RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 LRRC9Q6ZRR7 1453 aa20.31■□□□□ 0.84
SEC13-209ENST00000397117 DHX29Q7Z478 1369 aaKnown RBP20.31■□□□□ 0.84
SEC13-209ENST00000397117 UBAP1LF5GYI3 381 aa20.31■□□□□ 0.84
SEC13-209ENST00000397117 A2ML1A8K2U0 1454 aa20.3■□□□□ 0.84
SEC13-209ENST00000397117 DNMT1P26358 1616 aaKnown RBP20.3■□□□□ 0.84
SEC13-209ENST00000397117 EHBP1L1Q8N3D4 1523 aa20.29■□□□□ 0.84
SEC13-209ENST00000397117 TRIM26Q12899 539 aaPredicted RBP20.27■□□□□ 0.83
SEC13-209ENST00000397117 FBXO31Q5XUX0 539 aaPredicted RBP20.25■□□□□ 0.83
SEC13-209ENST00000397117 KIF3BO15066 747 aa20.24■□□□□ 0.83
SEC13-209ENST00000397117 TNRQ92752 1358 aa20.23■□□□□ 0.83
SEC13-209ENST00000397117 POLR1AO95602 1720 aaPredicted RBP20.22■□□□□ 0.83
SEC13-209ENST00000397117 RSPH4AQ5TD94 716 aa20.21■□□□□ 0.83
SEC13-209ENST00000397117 PZPP20742 1482 aa20.21■□□□□ 0.83
SEC13-209ENST00000397117 CCDC141Q6ZP82 1450 aa20.21■□□□□ 0.83
SEC13-209ENST00000397117 FAM135AQ9P2D6 1515 aa20.21■□□□□ 0.83
SEC13-209ENST00000397117 NEURL4Q96JN8 1562 aa20.21■□□□□ 0.83
SEC13-209ENST00000397117 KDM5DQ9BY66 1539 aa20.19■□□□□ 0.82
SEC13-209ENST00000397117 CAMSAP2Q08AD1 1489 aa20.19■□□□□ 0.82
SEC13-209ENST00000397117 NCOA2Q15596 1464 aa20.18■□□□□ 0.82
SEC13-209ENST00000397117 WASHC2CQ9Y4E1 1318 aa20.17■□□□□ 0.82
SEC13-209ENST00000397117 CPS1P31327 1500 aa20.17■□□□□ 0.82
SEC13-209ENST00000397117 SHANK2Q9UPX8 1470 aa20.16■□□□□ 0.82
SEC13-209ENST00000397117 PCGF6Q9BYE7 350 aa20.16■□□□□ 0.82
SEC13-209ENST00000397117 MIA2Q96PC5 1412 aa20.16■□□□□ 0.82
SEC13-209ENST00000397117 ANKLE2Q86XL3 938 aa20.15■□□□□ 0.82
SEC13-209ENST00000397117 ARHGEF5Q12774 1597 aa20.15■□□□□ 0.82
SEC13-209ENST00000397117 THEMISQ8N1K5 641 aaPredicted RBP20.14■□□□□ 0.81
SEC13-209ENST00000397117 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.14■□□□□ 0.811e-6■■■■□ 25.4
SEC13-209ENST00000397117 TOM1O60784 492 aa20.13■□□□□ 0.81
SEC13-209ENST00000397117 HSPA1LP34931 641 aa20.13■□□□□ 0.81
SEC13-209ENST00000397117 NLRP1Q9C000 1473 aa20.12■□□□□ 0.81
SEC13-209ENST00000397117 VWDEQ8N2E2 1590 aa20.12■□□□□ 0.81
SEC13-209ENST00000397117 MED14O60244 1454 aa20.11■□□□□ 0.81
SEC13-209ENST00000397117 DEPDC5O75140 1603 aa20.11■□□□□ 0.81
SEC13-209ENST00000397117 UGGT1Q9NYU2 1555 aa20.1■□□□□ 0.81
SEC13-209ENST00000397117 TSPY4P0CV99 314 aa20.1■□□□□ 0.81
SEC13-209ENST00000397117 TSPY10P0CW01 314 aa20.1■□□□□ 0.81
SEC13-209ENST00000397117 PIP4K2BP78356 416 aa20.1■□□□□ 0.81
SEC13-209ENST00000397117 NPHP4O75161 1426 aaPredicted RBP20.08■□□□□ 0.81
SEC13-209ENST00000397117 SCAF1Q9H7N4 1312 aaKnown RBP20.08■□□□□ 0.81
SEC13-209ENST00000397117 RNF17Q9BXT8 1623 aaKnown RBP20.08■□□□□ 0.81
SEC13-209ENST00000397117 MAST1Q9Y2H9 1570 aa20.06■□□□□ 0.8
SEC13-209ENST00000397117 ALKQ9UM73 1620 aa20.06■□□□□ 0.8
SEC13-209ENST00000397117 MED1Q15648 1581 aaPredicted RBP20.05■□□□□ 0.8
SEC13-209ENST00000397117 ABCC3O15438 1527 aa20.05■□□□□ 0.8
SEC13-209ENST00000397117 RRBP1Q9P2E9 1410 aaKnown RBP20.04■□□□□ 0.8
SEC13-209ENST00000397117 IQGAP1P46940 1657 aa20.04■□□□□ 0.8
SEC13-209ENST00000397117 ZC3H13Q5T200 1668 aaKnown RBP20.04■□□□□ 0.8
SEC13-209ENST00000397117 STRCP1A6NGW2 1772 aa20.04■□□□□ 0.8
SEC13-209ENST00000397117 MYOM3Q5VTT5 1437 aa20.03■□□□□ 0.8
SEC13-209ENST00000397117 CFAP65Q6ZU64 1925 aaKnown RBP20.03■□□□□ 0.8
SEC13-209ENST00000397117 EIF2AK4Q9P2K8 1649 aaKnown RBP20.01■□□□□ 0.79
SEC13-209ENST00000397117 ERVK-7P63135 1459 aa20.01■□□□□ 0.79
SEC13-209ENST00000397117 MROH1Q8NDA8 1641 aa20.01■□□□□ 0.79
SEC13-209ENST00000397117 FGD6Q6ZV73 1430 aa20■□□□□ 0.79
SEC13-209ENST00000397117 LRRC7Q96NW7 1537 aa19.98■□□□□ 0.79
SEC13-209ENST00000397117 FAM50AQ14320 339 aaKnown RBP19.98■□□□□ 0.79
SEC13-209ENST00000397117 CEP152O94986 1710 aa19.97■□□□□ 0.79
SEC13-209ENST00000397117 UBR1Q8IWV7 1749 aa19.97■□□□□ 0.79
SEC13-209ENST00000397117 SYNMO15061 1565 aa19.93■□□□□ 0.78
SEC13-209ENST00000397117 DUOX2Q9NRD8 1548 aa19.93■□□□□ 0.78
SEC13-209ENST00000397117 ARHGAP23Q9P227 1491 aa19.91■□□□□ 0.78
SEC13-209ENST00000397117 SCAF11Q99590 1463 aaKnown RBP19.91■□□□□ 0.78
SEC13-209ENST00000397117 LTKP29376 864 aa19.91■□□□□ 0.78
SEC13-209ENST00000397117 PTPN23Q9H3S7 1636 aa19.9■□□□□ 0.78
SEC13-209ENST00000397117 SLIT1O75093 1534 aa19.9■□□□□ 0.78
SEC13-209ENST00000397117 ARHGAP31Q2M1Z3 1444 aa19.9■□□□□ 0.78
SEC13-209ENST00000397117 ITGAEP38570 1179 aa19.89■□□□□ 0.77
SEC13-209ENST00000397117 TXNDC2Q86VQ3 553 aa19.88■□□□□ 0.77
SEC13-209ENST00000397117 XIRP1Q702N8 1843 aaKnown RBP19.88■□□□□ 0.77
SEC13-209ENST00000397117 PRDM15P57071 1507 aaPredicted RBP19.87■□□□□ 0.77
SEC13-209ENST00000397117 PHF23Q9BUL5 403 aaPredicted RBP19.87■□□□□ 0.77
SEC13-209ENST00000397117 KIF15Q9NS87 1388 aa19.85■□□□□ 0.77
SEC13-209ENST00000397117 ABCC5O15440 1437 aa19.85■□□□□ 0.77
SEC13-209ENST00000397117 CROCC2H7BZ55 1655 aa19.85■□□□□ 0.77
SEC13-209ENST00000397117 SENP3Q9H4L4 574 aaPredicted RBP19.84■□□□□ 0.77
SEC13-209ENST00000397117 ERBINQ96RT1 1412 aa19.84■□□□□ 0.77
SEC13-209ENST00000397117 RRP7BPQ9NSQ0 103 aa19.84■□□□□ 0.77
SEC13-209ENST00000397117 PIK3C2BO00750 1634 aa19.83■□□□□ 0.76
SEC13-209ENST00000397117 EID1Q9Y6B2 187 aa19.82■□□□□ 0.76
SEC13-209ENST00000397117 TMEM2Q9UHN6 1383 aa19.8■□□□□ 0.76
SEC13-209ENST00000397117 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.8■□□□□ 0.76
SEC13-209ENST00000397117 KDM5AP29375 1690 aaKnown RBP19.79■□□□□ 0.76
SEC13-209ENST00000397117 RGS17Q9UGC6 210 aaPredicted RBP19.78■□□□□ 0.76
SEC13-209ENST00000397117 DAPK1P53355 1430 aa19.78■□□□□ 0.76
SEC13-209ENST00000397117 IDI1Q13907 227 aa19.77■□□□□ 0.76
SEC13-209ENST00000397117 KANK1Q14678 1352 aa19.77■□□□□ 0.76
SEC13-209ENST00000397117 LMTK2Q8IWU2 1503 aa19.77■□□□□ 0.75
SEC13-209ENST00000397117 FAM135BQ49AJ0 1406 aa19.76■□□□□ 0.75
SEC13-209ENST00000397117 TET3O43151 1660 aa19.75■□□□□ 0.75
SEC13-209ENST00000397117 STAG3Q9UJ98 1225 aa19.75■□□□□ 0.75
SEC13-209ENST00000397117 EFCAB6Q5THR3 1501 aa19.75■□□□□ 0.75
SEC13-209ENST00000397117 KCNA6P17658 529 aa19.74■□□□□ 0.75
SEC13-209ENST00000397117 TMEM94Q12767 1356 aa19.72■□□□□ 0.75
SEC13-209ENST00000397117 ANKRD30AQ9BXX3 1397 aa19.72■□□□□ 0.75
SEC13-209ENST00000397117 NOS1P29475 1434 aa19.71■□□□□ 0.75
SEC13-209ENST00000397117 CHIC2Q9UKJ5 165 aa19.71■□□□□ 0.75
SEC13-209ENST00000397117 SLC26A8Q96RN1 970 aa19.7■□□□□ 0.74
SEC13-209ENST00000397117 PROSER2Q86WR7 435 aaPredicted RBP19.69■□□□□ 0.74
SEC13-209ENST00000397117 ROBO1Q9Y6N7 1651 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms