RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 NUTM2FA1L443 756 aa20.38■□□□□ 0.85
MCF2L-205ENST00000397017 CCDC141Q6ZP82 1450 aa20.37■□□□□ 0.85
MCF2L-205ENST00000397017 PLEKHH2Q8IVE3 1493 aa20.37■□□□□ 0.85
MCF2L-205ENST00000397017 CDCA8Q53HL2 280 aa20.37■□□□□ 0.85
MCF2L-205ENST00000397017 PANK3Q9H999 370 aa20.37■□□□□ 0.85
MCF2L-205ENST00000397017 SOX12O15370 315 aa20.35■□□□□ 0.85
MCF2L-205ENST00000397017 CANXP27824 592 aaKnown RBP20.34■□□□□ 0.85
MCF2L-205ENST00000397017 CCDC184Q52MB2 194 aa20.34■□□□□ 0.85
MCF2L-205ENST00000397017 CCDC7Q96M83 1385 aa20.34■□□□□ 0.85
MCF2L-205ENST00000397017 CD109Q6YHK3 1445 aa20.33■□□□□ 0.85
MCF2L-205ENST00000397017 C14orf37Q86TY3 774 aa20.32■□□□□ 0.84
MCF2L-205ENST00000397017 ERCC6L2Q5T890 1561 aa20.3■□□□□ 0.84
MCF2L-205ENST00000397017 ZBTB7CA1YPR0 619 aa20.29■□□□□ 0.84
MCF2L-205ENST00000397017 TRAPPC8Q9Y2L5 1435 aa20.29■□□□□ 0.84
MCF2L-205ENST00000397017 ASXL2Q76L83 1435 aa20.28■□□□□ 0.84
MCF2L-205ENST00000397017 SYCP2Q9BX26 1530 aa20.27■□□□□ 0.84
MCF2L-205ENST00000397017 ADGRL1O94910 1474 aa20.26■□□□□ 0.83
MCF2L-205ENST00000397017 NEFMP07197 916 aa20.26■□□□□ 0.83
MCF2L-205ENST00000397017 FANCAO15360 1455 aa20.26■□□□□ 0.83
MCF2L-205ENST00000397017 MINK1Q8N4C8 1332 aaPredicted RBP20.23■□□□□ 0.83
MCF2L-205ENST00000397017 KTN1Q86UP2 1357 aaKnown RBP20.23■□□□□ 0.83
MCF2L-205ENST00000397017 TCOF1Q13428 1488 aaKnown RBP20.23■□□□□ 0.83
MCF2L-205ENST00000397017 U2SURPO15042 1029 aaKnown RBP20.23■□□□□ 0.83
MCF2L-205ENST00000397017 MORC1Q86VD1 984 aa20.22■□□□□ 0.83
MCF2L-205ENST00000397017 CCDC136Q96JN2 1154 aa20.22■□□□□ 0.83
MCF2L-205ENST00000397017 PLCH2O75038 1416 aa20.22■□□□□ 0.83
MCF2L-205ENST00000397017 CCDC146Q8IYE0 955 aa20.2■□□□□ 0.82
MCF2L-205ENST00000397017 FBXO31Q5XUX0 539 aaPredicted RBP20.2■□□□□ 0.82
MCF2L-205ENST00000397017 B4GALNT3Q6L9W6 998 aa20.19■□□□□ 0.82
MCF2L-205ENST00000397017 VGFO15240 615 aaPredicted RBP20.18■□□□□ 0.82
MCF2L-205ENST00000397017 LMOD2Q6P5Q4 547 aa20.17■□□□□ 0.82
MCF2L-205ENST00000397017 RPRD2Q5VT52 1461 aaKnown RBP20.16■□□□□ 0.82
MCF2L-205ENST00000397017 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.16■□□□□ 0.82
MCF2L-205ENST00000397017 ABCC2Q92887 1545 aa20.15■□□□□ 0.82
MCF2L-205ENST00000397017 KDM6BO15054 1643 aa20.15■□□□□ 0.82
MCF2L-205ENST00000397017 CHD1O14646 1710 aa20.15■□□□□ 0.82
MCF2L-205ENST00000397017 RALBP1Q15311 655 aa20.13■□□□□ 0.81
MCF2L-205ENST00000397017 NLRP13Q86W25 1043 aa20.13■□□□□ 0.81
MCF2L-205ENST00000397017 WDR7Q9Y4E6 1490 aa20.12■□□□□ 0.81
MCF2L-205ENST00000397017 CNTLNQ9NXG0 1405 aa20.12■□□□□ 0.81
MCF2L-205ENST00000397017 ADGRF5Q8IZF2 1346 aa20.12■□□□□ 0.81
MCF2L-205ENST00000397017 CABP2Q9NPB3 220 aa20.12■□□□□ 0.81
MCF2L-205ENST00000397017 CFAP53Q96M91 514 aa20.11■□□□□ 0.81
MCF2L-205ENST00000397017 NPM2Q86SE8 214 aaKnown RBP20.1■□□□□ 0.81
MCF2L-205ENST00000397017 LAS1LQ9Y4W2 734 aaKnown RBP20.1■□□□□ 0.81
MCF2L-205ENST00000397017 EIF3AQ14152 1382 aaKnown RBP20.09■□□□□ 0.81
MCF2L-205ENST00000397017 IDI1Q13907 227 aa20.08■□□□□ 0.8
MCF2L-205ENST00000397017 SLC12A5Q9H2X9 1139 aa20.08■□□□□ 0.8
MCF2L-205ENST00000397017 ABCA8O94911 1581 aa20.08■□□□□ 0.8
MCF2L-205ENST00000397017 CENPJQ9HC77 1338 aaPredicted RBP20.08■□□□□ 0.8
MCF2L-205ENST00000397017 PZPP20742 1482 aa20.08■□□□□ 0.8
MCF2L-205ENST00000397017 RRP7AQ9Y3A4 280 aaKnown RBP20.08■□□□□ 0.8
MCF2L-205ENST00000397017 CEBPAP49715 358 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-205ENST00000397017 ERBINQ96RT1 1412 aa20.07■□□□□ 0.8
MCF2L-205ENST00000397017 MYBBP1AQ9BQG0 1328 aaKnown RBP20.06■□□□□ 0.8
MCF2L-205ENST00000397017 U2AF1L5P0DN76 240 aaPredicted RBP20.06■□□□□ 0.8
MCF2L-205ENST00000397017 U2AF1Q01081 240 aaKnown RBP eCLIP20.06■□□□□ 0.8
MCF2L-205ENST00000397017 HDGFP51858 240 aaKnown RBP20.05■□□□□ 0.8
MCF2L-205ENST00000397017 ABCC10Q5T3U5 1492 aa20.05■□□□□ 0.8
MCF2L-205ENST00000397017 DNMT1P26358 1616 aaKnown RBP20.05■□□□□ 0.8
MCF2L-205ENST00000397017 ITSN2Q9NZM3 1697 aa20.05■□□□□ 0.8
MCF2L-205ENST00000397017 DHX29Q7Z478 1369 aaKnown RBP20.04■□□□□ 0.8
MCF2L-205ENST00000397017 FRAT1Q92837 279 aaPredicted RBP20.03■□□□□ 0.8
MCF2L-205ENST00000397017 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.02■□□□□ 0.79
MCF2L-205ENST00000397017 MBD5Q9P267 1494 aa20■□□□□ 0.79
MCF2L-205ENST00000397017 HDGFL2Q7Z4V5 671 aaPredicted RBP20■□□□□ 0.79
MCF2L-205ENST00000397017 PAK3O75914 559 aaPredicted RBP20■□□□□ 0.79
MCF2L-205ENST00000397017 PRAM1Q96QH2 718 aa20■□□□□ 0.79
MCF2L-205ENST00000397017 SLC26A8Q96RN1 970 aa19.99■□□□□ 0.79
MCF2L-205ENST00000397017 GGNBP2Q9H3C7 697 aa19.99■□□□□ 0.79
MCF2L-205ENST00000397017 EID1Q9Y6B2 187 aa19.99■□□□□ 0.79
MCF2L-205ENST00000397017 TXNDC2Q86VQ3 553 aa19.98■□□□□ 0.79
MCF2L-205ENST00000397017 FAM135AQ9P2D6 1515 aa19.98■□□□□ 0.79
MCF2L-205ENST00000397017 DENND4BO75064 1496 aaPredicted RBP19.98■□□□□ 0.79
MCF2L-205ENST00000397017 LRRIQ1Q96JM4 1722 aa19.98■□□□□ 0.79
MCF2L-205ENST00000397017 MAPK8IP3Q9UPT6 1336 aa19.97■□□□□ 0.79
MCF2L-205ENST00000397017 DAXXQ9UER7 740 aaPredicted RBP19.97■□□□□ 0.79
MCF2L-205ENST00000397017 NUDCQ9Y266 331 aa19.97■□□□□ 0.79
MCF2L-205ENST00000397017 EVC2Q86UK5 1308 aa19.97■□□□□ 0.79
MCF2L-205ENST00000397017 PLIN1O60240 522 aa19.96■□□□□ 0.79
MCF2L-205ENST00000397017 KDM5BQ9UGL1 1544 aa19.95■□□□□ 0.78
MCF2L-205ENST00000397017 APAF1O14727 1248 aa19.95■□□□□ 0.78
MCF2L-205ENST00000397017 TTC37Q6PGP7 1564 aa19.94■□□□□ 0.78
MCF2L-205ENST00000397017 TERF2IPQ9NYB0 399 aa19.94■□□□□ 0.78
MCF2L-205ENST00000397017 WAPLQ7Z5K2 1190 aa19.94■□□□□ 0.78
MCF2L-205ENST00000397017 ADAMTS8Q9UP79 889 aa19.94■□□□□ 0.78
MCF2L-205ENST00000397017 CDCA7LQ96GN5 454 aa19.93■□□□□ 0.78
MCF2L-205ENST00000397017 SLC52A1Q9NWF4 448 aa19.92■□□□□ 0.78
MCF2L-205ENST00000397017 RCAN3Q9UKA8 241 aa19.92■□□□□ 0.78
MCF2L-205ENST00000397017 CFAP65Q6ZU64 1925 aaKnown RBP19.91■□□□□ 0.78
MCF2L-205ENST00000397017 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.9■□□□□ 0.78
MCF2L-205ENST00000397017 RBM33Q96EV2 1170 aaKnown RBP19.9■□□□□ 0.78
MCF2L-205ENST00000397017 PPP4R2Q9NY27 417 aa19.9■□□□□ 0.78
MCF2L-205ENST00000397017 DISP3Q9P2K9 1392 aa19.9■□□□□ 0.78
MCF2L-205ENST00000397017 ARHGEF12Q9NZN5 1544 aa19.9■□□□□ 0.78
MCF2L-205ENST00000397017 NGDNQ8NEJ9 315 aaKnown RBP19.9■□□□□ 0.78
MCF2L-205ENST00000397017 NOS1P29475 1434 aa19.89■□□□□ 0.78
MCF2L-205ENST00000397017 A2MP01023 1474 aa19.89■□□□□ 0.77
MCF2L-205ENST00000397017 DUOX2Q9NRD8 1548 aa19.89■□□□□ 0.77
MCF2L-205ENST00000397017 ADGRL2O95490 1459 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms