T890 1561 aa12□□□□□ -0.49
CAPN3-206ENST00000397163 C9orf84Q5VXU9 1444 aa11.99□□□□□ -0.49
CAPN3-206ENST00000397163 NBPF1Q3BBV0 1214 aa11.99□□□□□ -0.49
CAPN3-206ENST00000397163 C20orf194Q5TEA3 1177 aa11.99□□□□□ -0.49
CAPN3-206ENST00000397163 ITSN2Q9NZM3 1697 aa11.99□□□□□ -0.49
CAPN3-206ENST00000397163 UHRF1BP1LA0JNW5 1464 aa11.98□□□□□ -0.49
CAPN3-206ENST00000397163 PLB1Q6P1J6 1458 aa11.98□□□□□ -0.49
CAPN3-206ENST00000397163 RIMBP3CA6NJZ7 1639 aa11.98□□□□□ -0.49
CAPN3-206ENST00000397163 RIMBP3BA6NNM3 1639 aa11.98□□□□□ -0.49
CAPN3-206ENST00000397163 RIMBP3Q9UFD9 1639 aa11.98□□□□□ -0.49
CAPN3-206ENST00000397163 RSPH6AQ9H0K4 717 aa11.98□□□□□ -0.49
CAPN3-206ENST00000397163 PLEKHD1A6NEE1 506 aa11.98□□□□□ -0.49
CAPN3-206ENST00000397163 PANK3Q9H999 370 aa11.98□□□□□ -0.49
CAPN3-206ENST00000397163 CYB5RLQ6IPT4 315 aa11.97□□□□□ -0.49
CAPN3-206ENST00000397163 FRAT2O75474 233 aaPredicted RBP11.96□□□□□ -0.49
CAPN3-206ENST00000397163 ZMYND15Q9H091 742 aa11.96□□□□□ -0.49
CAPN3-206ENST00000397163 HNRNPMP52272 730 aaKnown RBP eCLIP11.96□□□□□ -0.5
CAPN3-206ENST00000397163 CENPQQ7L2Z9 268 aaPredicted RBP11.96□□□□□ -0.5
CAPN3-206ENST00000397163 BLMP54132 1417 aaPredicted RBP11.95□□□□□ -0.5
CAPN3-206ENST00000397163 E9PCH4 1651 aa11.95□□□□□ -0.5
CAPN3-206ENST00000397163 CROCC2H7BZ55 1655 aa11.94□□□□□ -0.5
CAPN3-206ENST00000397163 FAM161AQ3B820 660 aa11.94□□□□□ -0.5
CAPN3-206ENST00000397163 PRAG1Q86YV5 1406 aa11.94□□□□□ -0.5
CAPN3-206ENST00000397163 ADAMTS8Q9UP79 889 aa11.94□□□□□ -0.5
CAPN3-206ENST00000397163 CCDC144AA2RUR9 1427 aa11.94□□□□□ -0.5
CAPN3-206ENST00000397163 KDM2BQ8NHM5 1336 aa11.94□□□□□ -0.5
CAPN3-206ENST00000397163 DISP3Q9P2K9 1392 aa11.93□□□□□ -0.5
CAPN3-206ENST00000397163 RGS3P49796 1198 aa11.93□□□□□ -0.5
CAPN3-206ENST00000397163 TMF1P82094 1093 aa11.93□□□□□ -0.5
CAPN3-206ENST00000397163 WDR43Q15061 677 aaKnown RBP eCLIP11.93□□□□□ -0.5
CAPN3-206ENST00000397163 INSRP06213 1382 aa11.93□□□□□ -0.5
CAPN3-206ENST00000397163 PLEKHG5O94827 1062 aa11.92□□□□□ -0.5
CAPN3-206ENST00000397163 SHANK2Q9UPX8 1470 aa11.92□□□□□ -0.5
CAPN3-206ENST00000397163 FAM43AQ8N2R8 423 aa11.92□□□□□ -0.5
CAPN3-206ENST00000397163 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-206ENST00000397163 TESK2Q96S53 571 aa11.92□□□□□ -0.5
CAPN3-206ENST00000397163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.92□□□□□ -0.5
CAPN3-206ENST00000397163 ABCC2Q92887 1545 aa11.92□□□□□ -0.5
CAPN3-206ENST00000397163 PLEKHH2Q8IVE3 1493 aa11.92□□□□□ -0.5
CAPN3-206ENST00000397163 KDM5DQ9BY66 1539 aa11.91□□□□□ -0.5
CAPN3-206ENST00000397163 NPM1P06748 294 aaKnown RBP eCLIP11.91□□□□□ -0.5
CAPN3-206ENST00000397163 RRAGDQ9NQL2 400 aaPredicted RBP11.91□□□□□ -0.5
CAPN3-206ENST00000397163 COL17A1Q9UMD9 1497 aaPredicted RBP11.91□□□□□ -0.5
CAPN3-206ENST00000397163 C8orf34Q49A92 452 aa11.9□□□□□ -0.5
CAPN3-206ENST00000397163 DUSP27Q5VZP5 1158 aa11.9□□□□□ -0.5
CAPN3-206ENST00000397163 ERBINQ96RT1 1412 aa11.9□□□□□ -0.5
CAPN3-206ENST00000397163 ZMYM4Q5VZL5 1548 aa11.9□□□□□ -0.5
CAPN3-206ENST00000397163 GOLGA2Q08379 1002 aa11.9□□□□□ -0.51
CAPN3-206ENST00000397163 ADCY10Q96PN6 1610 aa11.89□□□□□ -0.51
CAPN3-206ENST00000397163 NAP1L5Q96NT1 182 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms