RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 CFDP1Q9UEE9 299 aaPredicted RBP13.08□□□□□ -0.32
NUP98-206ENST00000397013 SETD1BQ9UPS6 1966 aaKnown RBP13.07□□□□□ -0.32
NUP98-206ENST00000397013 CAMSAP1Q5T5Y3 1602 aa13.07□□□□□ -0.32
NUP98-206ENST00000397013 PREX2Q70Z35 1606 aa13.07□□□□□ -0.32
NUP98-206ENST00000397013 CNTLNQ9NXG0 1405 aa13.06□□□□□ -0.32
NUP98-206ENST00000397013 ITSN2Q9NZM3 1697 aa13.06□□□□□ -0.32
NUP98-206ENST00000397013 SYCP2Q9BX26 1530 aa13.06□□□□□ -0.32
NUP98-206ENST00000397013 CCDC18Q5T9S5 1454 aa13.05□□□□□ -0.32
NUP98-206ENST00000397013 FBXO31Q5XUX0 539 aaPredicted RBP13.05□□□□□ -0.32
NUP98-206ENST00000397013 NPATQ14207 1427 aa13.04□□□□□ -0.32
NUP98-206ENST00000397013 PTPRKQ15262 1439 aa13.04□□□□□ -0.32
NUP98-206ENST00000397013 CDC42BPAQ5VT25 1732 aa13.03□□□□□ -0.32
NUP98-206ENST00000397013 PROM2Q8N271 834 aa13.03□□□□□ -0.32
NUP98-206ENST00000397013 CCNB3Q8WWL7 1395 aa13.03□□□□□ -0.32
NUP98-206ENST00000397013 A2MP01023 1474 aa13.03□□□□□ -0.32
NUP98-206ENST00000397013 PKD2Q13563 968 aa13.02□□□□□ -0.33
NUP98-206ENST00000397013 KIAA1107Q9UPP5 1409 aa13.01□□□□□ -0.33
NUP98-206ENST00000397013 FYCO1Q9BQS8 1478 aa13.01□□□□□ -0.33
NUP98-206ENST00000397013 SUPT6HQ7KZ85 1726 aaKnown RBP13.01□□□□□ -0.33
NUP98-206ENST00000397013 SPATA31D1Q6ZQQ2 1576 aa13□□□□□ -0.33
NUP98-206ENST00000397013 ATP7AQ04656 1500 aa12.99□□□□□ -0.33
NUP98-206ENST00000397013 HSPA1LP34931 641 aa12.99□□□□□ -0.33
NUP98-206ENST00000397013 PIP4K2BP78356 416 aa12.99□□□□□ -0.33
NUP98-206ENST00000397013 FBXO3Q9UK99 471 aa12.99□□□□□ -0.33
NUP98-206ENST00000397013 MTUS2Q5JR59 1369 aa12.98□□□□□ -0.33
NUP98-206ENST00000397013 CLTCQ00610 1675 aaKnown RBP12.98□□□□□ -0.33
NUP98-206ENST00000397013 TCOF1Q13428 1488 aaKnown RBP12.97□□□□□ -0.33
NUP98-206ENST00000397013 IQSEC2Q5JU85 1478 aa12.97□□□□□ -0.33
NUP98-206ENST00000397013 MBD5Q9P267 1494 aa12.97□□□□□ -0.33
NUP98-206ENST00000397013 KIF3BO15066 747 aa12.97□□□□□ -0.33
NUP98-206ENST00000397013 PLXNC1O60486 1568 aa12.96□□□□□ -0.33
NUP98-206ENST00000397013 DHX29Q7Z478 1369 aaKnown RBP12.95□□□□□ -0.34
NUP98-206ENST00000397013 INO80Q9ULG1 1556 aaPredicted RBP12.94□□□□□ -0.34
NUP98-206ENST00000397013 PLA2R1Q13018 1463 aa12.94□□□□□ -0.34
NUP98-206ENST00000397013 PLEKHH2Q8IVE3 1493 aa12.94□□□□□ -0.34
NUP98-206ENST00000397013 CEP170BQ9Y4F5 1589 aaPredicted RBP12.94□□□□□ -0.34
NUP98-206ENST00000397013 MROH2AA6NES4 1674 aa12.93□□□□□ -0.34
NUP98-206ENST00000397013 MYO3AQ8NEV4 1616 aa12.93□□□□□ -0.34
NUP98-206ENST00000397013 TNRQ92752 1358 aa12.93□□□□□ -0.34
NUP98-206ENST00000397013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.93□□□□□ -0.34
NUP98-206ENST00000397013 A2ML1A8K2U0 1454 aa12.91□□□□□ -0.34
NUP98-206ENST00000397013 WASHC2CQ9Y4E1 1318 aa12.91□□□□□ -0.34
NUP98-206ENST00000397013 SPDYE2BA6NHP3 402 aa12.9□□□□□ -0.34
NUP98-206ENST00000397013 SPDYE6P0CI01 402 aa12.9□□□□□ -0.34
NUP98-206ENST00000397013 SPDYE2Q495Y8 402 aa12.9□□□□□ -0.34
NUP98-206ENST00000397013 AMER1Q5JTC6 1135 aaPredicted RBP12.9□□□□□ -0.34
NUP98-206ENST00000397013 DNMT1P26358 1616 aaKnown RBP12.9□□□□□ -0.34
NUP98-206ENST00000397013 TIAM1Q13009 1591 aa12.9□□□□□ -0.35
NUP98-206ENST00000397013 RTEL1-TNFRSF6BF6WH68 1400 aa12.89□□□□□ -0.35
NUP98-206ENST00000397013 TOM1O60784 492 aa12.89□□□□□ -0.35
NUP98-206ENST00000397013 ANKLE2Q86XL3 938 aa12.89□□□□□ -0.35
NUP98-206ENST00000397013 SHANK2Q9UPX8 1470 aa12.88□□□□□ -0.35
NUP98-206ENST00000397013 CEP162Q5TB80 1403 aa12.88□□□□□ -0.35
NUP98-206ENST00000397013 MIA2Q96PC5 1412 aa12.88□□□□□ -0.35
NUP98-206ENST00000397013 ZNF142P52746 1687 aaPredicted RBP12.87□□□□□ -0.35
NUP98-206ENST00000397013 THEMISQ8N1K5 641 aaPredicted RBP12.87□□□□□ -0.35
NUP98-206ENST00000397013 NEURL4Q96JN8 1562 aa12.86□□□□□ -0.35
NUP98-206ENST00000397013 PZPP20742 1482 aa12.85□□□□□ -0.35
NUP98-206ENST00000397013 NCOA2Q15596 1464 aa12.85□□□□□ -0.35
NUP98-206ENST00000397013 TSPY4P0CV99 314 aa12.84□□□□□ -0.35
NUP98-206ENST00000397013 TSPY10P0CW01 314 aa12.84□□□□□ -0.35
NUP98-206ENST00000397013 ZNF692Q9BU19 519 aaPredicted RBP12.84□□□□□ -0.35
NUP98-206ENST00000397013 CAMSAP2Q08AD1 1489 aa12.84□□□□□ -0.35
NUP98-206ENST00000397013 NPHP4O75161 1426 aaPredicted RBP12.83□□□□□ -0.36
NUP98-206ENST00000397013 LOC105371045A0A1W2PR82 267 aa12.83□□□□□ -0.36
NUP98-206ENST00000397013 KANK4Q5T7N3 995 aaPredicted RBP12.83□□□□□ -0.36
NUP98-206ENST00000397013 ALKQ9UM73 1620 aa12.83□□□□□ -0.36
NUP98-206ENST00000397013 CCDC141Q6ZP82 1450 aa12.83□□□□□ -0.36
NUP98-206ENST00000397013 ADGBQ8N7X0 1667 aa12.83□□□□□ -0.36
NUP98-206ENST00000397013 VWDEQ8N2E2 1590 aa12.82□□□□□ -0.36
NUP98-206ENST00000397013 RSPH4AQ5TD94 716 aa12.82□□□□□ -0.36
NUP98-206ENST00000397013 EHBP1L1Q8N3D4 1523 aa12.82□□□□□ -0.36
NUP98-206ENST00000397013 LTKP29376 864 aa12.81□□□□□ -0.36
NUP98-206ENST00000397013 KDM5DQ9BY66 1539 aa12.81□□□□□ -0.36
NUP98-206ENST00000397013 MED1Q15648 1581 aaPredicted RBP12.81□□□□□ -0.36
NUP98-206ENST00000397013 CPS1P31327 1500 aa12.8□□□□□ -0.36
NUP98-206ENST00000397013 SSUH2Q9Y2M2 353 aa12.8□□□□□ -0.36
NUP98-206ENST00000397013 UGGT1Q9NYU2 1555 aa12.79□□□□□ -0.36
NUP98-206ENST00000397013 RGS17Q9UGC6 210 aaPredicted RBP12.78□□□□□ -0.36
NUP98-206ENST00000397013 MED14O60244 1454 aa12.78□□□□□ -0.36
NUP98-206ENST00000397013 FAM135AQ9P2D6 1515 aa12.78□□□□□ -0.36
NUP98-206ENST00000397013 NLRP1Q9C000 1473 aa12.77□□□□□ -0.37
NUP98-206ENST00000397013 LRRC7Q96NW7 1537 aa12.77□□□□□ -0.37
NUP98-206ENST00000397013 TXNDC2Q86VQ3 553 aa12.76□□□□□ -0.37
NUP98-206ENST00000397013 RBM33Q96EV2 1170 aaKnown RBP12.76□□□□□ -0.37
NUP98-206ENST00000397013 ABCC3O15438 1527 aa12.75□□□□□ -0.37
NUP98-206ENST00000397013 ERVK-7P63135 1459 aa12.74□□□□□ -0.37
NUP98-206ENST00000397013 RRP7BPQ9NSQ0 103 aa12.74□□□□□ -0.37
NUP98-206ENST00000397013 RTN4Q9NQC3 1192 aaKnown RBP12.73□□□□□ -0.37
NUP98-206ENST00000397013 STRCP1A6NGW2 1772 aa12.73□□□□□ -0.37
NUP98-206ENST00000397013 POLR1AO95602 1720 aaPredicted RBP12.73□□□□□ -0.37
NUP98-206ENST00000397013 LRRC9Q6ZRR7 1453 aa12.72□□□□□ -0.37
NUP98-206ENST00000397013 ARHGEF5Q12774 1597 aa12.72□□□□□ -0.37
NUP98-206ENST00000397013 DEPDC5O75140 1603 aa12.7□□□□□ -0.38
NUP98-206ENST00000397013 VASPP50552 380 aaPredicted RBP12.7□□□□□ -0.38
NUP98-206ENST00000397013 MROH1Q8NDA8 1641 aa12.7□□□□□ -0.38
NUP98-206ENST00000397013 IDI1Q13907 227 aa12.69□□□□□ -0.38
NUP98-206ENST00000397013 POTEAQ6S8J7 498 aa12.69□□□□□ -0.38
NUP98-206ENST00000397013 SLC26A8Q96RN1 970 aa12.69□□□□□ -0.38
NUP98-206ENST00000397013 CHIC2Q9UKJ5 165 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms