RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 UNC13BO14795 1591 aa19.87■□□□□ 0.77
MCF2L-209ENST00000397036 EIF2AK4Q9P2K8 1649 aaKnown RBP19.86■□□□□ 0.77
MCF2L-209ENST00000397036 KIF3BO15066 747 aa19.84■□□□□ 0.77
MCF2L-209ENST00000397036 ANKRD30BQ9BXX2 1392 aa19.84■□□□□ 0.77
MCF2L-209ENST00000397036 DIP2CQ9Y2E4 1556 aa19.82■□□□□ 0.76
MCF2L-209ENST00000397036 PKD2Q13563 968 aa19.82■□□□□ 0.76
MCF2L-209ENST00000397036 ABCA6Q8N139 1617 aa19.82■□□□□ 0.76
MCF2L-209ENST00000397036 ATP10AO60312 1499 aa19.82■□□□□ 0.76
MCF2L-209ENST00000397036 YEATS2Q9ULM3 1422 aa19.82■□□□□ 0.76
MCF2L-209ENST00000397036 FAM135AQ9P2D6 1515 aa19.81■□□□□ 0.76
MCF2L-209ENST00000397036 BCORL1Q5H9F3 1711 aa19.81■□□□□ 0.76
MCF2L-209ENST00000397036 DEPDC5O75140 1603 aa19.8■□□□□ 0.76
MCF2L-209ENST00000397036 KANK1Q14678 1352 aa19.8■□□□□ 0.76
MCF2L-209ENST00000397036 REREQ9P2R6 1566 aa19.8■□□□□ 0.76
MCF2L-209ENST00000397036 IQGAP3Q86VI3 1631 aa19.79■□□□□ 0.76
MCF2L-209ENST00000397036 VWDEQ8N2E2 1590 aa19.78■□□□□ 0.76
MCF2L-209ENST00000397036 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.78■□□□□ 0.764e-9■□□□□ 9.3
MCF2L-209ENST00000397036 SIN3AQ96ST3 1273 aa19.77■□□□□ 0.76
MCF2L-209ENST00000397036 AGLP35573 1532 aa19.76■□□□□ 0.75
MCF2L-209ENST00000397036 PRDM15P57071 1507 aaPredicted RBP19.76■□□□□ 0.75
MCF2L-209ENST00000397036 RNF17Q9BXT8 1623 aaKnown RBP19.76■□□□□ 0.75
MCF2L-209ENST00000397036 PPP6R1Q9UPN7 881 aa19.76■□□□□ 0.75
MCF2L-209ENST00000397036 FOXD1Q16676 465 aa19.74■□□□□ 0.75
MCF2L-209ENST00000397036 LMTK2Q8IWU2 1503 aa19.73■□□□□ 0.75
MCF2L-209ENST00000397036 MROH1Q8NDA8 1641 aa19.73■□□□□ 0.75
MCF2L-209ENST00000397036 NEUROD1Q13562 356 aa19.71■□□□□ 0.75
MCF2L-209ENST00000397036 ARHGEF40Q8TER5 1519 aa19.71■□□□□ 0.74
MCF2L-209ENST00000397036 RPRD2Q5VT52 1461 aaKnown RBP19.7■□□□□ 0.74
MCF2L-209ENST00000397036 GGT6Q6P531 493 aa19.69■□□□□ 0.74
MCF2L-209ENST00000397036 TET3O43151 1660 aa19.67■□□□□ 0.74
MCF2L-209ENST00000397036 PTPRTO14522 1441 aa19.66■□□□□ 0.74
MCF2L-209ENST00000397036 PLA2R1Q13018 1463 aa19.66■□□□□ 0.74
MCF2L-209ENST00000397036 WASHC2CQ9Y4E1 1318 aa19.65■□□□□ 0.74
MCF2L-209ENST00000397036 TONSLQ96HA7 1378 aa19.65■□□□□ 0.74
MCF2L-209ENST00000397036 PPP1R15AO75807 674 aaPredicted RBP19.65■□□□□ 0.74
MCF2L-209ENST00000397036 ARHGAP31Q2M1Z3 1444 aa19.64■□□□□ 0.73
MCF2L-209ENST00000397036 ABCC3O15438 1527 aa19.62■□□□□ 0.73
MCF2L-209ENST00000397036 EFCAB6Q5THR3 1501 aa19.61■□□□□ 0.73
MCF2L-209ENST00000397036 CCDC144AA2RUR9 1427 aa19.6■□□□□ 0.73
MCF2L-209ENST00000397036 E9PCH4 1651 aa19.58■□□□□ 0.73
MCF2L-209ENST00000397036 L3MBTL2Q969R5 705 aa19.57■□□□□ 0.72
MCF2L-209ENST00000397036 ZC3H13Q5T200 1668 aaKnown RBP19.57■□□□□ 0.72
MCF2L-209ENST00000397036 NPATQ14207 1427 aa19.57■□□□□ 0.72
MCF2L-209ENST00000397036 TRPM2O94759 1503 aa19.56■□□□□ 0.72
MCF2L-209ENST00000397036 NOS1P29475 1434 aa19.53■□□□□ 0.72
MCF2L-209ENST00000397036 CNTLNQ9NXG0 1405 aa19.53■□□□□ 0.72
MCF2L-209ENST00000397036 STAC3Q96MF2 364 aa19.52■□□□□ 0.72
MCF2L-209ENST00000397036 CEP152O94986 1710 aa19.52■□□□□ 0.71
MCF2L-209ENST00000397036 SIGLEC1Q9BZZ2 1709 aa19.51■□□□□ 0.71
MCF2L-209ENST00000397036 NEURL4Q96JN8 1562 aa19.51■□□□□ 0.71
MCF2L-209ENST00000397036 CAMSAP1Q5T5Y3 1602 aa19.5■□□□□ 0.71
MCF2L-209ENST00000397036 ARID4BQ4LE39 1312 aaPredicted RBP19.49■□□□□ 0.71
MCF2L-209ENST00000397036 SPHKAPQ2M3C7 1700 aa19.49■□□□□ 0.71
MCF2L-209ENST00000397036 SLC52A1Q9NWF4 448 aa19.48■□□□□ 0.71
MCF2L-209ENST00000397036 SPATA31E1Q6ZUB1 1445 aa19.48■□□□□ 0.71
MCF2L-209ENST00000397036 ESF1Q9H501 851 aaKnown RBP19.46■□□□□ 0.71
MCF2L-209ENST00000397036 MLECQ14165 292 aa19.46■□□□□ 0.71
MCF2L-209ENST00000397036 UHRF1BP1Q6BDS2 1440 aa19.45■□□□□ 0.7
MCF2L-209ENST00000397036 ZMYM3Q14202 1370 aa19.44■□□□□ 0.7
MCF2L-209ENST00000397036 CLTCL1P53675 1640 aa19.42■□□□□ 0.7
MCF2L-209ENST00000397036 DCAF11Q8TEB1 546 aa19.41■□□□□ 0.7
MCF2L-209ENST00000397036 ERVK-7P63135 1459 aa19.4■□□□□ 0.7
MCF2L-209ENST00000397036 NBPF8Q3BBV2 869 aa19.4■□□□□ 0.7
MCF2L-209ENST00000397036 RGL3Q3MIN7 710 aa19.4■□□□□ 0.7
MCF2L-209ENST00000397036 RPGRIP1LQ68CZ1 1315 aa19.39■□□□□ 0.69
MCF2L-209ENST00000397036 ZNF316A6NFI3 1004 aaPredicted RBP19.38■□□□□ 0.69
MCF2L-209ENST00000397036 IDI1Q13907 227 aa19.38■□□□□ 0.69
MCF2L-209ENST00000397036 FBXO31Q5XUX0 539 aaPredicted RBP19.38■□□□□ 0.69
MCF2L-209ENST00000397036 CLTCQ00610 1675 aaKnown RBP19.37■□□□□ 0.69
MCF2L-209ENST00000397036 PIK3C2BO00750 1634 aa19.37■□□□□ 0.69
MCF2L-209ENST00000397036 SYNMO15061 1565 aa19.37■□□□□ 0.69
MCF2L-209ENST00000397036 SPATA31D1Q6ZQQ2 1576 aa19.37■□□□□ 0.69
MCF2L-209ENST00000397036 MROH2AA6NES4 1674 aa19.35■□□□□ 0.69
MCF2L-209ENST00000397036 PREX1Q8TCU6 1659 aa19.35■□□□□ 0.69
MCF2L-209ENST00000397036 UGGT1Q9NYU2 1555 aa19.34■□□□□ 0.69
MCF2L-209ENST00000397036 ADGRB3O60242 1522 aa19.34■□□□□ 0.69
MCF2L-209ENST00000397036 PRAG1Q86YV5 1406 aa19.34■□□□□ 0.69
MCF2L-209ENST00000397036 KDM2AQ9Y2K7 1162 aa19.33■□□□□ 0.68
MCF2L-209ENST00000397036 CFAP65Q6ZU64 1925 aaKnown RBP19.32■□□□□ 0.68
MCF2L-209ENST00000397036 KIF1BO60333 1816 aa19.32■□□□□ 0.68
MCF2L-209ENST00000397036 MYOM2P54296 1465 aa19.3■□□□□ 0.68
MCF2L-209ENST00000397036 RALGAPBQ86X10 1494 aa19.3■□□□□ 0.68
MCF2L-209ENST00000397036 TNRQ92752 1358 aa19.29■□□□□ 0.68
MCF2L-209ENST00000397036 GPRASP1Q5JY77 1395 aa19.27■□□□□ 0.68
MCF2L-209ENST00000397036 CHGAP10645 457 aaKnown RBP19.27■□□□□ 0.68
MCF2L-209ENST00000397036 ZFYVE9O95405 1425 aa19.27■□□□□ 0.68
MCF2L-209ENST00000397036 EIF4G2P78344 907 aaKnown RBP eCLIP19.26■□□□□ 0.67
MCF2L-209ENST00000397036 ZNF326Q5BKZ1 582 aaKnown RBP19.26■□□□□ 0.67
MCF2L-209ENST00000397036 NRXN1Q9ULB1 1477 aa19.26■□□□□ 0.67
MCF2L-209ENST00000397036 VGFO15240 615 aaPredicted RBP19.25■□□□□ 0.67
MCF2L-209ENST00000397036 ADAMTSL3P82987 1691 aa19.24■□□□□ 0.67
MCF2L-209ENST00000397036 NLRP1Q9C000 1473 aa19.24■□□□□ 0.67
MCF2L-209ENST00000397036 TMEM131LA2VDJ0 1609 aa19.23■□□□□ 0.67
MCF2L-209ENST00000397036 FER1L4A9Z1Z3 1794 aa19.23■□□□□ 0.67
MCF2L-209ENST00000397036 CEBPAP49715 358 aaPredicted RBP19.21■□□□□ 0.67
MCF2L-209ENST00000397036 STAG3Q9UJ98 1225 aa19.21■□□□□ 0.67
MCF2L-209ENST00000397036 A2ML1A8K2U0 1454 aa19.21■□□□□ 0.67
MCF2L-209ENST00000397036 CARD11Q9BXL7 1154 aa19.2■□□□□ 0.66
MCF2L-209ENST00000397036 ADGRF5Q8IZF2 1346 aa19.2■□□□□ 0.66
MCF2L-209ENST00000397036 ROCK2O75116 1388 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms